LFY-1, AB162030.1-LFY-1.m1 (mRNA) Pyrus communis

Transcript Overview
NameLFY-1
Unique NameAB162030.1-LFY-1.m1
TypemRNA
OrganismPyrus communis (European Pear)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
LFY-1LFY-1Pyrus communisgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AB162030.1-LFY-1.m1-cds1AB162030.1-LFY-1.m1-cds1Pyrus communisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
LFY-1AB162030.1-LFY-1.p1Pyrus communispolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI42491284
nuccoreAB162030.1
Alignments
Feature NameTypeLocationAnalysis
AB162030 region AB162030:28..1257+ NCBI Rosaceae gene and mRNA sequences
Properties
Property NameValue
ProductLEAFY protein
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>AB162030.1-LFY-1.m1 ID=AB162030.1-LFY-1.m1|Name=LFY-1|organism=Pyrus communis|type=mRNA|length=1230bp
atggatccagatgccttctctgcgaacttgttcaagtgggacttacgtgg
gatggttgtgccgacgaaccgggttcagctcgaagcggccgtaacgccag
cagcggcagctgctgcgggggcggttggttatactttaaggccgccaaga
gagcttggacttggagggcttgaagacttgttccaggcttatggggtcag
atactacccggcggcgaagatagcggagcttggatttactgtgaacaccc
tcttggacatgaaggatgatgagcttgatgacatgatgagcagcctctct
cagatattccgctgggagttgcttgttggggagaggtatggtatcaaagc
tgccgtcagagccgagcgccgccgccttgaggaggaggactctcggcggc
gcaaccctgtctctggtgataccaccaccaatgccctagatgctctctcc
caagaaggactgtcggaggagccagtgcaacaagagaaggagatggtggg
gagcggtgtagggatggcgtgggaggttgtgacggcgggagagaggcgga
agaagcagcggaggatgaagaaggggcaatataggaactgtagtgctgta
gggggtcataataatgatcataacgagggtgtagacgacaaggacgacga
catggacgacatgaatgggcaggggaacggtggaggaggggggttgctag
gcgagagacagagggagcacccgttcatcgtgacggagcctggggaggtg
gcacgtggcaaaaagaacggtcttgattacctcttccatctctacgagca
gtgccgtgatttcttgatccaggtccagaacattgccaaggagcgcggtg
aaaaatgtccaaccaaggtgacaaaccaggtgtttaggtatgccaaaaag
tcaggcgcaagctacatcaacaagccgaagatgcggcactatgtgcactg
ctacgccctgcattgcctggacgtggaggcatcgaatgtgttgaggagag
cgttcaaggagacgggcgaaaatgtcgggtcatggcggcaggcatgttac
aagcctcttgtggtcattgcagcgggccaaggctgggacatcgatgccat
tttcaattctcatccccgtctttccatctggtacgttcccacgaagctcc
gtcagctttgtcacgccgagcgccacaacaccgcctctagctctgcctcc
ggtggcgggggcgagcacctgccctattga
back to top

protein sequence of LFY-1

>AB162030.1-LFY-1.p1 ID=AB162030.1-LFY-1.p1|Name=LFY-1|organism=Pyrus communis|type=polypeptide|length=409bp
MDPDAFSANLFKWDLRGMVVPTNRVQLEAAVTPAAAAAAGAVGYTLRPPR
ELGLGGLEDLFQAYGVRYYPAAKIAELGFTVNTLLDMKDDELDDMMSSLS
QIFRWELLVGERYGIKAAVRAERRRLEEEDSRRRNPVSGDTTTNALDALS
QEGLSEEPVQQEKEMVGSGVGMAWEVVTAGERRKKQRRMKKGQYRNCSAV
GGHNNDHNEGVDDKDDDMDDMNGQGNGGGGGLLGERQREHPFIVTEPGEV
ARGKKNGLDYLFHLYEQCRDFLIQVQNIAKERGEKCPTKVTNQVFRYAKK
SGASYINKPKMRHYVHCYALHCLDVEASNVLRRAFKETGENVGSWRQACY
KPLVVIAAGQGWDIDAIFNSHPRLSIWYVPTKLRQLCHAERHNTASSSAS
GGGGEHLPY
back to top

