IPT7A, HQ585953.1-IPT7A.m1 (mRNA) Malus x domestica

Transcript Overview
NameIPT7A
Unique NameHQ585953.1-IPT7A.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
IPT7AIPT7AMalus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ585953.1-IPT7A.m1-cds1HQ585953.1-IPT7A.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
IPT7AHQ585953.1-IPT7A.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI325112804
nuccoreHQ585953.1
Alignments
Feature NameTypeLocationAnalysis
HQ585953 region HQ585953:1..855+ NCBI Rosaceae gene and mRNA sequences
Chr00 chromosome Chr00:16949199..16950053- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr6 chromosome chr6:5106680..5107534- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr6 chromosome chr6:7224282..7225136- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr6 chromosome chr6:5896278..5897132- Malus x domestica Whole Genome v1.0p Assembly & Annotation
chr6 chromosome chr6:8409211..8410065- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productadenylate isopentenyltransferase
Sourcegenbank
Genbank notecytokinin biosynthesis enzyme
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ585953.1-IPT7A.m1 ID=HQ585953.1-IPT7A.m1|Name=IPT7A|organism=Malus x domestica|type=mRNA|length=855bp
atggaacctgtgcatgtcaatggttctgtccacaaaaaggcgaaggttgt
ttttataatgggtccgactgggtgtggaaaaaccaaactttccatagacc
tagctaccaattacgggggagaagtaattaattcggacaaaatccaagtc
tacaaaggcctggacattgtcactaacaaagccacagaatctgagcaacg
aggcatccgtcatcacttgctagggttcgtagaagaccccgtagctgatt
tctccgttgatgaatttcgtcgtcgtgtgcaaacttcaatcgatgagatc
acaaagcgtaactgcctcccaatcattgctggcggatccaactcttatat
cgaggcactcatcgaagatccagtgattgattttcgaaataaatatgatt
gctgttttatatggcttgatgtgtcgttgcctgtgctatataaccatgtg
tccaaaagagttgacgaaatggtggctgcaggattagtggatgagcttcg
tgaaatgtttgctccaggggtgaattatgatggtggcattcgccgagcaa
tcggagctccggagatgcatccgtacttcatggctgaaatgaacaacaat
atagtagacgatgacaaggttcgtaaggaatttctgctgaaagatggcat
ttggaaaaccaaagaaaatacttgtaaacttgctgaacgccaagtgcaga
aaattaaacttctcagcgacaaatgggatattcatcgtattgatgtcact
gctgtgtatgagaactgtggaaaggaagctgtggttgcctgggaaacctt
ggttttaaagccaagtttcaccattgtgggtggatttttgaagaaacatg
gttga
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protein sequence of IPT7A

>HQ585953.1-IPT7A.p1 ID=HQ585953.1-IPT7A.p1|Name=IPT7A|organism=Malus x domestica|type=polypeptide|length=284bp
MEPVHVNGSVHKKAKVVFIMGPTGCGKTKLSIDLATNYGGEVINSDKIQV
YKGLDIVTNKATESEQRGIRHHLLGFVEDPVADFSVDEFRRRVQTSIDEI
TKRNCLPIIAGGSNSYIEALIEDPVIDFRNKYDCCFIWLDVSLPVLYNHV
SKRVDEMVAAGLVDELREMFAPGVNYDGGIRRAIGAPEMHPYFMAEMNNN
IVDDDKVRKEFLLKDGIWKTKENTCKLAERQVQKIKLLSDKWDIHRIDVT
AVYENCGKEAVVAWETLVLKPSFTIVGGFLKKHG
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mRNA from alignment at HQ585953:1..855+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ585953.1-IPT7A.m1 ID=HQ585953.1-IPT7A.m1|Name=IPT7A|organism=Malus x domestica|type=mRNA|length=855bp|location=Sequence derived from alignment at HQ585953:1..855+ (Malus x domestica)
atggaacctgtgcatgtcaatggttctgtccacaaaaaggcgaaggttgt ttttataatgggtccgactgggtgtggaaaaaccaaactttccatagacc tagctaccaattacgggggagaagtaattaattcggacaaaatccaagtc tacaaaggcctggacattgtcactaacaaagccacagaatctgagcaacg aggcatccgtcatcacttgctagggttcgtagaagaccccgtagctgatt tctccgttgatgaatttcgtcgtcgtgtgcaaacttcaatcgatgagatc acaaagcgtaactgcctcccaatcattgctggcggatccaactcttatat cgaggcactcatcgaagatccagtgattgattttcgaaataaatatgatt gctgttttatatggcttgatgtgtcgttgcctgtgctatataaccatgtg tccaaaagagttgacgaaatggtggctgcaggattagtggatgagcttcg tgaaatgtttgctccaggggtgaattatgatggtggcattcgccgagcaa tcggagctccggagatgcatccgtacttcatggctgaaatgaacaacaat atagtagacgatgacaaggttcgtaaggaatttctgctgaaagatggcat ttggaaaaccaaagaaaatacttgtaaacttgctgaacgccaagtgcaga aaattaaacttctcagcgacaaatgggatattcatcgtattgatgtcact gctgtgtatgagaactgtggaaaggaagctgtggttgcctgggaaacctt ggttttaaagccaagtttcaccattgtgggtggatttttgaagaaacatg gttga
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Coding sequence (CDS) from alignment at HQ585953:1..855+

>HQ585953.1-IPT7A.m1 ID=HQ585953.1-IPT7A.m1|Name=IPT7A|organism=Malus x domestica|type=CDS|length=855bp|location=Sequence derived from alignment at HQ585953:1..855+ (Malus x domestica)
atggaacctgtgcatgtcaatggttctgtccacaaaaaggcgaaggttgt
ttttataatgggtccgactgggtgtggaaaaaccaaactttccatagacc
tagctaccaattacgggggagaagtaattaattcggacaaaatccaagtc
tacaaaggcctggacattgtcactaacaaagccacagaatctgagcaacg
aggcatccgtcatcacttgctagggttcgtagaagaccccgtagctgatt
tctccgttgatgaatttcgtcgtcgtgtgcaaacttcaatcgatgagatc
acaaagcgtaactgcctcccaatcattgctggcggatccaactcttatat
cgaggcactcatcgaagatccagtgattgattttcgaaataaatatgatt
gctgttttatatggcttgatgtgtcgttgcctgtgctatataaccatgtg
tccaaaagagttgacgaaatggtggctgcaggattagtggatgagcttcg
tgaaatgtttgctccaggggtgaattatgatggtggcattcgccgagcaa
tcggagctccggagatgcatccgtacttcatggctgaaatgaacaacaat
atagtagacgatgacaaggttcgtaaggaatttctgctgaaagatggcat
ttggaaaaccaaagaaaatacttgtaaacttgctgaacgccaagtgcaga
aaattaaacttctcagcgacaaatgggatattcatcgtattgatgtcact
gctgtgtatgagaactgtggaaaggaagctgtggttgcctgggaaacctt
ggttttaaagccaagtttcaccattgtgggtggatttttgaagaaacatg
gttga
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