F3H, FJ919631.1-F3H.m1 (mRNA) Malus x domestica

Transcript Overview
NameF3H
Unique NameFJ919631.1-F3H.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
F3HF3HMalus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
FJ919631.1-F3H.m1-cds1FJ919631.1-F3H.m1-cds1Malus x domesticaCDS
FJ919631.1-F3H.m1-cds2FJ919631.1-F3H.m1-cds2Malus x domesticaCDS
FJ919631.1-F3H.m1-cds3FJ919631.1-F3H.m1-cds3Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
F3HFJ919631.1-F3H.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI237687728
nuccoreFJ919631.1
Alignments
Feature NameTypeLocationAnalysis
FJ919631 region FJ919631:1371..4888+ NCBI Rosaceae gene and mRNA sequences
Chr14 chromosome Chr14:29630945..29634460+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr14 chromosome chr14:26508326..26511871- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr14 chromosome chr14:31153915..31157460+ Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productflavonoid 3' hydroxylase
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>FJ919631.1-F3H.m1 ID=FJ919631.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=1536bp
atgtttgttctcatagtcttcaccgtcgtctttgccttcttcttataccg
gatatttgcccctggcgggagccgtcactctctgcctcttccgccggggc
cgaaaccttggcctgtagtagggaacctgccccacttaggccccgttccc
caccactctctggcggctttggcccgtcagtatggacccctcatgcacct
ccgcttggggtttgttgacgtggttgttgccgcctccgcctccgtggcgt
cacagtttctgaagacccatgacgctaatttctcgagccggccacccaac
tccggcgccaagcatctcgcttacaactaccaagacttggtgttcgcgcc
gtacggtccacggtggcgattgttgcggaagatcagctccgtccatttgt
tctccggcaaggctctggatgatcttaaacacgttcgccaggaggaggta
ggtgtgcttgcacatggattagcaagtgcagggtcaaagccagtgaactt
ggcgcaactactgaacgtgtgcacggtgaacgccctagggcgggtgatgg
taggacggaggctcttcggcaacggcatgggcggcgaagacccaaaggcg
gatgagttcaagtccatggtggtggagatgatggtgttggccggagtatt
caacatcggcgacttcatcccctccctagagtggctggacttgcaggggg
tggcgggaaagatgaagaagctacacaagaggttcgatgccttcttgacc
gccattgttgaagagcacaagaggagccgcggagggaagcacgtcgacat
gctgacgacgttgctgtcgctcaaggaggatgccgacggtgagggcgcca
agctcacagacactgagattaaagctttgcttttgaacatgtttacagct
ggcactgacacgtcatcaagcacagtggaatgggccatagccgaactcct
tcgccaccccaaaattctagcccaactccaacaagagctggatcaagtcg
tgggtcgggaccggctcgtaaccgaatcggacctgcccaacctgacctac
ctccaagccgtgatcaaggaaaccttccggctccacccatccaccccgct
ctctcttccccgaatggcgaccgagagttgcgaaatcaacggatttcaca
ttcctaagggtgccactctcttggtcaacgtatgggccgtatctcgcgat
ccggatcaatggtccgaaccgctcgagtttaggcccgagcggttcatgtc
gggaggtgagaagcccaatgtcgacattagggggaatgacttcgaggtca
taccgttcggggccgggcgtagaatatgtgccgggatgagccttgggttg
cggatggtgtctctgatgactgcaaccctggtccatggttttgattggac
cttggccgatgggctgacccctgagaagttgaacatggacgaggcctatg
ggctcaccctacaaagagccgcaccgttaatggtgcacccgcgtaacagg
ctagcccctcatgcatacaatgcatcatcatcttga
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protein sequence of F3H

>FJ919631.1-F3H.p1 ID=FJ919631.1-F3H.p1|Name=F3H|organism=Malus x domestica|type=polypeptide|length=511bp
MFVLIVFTVVFAFFLYRIFAPGGSRHSLPLPPGPKPWPVVGNLPHLGPVP
HHSLAALARQYGPLMHLRLGFVDVVVAASASVASQFLKTHDANFSSRPPN
SGAKHLAYNYQDLVFAPYGPRWRLLRKISSVHLFSGKALDDLKHVRQEEV
GVLAHGLASAGSKPVNLAQLLNVCTVNALGRVMVGRRLFGNGMGGEDPKA
