GAPDHB, JQ302965.1-GAPDHB.m1 (mRNA) Pyrus x bretschneideri

Transcript Overview
NameGAPDHB
Unique NameJQ302965.1-GAPDHB.m1
TypemRNA
OrganismPyrus x bretschneideri ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
GAPDHBGAPDHBPyrus x bretschneiderigene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JQ302965.1-GAPDHB.m1-cds1JQ302965.1-GAPDHB.m1-cds1Pyrus x bretschneideriCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
GAPDHBJQ302965.1-GAPDHB.p1Pyrus x bretschneideripolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI381393062
nuccoreJQ302965.1
Alignments
Feature NameTypeLocationAnalysis
JQ302965 region JQ302965:18..1376+ NCBI Rosaceae gene and mRNA sequences
scaffold00605 supercontig scaffold00605:82069..84677- Pyrus communis Genome v1.0 Draft Assembly & Annotation
Properties
Property NameValue
Productglyceraldehyde-3-phosphate dehydrogenase B
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>JQ302965.1-GAPDHB.m1 ID=JQ302965.1-GAPDHB.m1|Name=GAPDHB|organism=Pyrus x bretschneideri|type=mRNA|length=1359bp
atggcctcacacgcagctctcgcctcttcgcgagtcccggctaacaccag
gcttccctccaagccctcccactcatttcccacccaatgcttctccaaga
ggcttgaagttggtgagttttcaggactaagatcgagttcatgtgtgacc
tatgcaagcaatggcagagagcaatccttcttcgatactgtcgctgccca
gcttactcccaagactgcaggaccaactcctgtcaggggagaaacagtgg
caaaattgaaggtggcaatcaacggatttggacgtattggcagaaacttc
ctccgatgctggcatggccgcaaggactcacccctcgaagtcattgttgt
taatgacagtggtggtgtcaagaatgcttcacacttgctgaaatacgact
caatgctgggtactttcaaagcagatgtgaaaatcgttgacaatgagacc
atcagcgttgatggtaagcccgtcaaggttgtctctagcagagatcccct
gaagcttccatgggctgagatgggcattgacattgttatcgagggaacag
gagtctttgtcgatggccctggtgccggcaaacatatccaagccggtgcc
aagaaagtcatcattacagctccagcaaaaggtgctgacattcctacaca
tgttgtcggggtgaatgaaaaagactacggccacgacgttgccaacattg
taagcaatgcttcttgcaccacaaactgcctggctcctttcgtaaagatc
ctggatgaagaatttggcattgtcaagggaaccatgacaactactcattc
ctacactggagaccagaggctcttggacgcttcacaccgggacttaagga
gagccagagcggcagcactaaacatagtccccacaagcactggtgcagca
aaggctgtgtcccttgtgctgcctcaactcaaaggcaagctcaacggcat
tgccctccgtgtgccaacacctaacgtatcagtggttgaccttgtgatca
acgttgcaaagaaaggtatttcagcagaagatgtcaatgcagccttcaga
aaggcagcggacggaccacttaagggcatattggcagtgtgcgacgttcc
tcttgtgtctgtggacttcaggtgcactgatgtttcctccaccatagact
cctccttgaccatggtcatgggtgatgatatggtcaaggtggtggcctgg
tacgacaacgaatggggatacagccaaagggttgtggatttggcacattt
ggttgcaagcaagtggccaggcgcggcagtagtgggaagcggagacccat
tggaggatttctgccagacaaacccggcagacgaggagtgcaaagtctat
gaagcatag
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protein sequence of GAPDHB

