DREB2-3, JQ669818.1-DREB2-3.m1 (mRNA) Malus x domestica

Transcript Overview
NameDREB2-3
Unique NameJQ669818.1-DREB2-3.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
DREB2-3DREB2-3Malus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JQ669818.1-DREB2-3.m1-cds1JQ669818.1-DREB2-3.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
DREB2-3JQ669818.1-DREB2-3.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI386646580
nuccoreJQ669818.1
Alignments
Feature NameTypeLocationAnalysis
JQ669818 region JQ669818:1..1260+ NCBI Rosaceae gene and mRNA sequences
Chr12 chromosome Chr12:25979978..25981671- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr12 chromosome chr12:25157603..25159296+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
Properties
Property NameValue
Productdehydration-responsive element-binding protein (DREB2)
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>JQ669818.1-DREB2-3.m1 ID=JQ669818.1-DREB2-3.m1|Name=DREB2-3|organism=Malus x domestica|type=mRNA|length=1260bp
atggcgtccgaggcttccgacggggataggaaattgcggaagaggcgcta
cgggtgcgattcgatagaggacactctggctaggtggaagaactacaatg
agaggcttgattttgaaaaagatggagggaagaagactcggagggttccc
gcgaagggctccacaaaagggtgtatgagagggaaaggagggcctgagaa
ctccgcttgtgtttacaggggtgttaggcagaggacttggggaaaatggg
tggcggaaatccgagaaccgattcacgctacaggcggcgctgtaccgaag
aagaagaataaccgtctttggcttgggactttccctacagcctgggaagc
tgcacttgcttatgataaagctgcttgggcaatttatggtgcttcggccc
ggctcaacttcgcaaagaacaccatggatttgaaggactcctgctctaat
tttgtgtcacccacaacgactaaaccatcgtcctacgagtcatcgtcaac
atataacagtgcggatcaggcaaaggaaagatcgggtttctttgaggact
gtctgcccggagagccgaagcaggaaatggtttgtgctgtgggattggtg
actgaggaattagagctttccaatgctaccttaagagacggttgcaaccc
ttcaaatgatgtcaaatttgagacaccggcaatgagggaagcagtggtga
aagagttcccggtgattctggaatctggaagccaaaatggcttagatgat
atgtacaacaatatgcataacgagcagaaaaatgttcaatctgatgatgc
tggaatgaagggatcgataactggtcaacaattgcagggaggtttagcag
aaactacgaaattaaatggccataatcacgatggcttcatacatacttat
gcttacttagatgacttagacgataagtacaacaatagtccaggttatgg
catcaatgcatcgaatgacatcggaatgcagagggagctctacgacagac
ttgactacatgcataactgctggtctgcagaaaaaacctatggcattgat
gctgctcaagaacaacaatgggagaggatgatgcattgtctccctataca
atttcagacacaaccacaagtcgacatacctggaagctcgaatcatacgc
aggacggatatttagacgtggatttcgattcagatttagttagacaaagc
tatcattccggtgtaatggaagagcaggggctgcattattcatggttccc
ttactcttag
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protein sequence of DREB2-3

