F3H, FJ919633.1-F3H.m1 (mRNA) Malus x domestica

Transcript Overview
NameF3H
Unique NameFJ919633.1-F3H.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
F3HF3HMalus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
FJ919633.1-F3H.m1-cds1FJ919633.1-F3H.m1-cds1Malus x domesticaCDS
FJ919633.1-F3H.m1-cds2FJ919633.1-F3H.m1-cds2Malus x domesticaCDS
FJ919633.1-F3H.m1-cds3FJ919633.1-F3H.m1-cds3Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
F3HFJ919633.1-F3H.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI237687732
nuccoreFJ919633.1
Alignments
Feature NameTypeLocationAnalysis
FJ919633 region FJ919633:1069..4745+ NCBI Rosaceae gene and mRNA sequences
Chr06 chromosome Chr06:33501285..33504351+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr6 chromosome chr6:21701903..21704969+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr6 chromosome chr6:26649387..26652453+ Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productflavonoid 3' hydroxylase IIb
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>FJ919633.1-F3H.m1 ID=FJ919633.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=1536bp
atgtttgttctcatattcttcaccgttgtcttggccttcttcttataccg
gctcttcgcccccggcgggagccgccacgctctgcctcttccgccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcattctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctccagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgagctt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
tgggccgggaccggctcgtaaccgagtcggacctgcccaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgatcgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga
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protein sequence of F3H

