IPT1B, HQ585952.1-IPT1B.m1 (mRNA) Malus x domestica

Transcript Overview
NameIPT1B
Unique NameHQ585952.1-IPT1B.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
IPT1BIPT1BMalus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HQ585952.1-IPT1B.m1-cds1HQ585952.1-IPT1B.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
IPT1BHQ585952.1-IPT1B.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI325112802
nuccoreHQ585952.1
Alignments
Feature NameTypeLocationAnalysis
HQ585952 region HQ585952:1..1113+ NCBI Rosaceae gene and mRNA sequences
Chr16 chromosome Chr16:2935618..2936730- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr16 chromosome chr16:1116899..1118011- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr16 chromosome chr16:1116900..1118012- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productadenylate isopentenyltransferase
Sourcegenbank
Genbank notecytokinin biosynthesis enzyme
Sequences
The following sequences are available for this feature:

mRNA sequence

>HQ585952.1-IPT1B.m1 ID=HQ585952.1-IPT1B.m1|Name=IPT1B|organism=Malus x domestica|type=mRNA|length=1113bp
atgacacttcatcccttcccaactcactccctccattattccaatttcaa
tttcaatacgaattatatctcccaccgtttccacttgctcccgcagctcc
accacctctacaaccaccccactcatccgcttcacctcccccaaaggccc
cgccgctgggcccacatggccaccggccacacttccgcggtcccacgtcg
aaaagacaagctcctcgtcatcatgggggccactggcgccggcaagtccc
gcctctccctcgacctcgccacccgcttccccttcttcgaaatcatcaac
tccgacaaaatacaactctaccgcggcctcgacatcaccaccaacaagct
ccccctcccggaacgactcggcgttccccaccacctcctcggcgagttgg
acccccgagacggagatttcacgcccgccgattttcgcgccgtcgccggt
caggttgtttccggcattacgaatcggaggaaggtgccgatgctcgtcgg
cgggtcaaactccttcattcacgcgatggtcgcggaccgtttcgaaccgg
ggtgcaatgtcttcgaaccgggttcagacgcctccctctcggccgagctc
agatacaattgctgttttctgtgggtggacgtgtcgatggcggtgttgac
agagtatctatcgaagcgagtcgacgaaatgctcgactcgggaatgttcg
aggagttggccgagttttgcgacccggatcgccaggacaagcacgacccg
gcagcggttccgaccgggctgagaaaggcgattggagtgcccgagttcac
tcggtattttaaaaaatacccacaaagtaaaagggacgaggacgatgatc
gggagcggagaggagcatacgaagaggcggtaagggcgatcaaggacaac
acgtgtcagctggcgaagaggcagatagggaaggtcctacgtttgagagg
gggagggtgggacctacggagactagacgcaacggacgcgtttagggcgg
tggttgcgacgacatcgtcggatagtgacggcggagagaggtggtcagat
atatgggagagacaggtggtgggaccaagcgtgaagattgtgaagcgctt
cttggaggagtag
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protein sequence of IPT1B

