CBF, HM992943.1-CBF.m1 (mRNA) Prunus persica

Transcript Overview
NameCBF
Unique NameHM992943.1-CBF.m1
TypemRNA
OrganismPrunus persica (Peach)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
CBFCBFPrunus persicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HM992943.1-CBF.m1-cds1HM992943.1-CBF.m1-cds1Prunus persicaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBFHM992943.1-CBF.p1Prunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI315284476
nuccoreHM992943.1
Alignments
Feature NameTypeLocationAnalysis
HM992943 region HM992943:1..720+ NCBI Rosaceae gene and mRNA sequences
scaffold_5 supercontig scaffold_5:10051648..10052367- Prunus persica Whole Genome v1.0 Assembly & Annotation
Properties
Property NameValue
ProductC-repeat binding factor
Sourcegenbank
Genbank notePpCBF1
Sequences
The following sequences are available for this feature:

mRNA sequence

>HM992943.1-CBF.m1 ID=HM992943.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=720bp
atggtcatggacatgatcttcgctcaggttgctgactcggccgaccagcc
caggtcgagttcgtcatccgacgcaagcgtgagcaccttacgcacttcgg
acgtcatactggcgtcgagcagtccgaagaagcgcgcgggaaggaaggtt
ttcaaagagacgaggcacccggtttataggggtgtgaggaggagagacaa
caacaagtgggtgtgtgagttgagacagcccaacaagaagaagtccggga
tttggctcgggacctatcctacggctgagatggctgctcgtgcccatgac
gtggcggcattggcttttaaagggaagcttgcctgcctcaactttgctga
ctcgggttggcggctgccggtcgcggcatccttggattccatggatatcc
agagggcagctgcggaggccgctgaagggttcagaccggtggagttcggt
ggggtttccagcggcagcagtgatgagaaggagagaatggttgtggtgga
agagaagaagaagaagcaggctattgtggatatgggaaaaagctgcagca
gattaaacttgttttatttggatgaggaggaaatgtttgatatgccaagg
ttgattgacaacatggctgaagggcttcttctttctccaccccaatgctt
agctggctatttgaattgggatgacatggaaactgaagctgattccaagt
tgtggagtttctctatctga
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protein sequence of CBF

>HM992943.1-CBF.p1 ID=HM992943.1-CBF.p1|Name=CBF|organism=Prunus persica|type=polypeptide|length=239bp
MVMDMIFAQVADSADQPRSSSSSDASVSTLRTSDVILASSSPKKRAGRKV
FKETRHPVYRGVRRRDNNKWVCELRQPNKKKSGIWLGTYPTAEMAARAHD
VAALAFKGKLACLNFADSGWRLPVAASLDSMDIQRAAAEAAEGFRPVEFG
GVSSGSSDEKERMVVVEEKKKKQAIVDMGKSCSRLNLFYLDEEEMFDMPR
LIDNMAEGLLLSPPQCLAGYLNWDDMETEADSKLWSFSI
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mRNA from alignment at HM992943:1..720+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HM992943.1-CBF.m1 ID=HM992943.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=720bp|location=Sequence derived from alignment at HM992943:1..720+ (Prunus persica)
atggtcatggacatgatcttcgctcaggttgctgactcggccgaccagcc caggtcgagttcgtcatccgacgcaagcgtgagcaccttacgcacttcgg acgtcatactggcgtcgagcagtccgaagaagcgcgcgggaaggaaggtt ttcaaagagacgaggcacccggtttataggggtgtgaggaggagagacaa caacaagtgggtgtgtgagttgagacagcccaacaagaagaagtccggga tttggctcgggacctatcctacggctgagatggctgctcgtgcccatgac gtggcggcattggcttttaaagggaagcttgcctgcctcaactttgctga ctcgggttggcggctgccggtcgcggcatccttggattccatggatatcc agagggcagctgcggaggccgctgaagggttcagaccggtggagttcggt ggggtttccagcggcagcagtgatgagaaggagagaatggttgtggtgga agagaagaagaagaagcaggctattgtggatatgggaaaaagctgcagca gattaaacttgttttatttggatgaggaggaaatgtttgatatgccaagg ttgattgacaacatggctgaagggcttcttctttctccaccccaatgctt agctggctatttgaattgggatgacatggaaactgaagctgattccaagt tgtggagtttctctatctga
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Coding sequence (CDS) from alignment at HM992943:1..720+

>HM992943.1-CBF.m1 ID=HM992943.1-CBF.m1|Name=CBF|organism=Prunus persica|type=CDS|length=720bp|location=Sequence derived from alignment at HM992943:1..720+ (Prunus persica)
atggtcatggacatgatcttcgctcaggttgctgactcggccgaccagcc
caggtcgagttcgtcatccgacgcaagcgtgagcaccttacgcacttcgg
acgtcatactggcgtcgagcagtccgaagaagcgcgcgggaaggaaggtt
ttcaaagagacgaggcacccggtttataggggtgtgaggaggagagacaa
caacaagtgggtgtgtgagttgagacagcccaacaagaagaagtccggga
tttggctcgggacctatcctacggctgagatggctgctcgtgcccatgac
gtggcggcattggcttttaaagggaagcttgcctgcctcaactttgctga
ctcgggttggcggctgccggtcgcggcatccttggattccatggatatcc
agagggcagctgcggaggccgctgaagggttcagaccggtggagttcggt
ggggtttccagcggcagcagtgatgagaaggagagaatggttgtggtgga
agagaagaagaagaagcaggctattgtggatatgggaaaaagctgcagca
gattaaacttgttttatttggatgaggaggaaatgtttgatatgccaagg
ttgattgacaacatggctgaagggcttcttctttctccaccccaatgctt
agctggctatttgaattgggatgacatggaaactgaagctgattccaagt
tgtggagtttctctatctga
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