F3H, FJ919632.1-F3H.m1 (mRNA) Malus x domestica

Transcript Overview
NameF3H
Unique NameFJ919632.1-F3H.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
F3HF3HMalus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
FJ919632.1-F3H.m1-cds1FJ919632.1-F3H.m1-cds1Malus x domesticaCDS
FJ919632.1-F3H.m1-cds2FJ919632.1-F3H.m1-cds2Malus x domesticaCDS
FJ919632.1-F3H.m1-cds3FJ919632.1-F3H.m1-cds3Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
F3HFJ919632.1-F3H.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI237687730
nuccoreFJ919632.1
Alignments
Feature NameTypeLocationAnalysis
FJ919632 region FJ919632:1069..4135+ NCBI Rosaceae gene and mRNA sequences
Chr06 chromosome Chr06:33501285..33504351+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr6 chromosome chr6:21701903..21704969+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr6 chromosome chr6:26649387..26652453+ Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productflavonoid 3' hydroxylase IIa
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>FJ919632.1-F3H.m1 ID=FJ919632.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=1536bp
atgtttgttctcatattcttcaccgttgtcttggccttcttcttatacag
gctcttcgcccccggcgggagccgccacgctcagccccttccaccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcactctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctctagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgaactt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
cggggcgggatcggctcataaccgagtcggacctgcctaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgaccgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga
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protein sequence of F3H