mRNA from alignment at AB162030:28..1257+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AB162030.1-LFY-1.m1 ID=AB162030.1-LFY-1.m1|Name=LFY-1|organism=Pyrus communis|type=mRNA|length=1230bp|location=Sequence derived from alignment at AB162030:28..1257+ (Pyrus communis)
atggatccagatgccttctctgcgaacttgttcaagtgggacttacgtgg gatggttgtgccgacgaaccgggttcagctcgaagcggccgtaacgccag cagcggcagctgctgcgggggcggttggttatactttaaggccgccaaga gagcttggacttggagggcttgaagacttgttccaggcttatggggtcag atactacccggcggcgaagatagcggagcttggatttactgtgaacaccc tcttggacatgaaggatgatgagcttgatgacatgatgagcagcctctct cagatattccgctgggagttgcttgttggggagaggtatggtatcaaagc tgccgtcagagccgagcgccgccgccttgaggaggaggactctcggcggc gcaaccctgtctctggtgataccaccaccaatgccctagatgctctctcc caagaaggactgtcggaggagccagtgcaacaagagaaggagatggtggg gagcggtgtagggatggcgtgggaggttgtgacggcgggagagaggcgga agaagcagcggaggatgaagaaggggcaatataggaactgtagtgctgta gggggtcataataatgatcataacgagggtgtagacgacaaggacgacga catggacgacatgaatgggcaggggaacggtggaggaggggggttgctag gcgagagacagagggagcacccgttcatcgtgacggagcctggggaggtg gcacgtggcaaaaagaacggtcttgattacctcttccatctctacgagca gtgccgtgatttcttgatccaggtccagaacattgccaaggagcgcggtg aaaaatgtccaaccaaggtgacaaaccaggtgtttaggtatgccaaaaag tcaggcgcaagctacatcaacaagccgaagatgcggcactatgtgcactg ctacgccctgcattgcctggacgtggaggcatcgaatgtgttgaggagag cgttcaaggagacgggcgaaaatgtcgggtcatggcggcaggcatgttac aagcctcttgtggtcattgcagcgggccaaggctgggacatcgatgccat tttcaattctcatccccgtctttccatctggtacgttcccacgaagctcc gtcagctttgtcacgccgagcgccacaacaccgcctctagctctgcctcc ggtggcgggggcgagcacctgccctattga
back to top

Coding sequence (CDS) from alignment at AB162030:28..1257+

>AB162030.1-LFY-1.m1 ID=AB162030.1-LFY-1.m1|Name=LFY-1|organism=Pyrus communis|type=CDS|length=1230bp|location=Sequence derived from alignment at AB162030:28..1257+ (Pyrus communis)
atggatccagatgccttctctgcgaacttgttcaagtgggacttacgtgg
gatggttgtgccgacgaaccgggttcagctcgaagcggccgtaacgccag
cagcggcagctgctgcgggggcggttggttatactttaaggccgccaaga
gagcttggacttggagggcttgaagacttgttccaggcttatggggtcag
atactacccggcggcgaagatagcggagcttggatttactgtgaacaccc
tcttggacatgaaggatgatgagcttgatgacatgatgagcagcctctct
cagatattccgctgggagttgcttgttggggagaggtatggtatcaaagc
tgccgtcagagccgagcgccgccgccttgaggaggaggactctcggcggc
gcaaccctgtctctggtgataccaccaccaatgccctagatgctctctcc
caagaaggactgtcggaggagccagtgcaacaagagaaggagatggtggg
gagcggtgtagggatggcgtgggaggttgtgacggcgggagagaggcgga
agaagcagcggaggatgaagaaggggcaatataggaactgtagtgctgta
gggggtcataataatgatcataacgagggtgtagacgacaaggacgacga
catggacgacatgaatgggcaggggaacggtggaggaggggggttgctag
gcgagagacagagggagcacccgttcatcgtgacggagcctggggaggtg
gcacgtggcaaaaagaacggtcttgattacctcttccatctctacgagca
gtgccgtgatttcttgatccaggtccagaacattgccaaggagcgcggtg
aaaaatgtccaaccaaggtgacaaaccaggtgtttaggtatgccaaaaag
tcaggcgcaagctacatcaacaagccgaagatgcggcactatgtgcactg
ctacgccctgcattgcctggacgtggaggcatcgaatgtgttgaggagag
cgttcaaggagacgggcgaaaatgtcgggtcatggcggcaggcatgttac
aagcctcttgtggtcattgcagcgggccaaggctgggacatcgatgccat
tttcaattctcatccccgtctttccatctggtacgttcccacgaagctcc
gtcagctttgtcacgccgagcgccacaacaccgcctctagctctgcctcc
ggtggcgggggcgagcacctgccctattga
back to top