GAPDH, DQ091044.1-GAPDH.m1 (mRNA) Rosa gymnocarpa

Transcript Overview
NameGAPDH
Unique NameDQ091044.1-GAPDH.m1
TypemRNA
OrganismRosa gymnocarpa ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GAPDHDQ091044.1-GAPDHRosa gymnocarpagene


This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
GAPDHGAPDHRosa gymnocarpagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
DQ091044.1-GAPDH.m1-cds1DQ091044.1-GAPDH.m1-cds1Rosa gymnocarpaCDS
DQ091044.1-GAPDH.m1-cds2DQ091044.1-GAPDH.m1-cds2Rosa gymnocarpaCDS
DQ091044.1-GAPDH.m1-cds3DQ091044.1-GAPDH.m1-cds3Rosa gymnocarpaCDS
DQ091044.1-GAPDH.m1-cds4DQ091044.1-GAPDH.m1-cds4Rosa gymnocarpaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
GAPDHDQ091044.1-GAPDH.p1Rosa gymnocarpapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI71911801
nuccoreDQ091044.1
Alignments
Feature NameTypeLocationAnalysis
DQ091044 region DQ091044:1..674+ NCBI Rosaceae gene and mRNA sequences
Properties
Property NameValue
Productglyceraldehyde 3-phosphate dehydrogenase
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>DQ091044.1-GAPDH.m1 ID=DQ091044.1-GAPDH.m1|Name=GAPDH|organism=Rosa gymnocarpa|type=mRNA|length=355bp
gtcttatgactaccgtgcactccatcactgccacccagaagactgttgat
ggaccatcagcaaaggactggagaggtggacgtgctgcctcattcaacat
cattcccagcagcactggagctgccaaggctgtcggaaaggttctgcctg
ctctcaatggcaagttgaccggaatggccttccgtgtacccactgttgat
gtttcagttgttgacctcactgtcagacttgagaagaaggcaacctatga
ccagatcaaggctgctatcaaggaggagtctgagggaaagttgaagggca
tcttgggttacaccgatgaggatgttgtgtcaaccgacttcattggtgac
aacag
back to top

protein sequence of GAPDH

>DQ091044.1-GAPDH.p1 ID=DQ091044.1-GAPDH.p1|Name=GAPDH|organism=Rosa gymnocarpa|type=polypeptide|length=117bp
LMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPA
LNGKLTGMAFRVPTVDVSVVDLTVRLEKKATYDQIKAAIKEESEGKLKGI
LGYTDEDVVSTDFIGDN
back to top

mRNA from alignment at DQ091044:1..674+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>DQ091044.1-GAPDH.m1 ID=DQ091044.1-GAPDH.m1|Name=GAPDH|organism=Rosa gymnocarpa|type=mRNA|length=674bp|location=Sequence derived from alignment at DQ091044:1..674+ (Rosa gymnocarpa)
gtcttatgactaccgtgcactccatcactggtgagttctcacttgtaacc atgtgagatatatgaatgttaagatactagatttgaaaccaactaaagtc gtctgtgtatttgcaattcagccacccagaagactgttgatggaccatca gcaaaggactggagaggtggacgtgctgcctcattcaacatcattcccag cagcactggagctgccaaggtattttcaatgttctttgtgccactgcttc agtattgttgatacacttttaagttacatgtcagtgatacttcatctgta acagctttattaatccttgattttggaatatctttaggctgtcggaaagg ttctgcctgctctcaatggcaagttgaccggaatggccttccgtgtaccc actgttgatgtttcagttgttgacctcactgtcagacttgagaagaaggc aacctatgaccagatcaaggctgctatcaagtaaggcttgttgaactttg ttgttaattagttgcaatcaaggtggggtgtcatgacattacaatgcatg tcttggttctaatcttttatctttaattctgtctgaacagggaggagtct gagggaaagttgaagggcatcttgggttacaccgatgaggatgttgtgtc aaccgacttcattggtgacaacag
back to top

Coding sequence (CDS) from alignment at DQ091044:1..674+

>DQ091044.1-GAPDH.m1 ID=DQ091044.1-GAPDH.m1|Name=GAPDH|organism=Rosa gymnocarpa|type=CDS|length=355bp|location=Sequence derived from alignment at DQ091044:1..674+ (Rosa gymnocarpa)
gtcttatgactaccgtgcactccatcactgccacccagaagactgttgat
ggaccatcagcaaaggactggagaggtggacgtgctgcctcattcaacat
cattcccagcagcactggagctgccaaggctgtcggaaaggttctgcctg
ctctcaatggcaagttgaccggaatggccttccgtgtacccactgttgat
gtttcagttgttgacctcactgtcagacttgagaagaaggcaacctatga
ccagatcaaggctgctatcaaggaggagtctgagggaaagttgaagggca
tcttgggttacaccgatgaggatgttgtgtcaaccgacttcattggtgac
aacag
back to top