>FJ919632.1-F3H.p1 ID=FJ919632.1-F3H.p1|Name=F3H|organism=Malus x domestica|type=polypeptide|length=511bp
MFVLIFFTVVLAFFLYRLFAPGGSRHAQPLPPGPKPWPVVGNLPHLGPVP
HHSLAALARQYGPLMHLRLGFVDVVVAASASVASQFLKTHDANFSSRPPN
SGAKHLAYNYQDLVFAPYGPRWRMLRKISSVHLFSGKALDDLKHVRQEEV
GVLAHGLASAGSKPVNLGQLLNVCTVNALGRVMVGRRLFGDGGGREDQKA
DEFKSMVVEMMVLAGVFNIGDFIPALEWLDLQGVAGKMKKLHKRFDAFLT
AIVEDHKRSGEGKHVDMLTTLLSLTDDADGEGAKLTDTEIKALLLNMFTA
GTDTSSSTVEWAIAELLRHPKILAQLQQELDQVAGRDRLITESDLPNLTY
LQAVIKETFRLHPSTPLSLPRMASESCEINGFHIPKGATLLVNVWAISRD
PAQWSEPLEFRPERFLPGGEKPNVDVKGNDFEVIPFGAGRRICAGMTLGL
RMVSLMTATLVHGFDWTLADGLTPEKLNMDEAYGLTLQRAAPLMVHPRNR
LAPHAYNASSP
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mRNA from alignment at FJ919632:1069..4135+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>FJ919632.1-F3H.m1 ID=FJ919632.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=3067bp|location=Sequence derived from alignment at FJ919632:1069..4135+ (Malus x domestica)
atgtttgttctcatattcttcaccgttgtcttggccttcttcttatacag gctcttcgcccccggcgggagccgccacgctcagccccttccaccagggc cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc catcactctctggcggcgttggcccgtcagtatggaccccttatgcacct ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt cacagttcttgaagacccacgacgccaatttctctagcagaccacccaac tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt tctccggcaaggctctcgatgatcttaaacatgttcgccaggtaagcaat tcggccgtcgtctttttacgatgattttctctacacttcattaatgcatg ttttattaattatctagcaatcgaaaactgatttattcttaaattaaatc actaggttgactacacgtttcttaaagcttttattaaaaaaaataatcca tcatcataattgttaattaacaattaattgtggtcttaattatgtagttg ttactccatgtaagaaaattagtgcattttatgctcactactatatttat catcatttgatgagtttaaattttaagatttgtatcgatccacataacaa atgacggcgataaataaggtggtgaagcatcatcatcgcttgagtacaat gaacaaaaatattgccataagaaaatagtgtatgaaagtgcgattaatgg tagactagtccaggtgatgaattaccgagatataatttttcttttcaaat cgctgagttttgaaatcaaagccctagtaatattgtgtctagaccctgct tactaatttagtttggagtagtgatataatagtaatattgtttgcaataa gataaaatagactcgtaaattttaggattaactatattttacatcacaag gtttggagatcgtttgcacaataagccacaaaattttgatttttatacat attacaccacgtcatttcttaattacactaatttaattttccttcaattt gatgttcgagatactataattgcataagtcttaacgaaacacttttggta ctctttacttaacgttaaagacatttttattctaaaaagccactcctagt actattcacttacaacatttttttgttctcaaagtttttaagtttttttc attagttttttttttaattttttttaataatattataggaggaagtaggt gtgctggcacatggattagcaagtgcagggtcaaagccagtgaacttagg gcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatggtag ggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggccgac gagttcaaatccatggtggtggagatgatggtgttggctggcgttttcaa catcggcgacttcatcccggccctcgagtggctggacttgcagggggtgg cgggaaagatgaagaagctgcacaagaggttcgatgccttcttgaccgcc attgttgaagaccacaagaggagcggcgaagggaagcacgtggacatgct gacgacgttgctgtcgctcacggatgatgctgacggtgagggcgccaagc tcacggacactgagattaaagctttgcttttggtacgtaggccctcttct ctctctctctctctctctctcccttcatcattttgtttgaaccgttgcat atgataacaaaaggatttatagtatagtttgactttgaggattttagaaa aataagtattgtttgttttaataagtgaagtattttttttttcaaattat tttcacttttcgtacactttttttattatctttgtgcttaacatttcttt atcaacttgttcggtttagttattaaaagaaaagatgaacgctcaagaag tgaaaatttgtcgttcataattattattttgaatttttatctctctttta gacacttttttttcatttaatgttgttcatatgaagtgtaaaactatttt atagtgtgtcaaaaatacttctgttaataaaaataaatcagaaatattat taggacataaatacaactttccacaatttccccaaaatataaatttattt atactaatttccccaatgttataagtttttactaattccctctgtagata tgttttggtttttcagcaacctttcttgttggccagtggtgtccacgtca tctttagtcacattactacaaaaagctattacactgacccacccataata attttgatgcacacagaacatgttcacagctggcactgacacgtcatcaa gcacggtggaatgggccatagcagaactccttcgccaccccaagattcta gcccaactccaacaagagctggaccaagtagcggggcgggatcggctcat aaccgagtcggacctgcctaacttgacctacctccaagcagtaatcaagg aaacctttcggctacacccgtcaaccccgctctccctgcctcgaatggcg tccgagagttgcgaaatcaacgggttccacatccccaagggtgccactct tctggtcaacgtatgggccatatctcgcgacccggcccaatggtccgaac cgcttgagtttagacccgagcggttcttgccgggtggagagaagcccaat gtggacgtcaagggtaatgatttcgaggttataccgtttggggccgggcg gagaatatgcgccgggatgacccttgggctgcgtatggtgtctctaatga ccgcgaccctggtccatggttttgattggaccttggctgatgggctcaca cctgagaaattgaacatggacgaggcttatgggctcacactacaaagagc cgcaccattaatggtgcacccacgtaacaggctagcccctcatgcatata atgcgtcatcaccttga
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Coding sequence (CDS) from alignment at FJ919632:1069..4135+

>FJ919632.1-F3H.m1 ID=FJ919632.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=CDS|length=1536bp|location=Sequence derived from alignment at FJ919632:1069..4135+ (Malus x domestica)
atgtttgttctcatattcttcaccgttgtcttggccttcttcttatacag
gctcttcgcccccggcgggagccgccacgctcagccccttccaccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcactctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctctagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgaactt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
cggggcgggatcggctcataaccgagtcggacctgcctaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgaccgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga
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