>JQ669818.1-DREB2-3.p1 ID=JQ669818.1-DREB2-3.p1|Name=DREB2-3|organism=Malus x domestica|type=polypeptide|length=419bp
MASEASDGDRKLRKRRYGCDSIEDTLARWKNYNERLDFEKDGGKKTRRVP
AKGSTKGCMRGKGGPENSACVYRGVRQRTWGKWVAEIREPIHATGGAVPK
KKNNRLWLGTFPTAWEAALAYDKAAWAIYGASARLNFAKNTMDLKDSCSN
FVSPTTTKPSSYESSSTYNSADQAKERSGFFEDCLPGEPKQEMVCAVGLV
TEELELSNATLRDGCNPSNDVKFETPAMREAVVKEFPVILESGSQNGLDD
MYNNMHNEQKNVQSDDAGMKGSITGQQLQGGLAETTKLNGHNHDGFIHTY
AYLDDLDDKYNNSPGYGINASNDIGMQRELYDRLDYMHNCWSAEKTYGID
AAQEQQWERMMHCLPIQFQTQPQVDIPGSSNHTQDGYLDVDFDSDLVRQS
YHSGVMEEQGLHYSWFPYS
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mRNA from alignment at JQ669818:1..1260+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JQ669818.1-DREB2-3.m1 ID=JQ669818.1-DREB2-3.m1|Name=DREB2-3|organism=Malus x domestica|type=mRNA|length=1260bp|location=Sequence derived from alignment at JQ669818:1..1260+ (Malus x domestica)
atggcgtccgaggcttccgacggggataggaaattgcggaagaggcgcta cgggtgcgattcgatagaggacactctggctaggtggaagaactacaatg agaggcttgattttgaaaaagatggagggaagaagactcggagggttccc gcgaagggctccacaaaagggtgtatgagagggaaaggagggcctgagaa ctccgcttgtgtttacaggggtgttaggcagaggacttggggaaaatggg tggcggaaatccgagaaccgattcacgctacaggcggcgctgtaccgaag aagaagaataaccgtctttggcttgggactttccctacagcctgggaagc tgcacttgcttatgataaagctgcttgggcaatttatggtgcttcggccc ggctcaacttcgcaaagaacaccatggatttgaaggactcctgctctaat tttgtgtcacccacaacgactaaaccatcgtcctacgagtcatcgtcaac atataacagtgcggatcaggcaaaggaaagatcgggtttctttgaggact gtctgcccggagagccgaagcaggaaatggtttgtgctgtgggattggtg actgaggaattagagctttccaatgctaccttaagagacggttgcaaccc ttcaaatgatgtcaaatttgagacaccggcaatgagggaagcagtggtga aagagttcccggtgattctggaatctggaagccaaaatggcttagatgat atgtacaacaatatgcataacgagcagaaaaatgttcaatctgatgatgc tggaatgaagggatcgataactggtcaacaattgcagggaggtttagcag aaactacgaaattaaatggccataatcacgatggcttcatacatacttat gcttacttagatgacttagacgataagtacaacaatagtccaggttatgg catcaatgcatcgaatgacatcggaatgcagagggagctctacgacagac ttgactacatgcataactgctggtctgcagaaaaaacctatggcattgat gctgctcaagaacaacaatgggagaggatgatgcattgtctccctataca atttcagacacaaccacaagtcgacatacctggaagctcgaatcatacgc aggacggatatttagacgtggatttcgattcagatttagttagacaaagc tatcattccggtgtaatggaagagcaggggctgcattattcatggttccc ttactcttag
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Coding sequence (CDS) from alignment at JQ669818:1..1260+

>JQ669818.1-DREB2-3.m1 ID=JQ669818.1-DREB2-3.m1|Name=DREB2-3|organism=Malus x domestica|type=CDS|length=1260bp|location=Sequence derived from alignment at JQ669818:1..1260+ (Malus x domestica)
atggcgtccgaggcttccgacggggataggaaattgcggaagaggcgcta
cgggtgcgattcgatagaggacactctggctaggtggaagaactacaatg
agaggcttgattttgaaaaagatggagggaagaagactcggagggttccc
gcgaagggctccacaaaagggtgtatgagagggaaaggagggcctgagaa
ctccgcttgtgtttacaggggtgttaggcagaggacttggggaaaatggg
tggcggaaatccgagaaccgattcacgctacaggcggcgctgtaccgaag
aagaagaataaccgtctttggcttgggactttccctacagcctgggaagc
tgcacttgcttatgataaagctgcttgggcaatttatggtgcttcggccc
ggctcaacttcgcaaagaacaccatggatttgaaggactcctgctctaat
tttgtgtcacccacaacgactaaaccatcgtcctacgagtcatcgtcaac
atataacagtgcggatcaggcaaaggaaagatcgggtttctttgaggact
gtctgcccggagagccgaagcaggaaatggtttgtgctgtgggattggtg
actgaggaattagagctttccaatgctaccttaagagacggttgcaaccc
ttcaaatgatgtcaaatttgagacaccggcaatgagggaagcagtggtga
aagagttcccggtgattctggaatctggaagccaaaatggcttagatgat
atgtacaacaatatgcataacgagcagaaaaatgttcaatctgatgatgc
tggaatgaagggatcgataactggtcaacaattgcagggaggtttagcag
aaactacgaaattaaatggccataatcacgatggcttcatacatacttat
gcttacttagatgacttagacgataagtacaacaatagtccaggttatgg
catcaatgcatcgaatgacatcggaatgcagagggagctctacgacagac
ttgactacatgcataactgctggtctgcagaaaaaacctatggcattgat
gctgctcaagaacaacaatgggagaggatgatgcattgtctccctataca
atttcagacacaaccacaagtcgacatacctggaagctcgaatcatacgc
aggacggatatttagacgtggatttcgattcagatttagttagacaaagc
tatcattccggtgtaatggaagagcaggggctgcattattcatggttccc
ttactcttag
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