DEFKSMVVEMMVLAGVFNIGDFIPSLEWLDLQGVAGKMKKLHKRFDAFLT
AIVEEHKRSRGGKHVDMLTTLLSLKEDADGEGAKLTDTEIKALLLNMFTA
GTDTSSSTVEWAIAELLRHPKILAQLQQELDQVVGRDRLVTESDLPNLTY
LQAVIKETFRLHPSTPLSLPRMATESCEINGFHIPKGATLLVNVWAVSRD
PDQWSEPLEFRPERFMSGGEKPNVDIRGNDFEVIPFGAGRRICAGMSLGL
RMVSLMTATLVHGFDWTLADGLTPEKLNMDEAYGLTLQRAAPLMVHPRNR
LAPHAYNASSS
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mRNA from alignment at FJ919631:1371..4888+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>FJ919631.1-F3H.m1 ID=FJ919631.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=3518bp|location=Sequence derived from alignment at FJ919631:1371..4888+ (Malus x domestica)
atgtttgttctcatagtcttcaccgtcgtctttgccttcttcttataccg gatatttgcccctggcgggagccgtcactctctgcctcttccgccggggc cgaaaccttggcctgtagtagggaacctgccccacttaggccccgttccc caccactctctggcggctttggcccgtcagtatggacccctcatgcacct ccgcttggggtttgttgacgtggttgttgccgcctccgcctccgtggcgt cacagtttctgaagacccatgacgctaatttctcgagccggccacccaac tccggcgccaagcatctcgcttacaactaccaagacttggtgttcgcgcc gtacggtccacggtggcgattgttgcggaagatcagctccgtccatttgt tctccggcaaggctctggatgatcttaaacacgttcgccaggtcagcaat ccggccaatccggccgtcgtcttcattgacttcgtccctttttacgttga ttttccctacgtttcattattaatgcatgttttattaattttcaatcaat cggaaactgaaaaataaaagaaaaacgaactaaatcttgtttaagtgcaa tcgaaaacgttgattttccctatgatcttaagtgctgttctcaaaagcgc ttttagtcatttaaaagcatttctcaaattttgtttgcaaagtaattttt tcatttgggatatttaattacaatttgtaattgttttaatattataggag gaggtaggtgtgcttgcacatggattagcaagtgcagggtcaaagccagt gaacttggcgcaactactgaacgtgtgcacggtgaacgccctagggcggg tgatggtaggacggaggctcttcggcaacggcatgggcggcgaagaccca aaggcggatgagttcaagtccatggtggtggagatgatggtgttggccgg agtattcaacatcggcgacttcatcccctccctagagtggctggacttgc agggggtggcgggaaagatgaagaagctacacaagaggttcgatgccttc ttgaccgccattgttgaagagcacaagaggagccgcggagggaagcacgt cgacatgctgacgacgttgctgtcgctcaaggaggatgccgacggtgagg gcgccaagctcacagacactgagattaaagctttgcttttggtacgtagc tcctctctctctctctctctctctctctctctctctctctctctaaggga agtaattatttgaaacgatttttaatcttccacatatattttttttattt ggcctaacaaattcaatttgatcaatttaattgtaaaaaaaatgtgcagg aagtgaaaaattgatgtgcaacaatcaacccgcttaaatttaaattacct ataaaaaaaatctctttattaaattaaaataaagtaaaaagataatttgc tcttttatcgcaaaagaaaaccacaggtggtatgtaatttcgatacaaat attttttttcacatgtcttcgtaacatatctctaattttttaaaataaaa atataaaatcctctccactctcacgttttctctcactccctctatctttc atattcctctccaacttctcttttccatgtattttctaaaaacaaaataa cttctttcacatgcaaagtgtgtgggggcttatgacttttgcaaacaata atacaatatgtcgtaactcaattattgaattggacatgacatgtcaacgt tgtaaaagaatgaggattctggatcgcctatgtgataatctcggagatct tcaaatcaaattcgtttattgtacatcatatggtcattttttatcaagta ctatttatatttaatcataaattaaaaattataataatttacgaccgcac gatatatgatgatttgatataattgaagaatttctaaaatcctcgtaaag agattctggaaataatcctcattcctctttaaaaaaccttggatggcctc gaggtttctctttgtcttaattaatttactttttcctcaaaagaaaagaa cgtaaagatttttnccttatttatttttcaatttttttgggagactggca agctagaaagttaatatgcactatttttactaatttccccaaaattcaaa aaaaaaaaaacatttttactttttcttcctgttttcatatatttggtagg ttagaaaagtaattttcttttccagttggccacgtgacctctctctcacg tgaaactttaaaatatgtcattagtggatcccccccgctccttgactgtc aaactactacaaaaagctatttaaataaggataaagggactttttcggat tcttttcgtcgggatttgaatgatcaattaatcgtgttaatttattgtat