>JQ302965.1-GAPDHB.p1 ID=JQ302965.1-GAPDHB.p1|Name=GAPDHB|organism=Pyrus x bretschneideri|type=polypeptide|length=452bp
MASHAALASSRVPANTRLPSKPSHSFPTQCFSKRLEVGEFSGLRSSSCVT
YASNGREQSFFDTVAAQLTPKTAGPTPVRGETVAKLKVAINGFGRIGRNF
LRCWHGRKDSPLEVIVVNDSGGVKNASHLLKYDSMLGTFKADVKIVDNET
ISVDGKPVKVVSSRDPLKLPWAEMGIDIVIEGTGVFVDGPGAGKHIQAGA
KKVIITAPAKGADIPTHVVGVNEKDYGHDVANIVSNASCTTNCLAPFVKI
LDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAA
KAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVINVAKKGISAEDVNAAFR
KAADGPLKGILAVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAW
YDNEWGYSQRVVDLAHLVASKWPGAAVVGSGDPLEDFCQTNPADEECKVY
EA
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mRNA from alignment at JQ302965:18..1376+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JQ302965.1-GAPDHB.m1 ID=JQ302965.1-GAPDHB.m1|Name=GAPDHB|organism=Pyrus x bretschneideri|type=mRNA|length=1359bp|location=Sequence derived from alignment at JQ302965:18..1376+ (Pyrus x bretschneideri)
atggcctcacacgcagctctcgcctcttcgcgagtcccggctaacaccag gcttccctccaagccctcccactcatttcccacccaatgcttctccaaga ggcttgaagttggtgagttttcaggactaagatcgagttcatgtgtgacc tatgcaagcaatggcagagagcaatccttcttcgatactgtcgctgccca gcttactcccaagactgcaggaccaactcctgtcaggggagaaacagtgg caaaattgaaggtggcaatcaacggatttggacgtattggcagaaacttc ctccgatgctggcatggccgcaaggactcacccctcgaagtcattgttgt taatgacagtggtggtgtcaagaatgcttcacacttgctgaaatacgact caatgctgggtactttcaaagcagatgtgaaaatcgttgacaatgagacc atcagcgttgatggtaagcccgtcaaggttgtctctagcagagatcccct gaagcttccatgggctgagatgggcattgacattgttatcgagggaacag gagtctttgtcgatggccctggtgccggcaaacatatccaagccggtgcc aagaaagtcatcattacagctccagcaaaaggtgctgacattcctacaca tgttgtcggggtgaatgaaaaagactacggccacgacgttgccaacattg taagcaatgcttcttgcaccacaaactgcctggctcctttcgtaaagatc ctggatgaagaatttggcattgtcaagggaaccatgacaactactcattc ctacactggagaccagaggctcttggacgcttcacaccgggacttaagga gagccagagcggcagcactaaacatagtccccacaagcactggtgcagca aaggctgtgtcccttgtgctgcctcaactcaaaggcaagctcaacggcat tgccctccgtgtgccaacacctaacgtatcagtggttgaccttgtgatca acgttgcaaagaaaggtatttcagcagaagatgtcaatgcagccttcaga aaggcagcggacggaccacttaagggcatattggcagtgtgcgacgttcc tcttgtgtctgtggacttcaggtgcactgatgtttcctccaccatagact cctccttgaccatggtcatgggtgatgatatggtcaaggtggtggcctgg tacgacaacgaatggggatacagccaaagggttgtggatttggcacattt ggttgcaagcaagtggccaggcgcggcagtagtgggaagcggagacccat tggaggatttctgccagacaaacccggcagacgaggagtgcaaagtctat gaagcatag
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Coding sequence (CDS) from alignment at JQ302965:18..1376+

>JQ302965.1-GAPDHB.m1 ID=JQ302965.1-GAPDHB.m1|Name=GAPDHB|organism=Pyrus x bretschneideri|type=CDS|length=1359bp|location=Sequence derived from alignment at JQ302965:18..1376+ (Pyrus x bretschneideri)
atggcctcacacgcagctctcgcctcttcgcgagtcccggctaacaccag
gcttccctccaagccctcccactcatttcccacccaatgcttctccaaga
ggcttgaagttggtgagttttcaggactaagatcgagttcatgtgtgacc
tatgcaagcaatggcagagagcaatccttcttcgatactgtcgctgccca
gcttactcccaagactgcaggaccaactcctgtcaggggagaaacagtgg
caaaattgaaggtggcaatcaacggatttggacgtattggcagaaacttc
ctccgatgctggcatggccgcaaggactcacccctcgaagtcattgttgt
taatgacagtggtggtgtcaagaatgcttcacacttgctgaaatacgact
caatgctgggtactttcaaagcagatgtgaaaatcgttgacaatgagacc
atcagcgttgatggtaagcccgtcaaggttgtctctagcagagatcccct
gaagcttccatgggctgagatgggcattgacattgttatcgagggaacag
gagtctttgtcgatggccctggtgccggcaaacatatccaagccggtgcc
aagaaagtcatcattacagctccagcaaaaggtgctgacattcctacaca
tgttgtcggggtgaatgaaaaagactacggccacgacgttgccaacattg
taagcaatgcttcttgcaccacaaactgcctggctcctttcgtaaagatc
ctggatgaagaatttggcattgtcaagggaaccatgacaactactcattc
ctacactggagaccagaggctcttggacgcttcacaccgggacttaagga
gagccagagcggcagcactaaacatagtccccacaagcactggtgcagca
aaggctgtgtcccttgtgctgcctcaactcaaaggcaagctcaacggcat
tgccctccgtgtgccaacacctaacgtatcagtggttgaccttgtgatca
acgttgcaaagaaaggtatttcagcagaagatgtcaatgcagccttcaga
aaggcagcggacggaccacttaagggcatattggcagtgtgcgacgttcc
tcttgtgtctgtggacttcaggtgcactgatgtttcctccaccatagact
cctccttgaccatggtcatgggtgatgatatggtcaaggtggtggcctgg
tacgacaacgaatggggatacagccaaagggttgtggatttggcacattt
ggttgcaagcaagtggccaggcgcggcagtagtgggaagcggagacccat
tggaggatttctgccagacaaacccggcagacgaggagtgcaaagtctat
gaagcatag
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