>FJ919633.1-F3H.p1 ID=FJ919633.1-F3H.p1|Name=F3H|organism=Malus x domestica|type=polypeptide|length=511bp
MFVLIFFTVVLAFFLYRLFAPGGSRHALPLPPGPKPWPVVGNLPHLGPVP
HHSLAALARQYGPLMHLRLGFVDVVVAASASVASQFLKTHDANFSSRPPN
SGAKHLAYNYQDLVFAPYGPRWRMLRKISSVHLFSGKALDDLKHVRQEEV
GVLAHGLASAGSKPVSLGQLLNVCTVNALGRVMVGRRLFGDGGGREDQKA
DEFKSMVVEMMVLAGVFNIGDFIPALEWLDLQGVAGKMKKLHKRFDAFLT
AIVEDHKRSGEGKHVDMLTTLLSLTDDADGEGAKLTDTEIKALLLNMFTA
GTDTSSSTVEWAIAELLRHPKILAQLQQELDQVVGRDRLVTESDLPNLTY
LQAVIKETFRLHPSTPLSLPRMASESCEINGFHIPKGATLLVNVWAISRD
PAQWSEPLEFRPERFLPGGEKPNVDVKGNDFEVIPFGAGRRICAGMTLGL
RMVSLMIATLVHGFDWTLADGLTPEKLNMDEAYGLTLQRAAPLMVHPRNR
LAPHAYNASSP
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mRNA from alignment at FJ919633:1069..4745+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>FJ919633.1-F3H.m1 ID=FJ919633.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=3677bp|location=Sequence derived from alignment at FJ919633:1069..4745+ (Malus x domestica)
atgtttgttctcatattcttcaccgttgtcttggccttcttcttataccg gctcttcgcccccggcgggagccgccacgctctgcctcttccgccagggc cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc catcattctctggcggcgttggcccgtcagtatggaccccttatgcacct ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt cacagttcttgaagacccacgacgccaatttctccagcagaccacccaac tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt tctccggcaaggctctcgatgatcttaaacatgttcgccaggtaagcaat tcggccgtcgtctttttacgttgattttctctacacttcattaatgcatg ttttattaattatctagcaatcgaaaactgatttattcttaaattgaatc actaggttgactacacgtttcttaaagcttttattaaaaaatttaatcca tcatcataatcgttaatcaacaattaattgtggtcataattatgaagttg ttactccatgtaagaaaattggtgcattttatgctcactactatatttat catcgtttgatgagtttaaattttaatattggtattgatccactgtacag atctcaaatgacgacgataaataaggtggtgaaacatcatcatcgcttga ggatgatgcacaaaaatattgccataagaaaatagtgtatgaaagtgtga ttaatggtagactactacaggtgatgaattatcgagatataatttttctt ttcaaatcactgagttttgaaatcaaagccctagtaatattgtctctaga ccctgcttactaatttagtttggagtagtgatatatataatctctaaacc ctagtaatattgtctgcaataagataaaatagactcgtaaatcttaggat taactatattttacatcacaaggtttggagatcgtttgcacaatacaaca acaacaacaacaaagcattttcccactaagtggggtcggctatatgaatc ttagaacgccattgcgctcggttttgtgtcatgtcctccgttagatccaa gtactctaagtcttttcttagggtctcttccaaagttttcctaggtcttc ctctaccccttcggccccgaacctctgtcccgtagtcacatcttcgaacc ggagcgttagtaggccttctttgctcatgtccaaaccaccgtaaccgatt ttctctcatctttccttcaacttcggctactcctactttacctcggatat cctcattcccaatcttatcatttcttatgtgcccacacatcccacgaagc atccttatctccgctacacccattttgtgtacgtgttgatgcttcaccgc ccaacattctatgccatacaacatcgctggccttattgccgtcctataaa attttcccttgagcttcagtgacctatgacggtcacacaacacgccggat gcactcttacacttcatccatccatcttgtattctatggttgagatctcc atctaattctccgttctcgtgcaagatagatcctaggtagcgaaaacggt cgctttttgtgatatttacatattacaccacgtcatttcttaattacact aatttaaattttccttcaatttgatgtttgagatactataattgcataag tcttaatgaaacatttttgatactgtttacttttaatgttaaagatattt ttactctaaaaagttattcctagtactattcacttacaatatttttttgt tttcaaagtttttaagttttttttttttttaataatattataggaggaag taggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgagc ttagggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgat ggtagggcggaggctcttcggagacggcggcgggcgcgaagaccagaagg ccgacgagttcaaatccatggtggtggagatgatggtgttggctggcgtt ttcaacatcggcgacttcatcccggccctcgagtggctggacttgcaggg ggtggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttga ccgccattgttgaagaccacaagaggagcggcgaagggaagcacgtggac atgctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgc caagctcacggacactgagattaaagctttgcttttggtacgtaggccct ctctctctctctctctctctctctctctctctcccttcattttgtttgaa ccgttgcatatgataacaaaaggatttatagtatagtttgactttgagga ttttagaaaaataagtattgtttgttttaataagtgaagtattttttttt ttcaaattattttcacttttcgtacactttttttattatctttgtgctta acatttctttatcaacttgttcggtttagttattaaaagaaaagatgaac gctcaagaagtgaaaatttgtcgttcttaattattattttgaatttttat ctctcttttagacacttttttttcatttaatgttgttcatatgaagtgta aaactattttatagtgtgtcaaaaatacttctgttaataaaaataaatca gaaatattattaggacataaatacaactttccacaatttccccaaaatat aaatttatttatactaatttccccaatgttataagtttttactaattccc tctgtagatatgttttggtttttcagctacctttcttgttggccagtggt gtccacgtcatctttagtcacattactacaaaaagctattagactgaccc acccataataattttgatgcacacagaacatgttcacagctggcactgac acgtcatcaagcacggtggaatgggccatagcagaactccttcgccaccc caagattctagcccaactccaacaagagctggaccaagtagtgggccggg accggctcgtaaccgagtcggacctgcccaacttgacctacctccaagca gtaatcaaggaaacctttcggctacacccgtcaaccccgctctccctgcc tcgaatggcgtccgagagttgcgaaatcaacgggttccacatccccaagg gtgccactcttctggtcaacgtatgggccatatctcgcgacccggcccaa tggtccgaaccgcttgagtttagacccgagcggttcttgccgggtggaga gaagcccaatgtggacgtcaagggtaatgatttcgaggttataccgtttg gggccgggcggagaatatgcgccgggatgacccttgggctgcgtatggtg tctctaatgatcgcgaccctggtccatggttttgattggaccttggctga tgggctcacacctgagaaattgaacatggacgaggcttatgggctcacac tacaaagagccgcaccattaatggtgcacccacgtaacaggctagcccct catgcatataatgcgtcatcaccttga
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Coding sequence (CDS) from alignment at FJ919633:1069..4745+

>FJ919633.1-F3H.m1 ID=FJ919633.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=CDS|length=1536bp|location=Sequence derived from alignment at FJ919633:1069..4745+ (Malus x domestica)
atgtttgttctcatattcttcaccgttgtcttggccttcttcttataccg
gctcttcgcccccggcgggagccgccacgctctgcctcttccgccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcattctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctccagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgagctt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
tgggccgggaccggctcgtaaccgagtcggacctgcccaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgatcgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga
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