cgtatgataagttttattaggtaatatataaatatttaattttaaattta aaacataaaataatttttatcacacgatatacgataaacagacagaaata tatgttctggagatcatcagattttctcgtaacttccacaccgcatgttt ttaaatattttcatacacttggcatgaatttggtgatcgaaattaaattt tgtaagatgaaagggatctgtctttttataatttatggcacatattaacg tgcaccttctggttctttaaaattgattcaggtgtcttactaaatattga gagatttttcaacggtgtccaagtgtaaaaatataactagttggacattt aaaaaaatgtttaacctattgtattacaacatttgatgtaccgtgctgtg tctgacataattaaaaatttatctcaaataccaaatgactgacccataat atttttcatgcacacagaacatgtttacagctggcactgacacgtcatca agcacagtggaatgggccatagccgaactccttcgccaccccaaaattct agcccaactccaacaagagctggatcaagtcgtgggtcgggaccggctcg taaccgaatcggacctgcccaacctgacctacctccaagccgtgatcaag gaaaccttccggctccacccatccaccccgctctctcttccccgaatggc gaccgagagttgcgaaatcaacggatttcacattcctaagggtgccactc tcttggtcaacgtatgggccgtatctcgcgatccggatcaatggtccgaa ccgctcgagtttaggcccgagcggttcatgtcgggaggtgagaagcccaa tgtcgacattagggggaatgacttcgaggtcataccgttcggggccgggc gtagaatatgtgccgggatgagccttgggttgcggatggtgtctctgatg actgcaaccctggtccatggttttgattggaccttggccgatgggctgac ccctgagaagttgaacatggacgaggcctatgggctcaccctacaaagag ccgcaccgttaatggtgcacccgcgtaacaggctagcccctcatgcatac aatgcatcatcatcttga
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Coding sequence (CDS) from alignment at FJ919631:1371..4888+

>FJ919631.1-F3H.m1 ID=FJ919631.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=CDS|length=1536bp|location=Sequence derived from alignment at FJ919631:1371..4888+ (Malus x domestica)
atgtttgttctcatagtcttcaccgtcgtctttgccttcttcttataccg
gatatttgcccctggcgggagccgtcactctctgcctcttccgccggggc
cgaaaccttggcctgtagtagggaacctgccccacttaggccccgttccc
caccactctctggcggctttggcccgtcagtatggacccctcatgcacct
ccgcttggggtttgttgacgtggttgttgccgcctccgcctccgtggcgt
cacagtttctgaagacccatgacgctaatttctcgagccggccacccaac
tccggcgccaagcatctcgcttacaactaccaagacttggtgttcgcgcc
gtacggtccacggtggcgattgttgcggaagatcagctccgtccatttgt
tctccggcaaggctctggatgatcttaaacacgttcgccaggaggaggta
ggtgtgcttgcacatggattagcaagtgcagggtcaaagccagtgaactt
ggcgcaactactgaacgtgtgcacggtgaacgccctagggcgggtgatgg
taggacggaggctcttcggcaacggcatgggcggcgaagacccaaaggcg
gatgagttcaagtccatggtggtggagatgatggtgttggccggagtatt
caacatcggcgacttcatcccctccctagagtggctggacttgcaggggg
tggcgggaaagatgaagaagctacacaagaggttcgatgccttcttgacc
gccattgttgaagagcacaagaggagccgcggagggaagcacgtcgacat
gctgacgacgttgctgtcgctcaaggaggatgccgacggtgagggcgcca
agctcacagacactgagattaaagctttgcttttgaacatgtttacagct
ggcactgacacgtcatcaagcacagtggaatgggccatagccgaactcct
tcgccaccccaaaattctagcccaactccaacaagagctggatcaagtcg
tgggtcgggaccggctcgtaaccgaatcggacctgcccaacctgacctac
ctccaagccgtgatcaaggaaaccttccggctccacccatccaccccgct
ctctcttccccgaatggcgaccgagagttgcgaaatcaacggatttcaca
ttcctaagggtgccactctcttggtcaacgtatgggccgtatctcgcgat
ccggatcaatggtccgaaccgctcgagtttaggcccgagcggttcatgtc
gggaggtgagaagcccaatgtcgacattagggggaatgacttcgaggtca
taccgttcggggccgggcgtagaatatgtgccgggatgagccttgggttg
cggatggtgtctctgatgactgcaaccctggtccatggttttgattggac
cttggccgatgggctgacccctgagaagttgaacatggacgaggcctatg
ggctcaccctacaaagagccgcaccgttaatggtgcacccgcgtaacagg
ctagcccctcatgcatacaatgcatcatcatcttga
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