>HQ585952.1-IPT1B.p1 ID=HQ585952.1-IPT1B.p1|Name=IPT1B|organism=Malus x domestica|type=polypeptide|length=370bp
MTLHPFPTHSLHYSNFNFNTNYISHRFHLLPQLHHLYNHPTHPLHLPQRP
RRWAHMATGHTSAVPRRKDKLLVIMGATGAGKSRLSLDLATRFPFFEIIN
SDKIQLYRGLDITTNKLPLPERLGVPHHLLGELDPRDGDFTPADFRAVAG
QVVSGITNRRKVPMLVGGSNSFIHAMVADRFEPGCNVFEPGSDASLSAEL
RYNCCFLWVDVSMAVLTEYLSKRVDEMLDSGMFEELAEFCDPDRQDKHDP
AAVPTGLRKAIGVPEFTRYFKKYPQSKRDEDDDRERRGAYEEAVRAIKDN
TCQLAKRQIGKVLRLRGGGWDLRRLDATDAFRAVVATTSSDSDGGERWSD
IWERQVVGPSVKIVKRFLEE
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mRNA from alignment at HQ585952:1..1113+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HQ585952.1-IPT1B.m1 ID=HQ585952.1-IPT1B.m1|Name=IPT1B|organism=Malus x domestica|type=mRNA|length=1113bp|location=Sequence derived from alignment at HQ585952:1..1113+ (Malus x domestica)
atgacacttcatcccttcccaactcactccctccattattccaatttcaa tttcaatacgaattatatctcccaccgtttccacttgctcccgcagctcc accacctctacaaccaccccactcatccgcttcacctcccccaaaggccc cgccgctgggcccacatggccaccggccacacttccgcggtcccacgtcg aaaagacaagctcctcgtcatcatgggggccactggcgccggcaagtccc gcctctccctcgacctcgccacccgcttccccttcttcgaaatcatcaac tccgacaaaatacaactctaccgcggcctcgacatcaccaccaacaagct ccccctcccggaacgactcggcgttccccaccacctcctcggcgagttgg acccccgagacggagatttcacgcccgccgattttcgcgccgtcgccggt caggttgtttccggcattacgaatcggaggaaggtgccgatgctcgtcgg cgggtcaaactccttcattcacgcgatggtcgcggaccgtttcgaaccgg ggtgcaatgtcttcgaaccgggttcagacgcctccctctcggccgagctc agatacaattgctgttttctgtgggtggacgtgtcgatggcggtgttgac agagtatctatcgaagcgagtcgacgaaatgctcgactcgggaatgttcg aggagttggccgagttttgcgacccggatcgccaggacaagcacgacccg gcagcggttccgaccgggctgagaaaggcgattggagtgcccgagttcac tcggtattttaaaaaatacccacaaagtaaaagggacgaggacgatgatc gggagcggagaggagcatacgaagaggcggtaagggcgatcaaggacaac acgtgtcagctggcgaagaggcagatagggaaggtcctacgtttgagagg gggagggtgggacctacggagactagacgcaacggacgcgtttagggcgg tggttgcgacgacatcgtcggatagtgacggcggagagaggtggtcagat atatgggagagacaggtggtgggaccaagcgtgaagattgtgaagcgctt cttggaggagtag
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Coding sequence (CDS) from alignment at HQ585952:1..1113+

>HQ585952.1-IPT1B.m1 ID=HQ585952.1-IPT1B.m1|Name=IPT1B|organism=Malus x domestica|type=CDS|length=1113bp|location=Sequence derived from alignment at HQ585952:1..1113+ (Malus x domestica)
atgacacttcatcccttcccaactcactccctccattattccaatttcaa
tttcaatacgaattatatctcccaccgtttccacttgctcccgcagctcc
accacctctacaaccaccccactcatccgcttcacctcccccaaaggccc
cgccgctgggcccacatggccaccggccacacttccgcggtcccacgtcg
aaaagacaagctcctcgtcatcatgggggccactggcgccggcaagtccc
gcctctccctcgacctcgccacccgcttccccttcttcgaaatcatcaac
tccgacaaaatacaactctaccgcggcctcgacatcaccaccaacaagct
ccccctcccggaacgactcggcgttccccaccacctcctcggcgagttgg
acccccgagacggagatttcacgcccgccgattttcgcgccgtcgccggt
caggttgtttccggcattacgaatcggaggaaggtgccgatgctcgtcgg
cgggtcaaactccttcattcacgcgatggtcgcggaccgtttcgaaccgg
ggtgcaatgtcttcgaaccgggttcagacgcctccctctcggccgagctc
agatacaattgctgttttctgtgggtggacgtgtcgatggcggtgttgac
agagtatctatcgaagcgagtcgacgaaatgctcgactcgggaatgttcg
aggagttggccgagttttgcgacccggatcgccaggacaagcacgacccg
gcagcggttccgaccgggctgagaaaggcgattggagtgcccgagttcac
tcggtattttaaaaaatacccacaaagtaaaagggacgaggacgatgatc
gggagcggagaggagcatacgaagaggcggtaagggcgatcaaggacaac
acgtgtcagctggcgaagaggcagatagggaaggtcctacgtttgagagg
gggagggtgggacctacggagactagacgcaacggacgcgtttagggcgg
tggttgcgacgacatcgtcggatagtgacggcggagagaggtggtcagat
atatgggagagacaggtggtgggaccaagcgtgaagattgtgaagcgctt
cttggaggagtag
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