BZIP17, HM122469.1-BZIP17.m1 (mRNA) Malus x domestica

Transcript Overview
NameBZIP17
Unique NameHM122469.1-BZIP17.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
BZIP17BZIP17Malus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HM122469.1-BZIP17.m1-cds1HM122469.1-BZIP17.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
BZIP17HM122469.1-BZIP17.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI302398627
nuccoreHM122469.1
Alignments
Feature NameTypeLocationAnalysis
HM122469 region HM122469:1..1734+ NCBI Rosaceae gene and mRNA sequences
Chr11 chromosome Chr11:4400378..4403395+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr11 chromosome chr11:4534543..4537562+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr11 chromosome chr11:4536564..4539841- Malus x domestica Whole Genome v1.0 Assembly & Annotation
Properties
Property NameValue
ProductBZIP domain class transcription factor
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>HM122469.1-BZIP17.m1 ID=HM122469.1-BZIP17.m1|Name=BZIP17|organism=Malus x domestica|type=mRNA|length=1734bp
atggcttcccctctcaatggcagcaacaggctctcccttgccatggagcg
cactggccaatggattttctcccaagatatcccgtcagatgttgtggttc
aagttggtgaagccaatttctctctacacaagttcatgcttgtggcgaaa
agcaaccgcataaggaagctgataatggagtctaaaaaaccggacctaac
gagaatcgacctctccgacgttcccggaggcccggagacgttcgagaagg
cggccaagttctgctacggcgtcaacttcgagatcacagtccacaacgtc
gccgccctccgttgcgcggcggagtatttggaaatgaccgaaaagtactg
cgacaacaacctcaccggccgcactgaagatttcttatctcaagtcgctc
tcatgagcctctccggcgccattgtcgtgctcaagtcctgcgaagatctc
cttcccatggcggaggacctcaaaatcgtacagaaatgcgtcgatgtcgc
cgcttccaaggcctcaatcgaagcaaaatttccgagtcgatcgccgacga
attggtggacagaggaattgtcgattttggacattgagttcttcggcaga
gttatctccgtgatgaagctacgcggcgggaaatcattgaccgtttccag
cgctatcataacttacgctgagaaatggctccgagatatcgtccgagacc
gctctggacccgccgcgaaattggccgcttcggacgactccgatctgcga
ctccaacaacgggagctgctggaatcgatcgtcgcgatcttaccgactga
gaaagctgcaatgccgatcaacttcctctgctgccttctcagatctgcga
ccttcgtcaaggcgtcgagcacgtgcaagaccgagctcgagaggcggatc
tcgtcggtcctggagcacgtgaccgtcgacgacctcctggtgctgtcgtt
cacctacgacggcgagaggctgttcgatctcgagagcgtgaggaggatta
tctccgggttcgtggagaaggagaagagcgtcgcggtcttcaacgccggc
gatttcagggaggtttgctcggcggagatgatcagagtcgcgaagactgt
cgacgcgtatcttggtgagatcgccacgtgtgttgagctcagtatctcga
agttcaatggcattgccaacctcatccccaagggcgcgcgtaaagtcgac
gatgatctctatcgtgccattgatatttacttgaaggcccatccgaacct
tgatgagatagagagggagaaggtgtgcagcgtaatggacgcattgaagt
tgtcatacgaagcgagagtccacgcttcacaaaacaaacgactccccgtt
caaatcgtactgcacgcgttgtattacgaccagctaaagctgaggagcgg
ggtggacgaaaacgacgtgcaagatgcaataacgacgaggagtcgggtgc
aacacgacgtgtcgttggcgagggagaacgaggagttgagaacggagttg
ttgaagatgaagatgtacattacggacatgcagaagactggctctgcagg
gattgcaacgacgtcgtctggtaaaggaggtggcgggcccaaaaaggcca
catttttctcgtctgtgtcgaagaaattggggaagttgaatcccttcaag
caagggtcgaaggacacatcgaatatcatagatgatggtgtggatatttc
caagcctagaaggagaaggttttctatttcttaa
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protein sequence of BZIP17

>HM122469.1-BZIP17.p1 ID=HM122469.1-BZIP17.p1|Name=BZIP17|organism=Malus x domestica|type=polypeptide|length=577bp
MASPLNGSNRLSLAMERTGQWIFSQDIPSDVVVQVGEANFSLHKFMLVAK
SNRIRKLIMESKKPDLTRIDLSDVPGGPETFEKAAKFCYGVNFEITVHNV
AALRCAAEYLEMTEKYCDNNLTGRTEDFLSQVALMSLSGAIVVLKSCEDL
LPMAEDLKIVQKCVDVAASKASIEAKFPSRSPTNWWTEELSILDIEFFGR
VISVMKLRGGKSLTVSSAIITYAEKWLRDIVRDRSGPAAKLAASDDSDLR
LQQRELLESIVAILPTEKAAMPINFLCCLLRSATFVKASSTCKTELERRI
SSVLEHVTVDDLLVLSFTYDGERLFDLESVRRIISGFVEKEKSVAVFNAG
DFREVCSAEMIRVAKTVDAYLGEIATCVELSISKFNGIANLIPKGARKVD
DDLYRAIDIYLKAHPNLDEIEREKVCSVMDALKLSYEARVHASQNKRLPV
QIVLHALYYDQLKLRSGVDENDVQDAITTRSRVQHDVSLARENEELRTEL
LKMKMYITDMQKTGSAGIATTSSGKGGGGPKKATFFSSVSKKLGKLNPFK
QGSKDTSNIIDDGVDISKPRRRRFSIS
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mRNA from alignment at HM122469:1..1734+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HM122469.1-BZIP17.m1 ID=HM122469.1-BZIP17.m1|Name=BZIP17|organism=Malus x domestica|type=mRNA|length=1734bp|location=Sequence derived from alignment at HM122469:1..1734+ (Malus x domestica)
atggcttcccctctcaatggcagcaacaggctctcccttgccatggagcg cactggccaatggattttctcccaagatatcccgtcagatgttgtggttc aagttggtgaagccaatttctctctacacaagttcatgcttgtggcgaaa agcaaccgcataaggaagctgataatggagtctaaaaaaccggacctaac gagaatcgacctctccgacgttcccggaggcccggagacgttcgagaagg cggccaagttctgctacggcgtcaacttcgagatcacagtccacaacgtc gccgccctccgttgcgcggcggagtatttggaaatgaccgaaaagtactg cgacaacaacctcaccggccgcactgaagatttcttatctcaagtcgctc tcatgagcctctccggcgccattgtcgtgctcaagtcctgcgaagatctc cttcccatggcggaggacctcaaaatcgtacagaaatgcgtcgatgtcgc cgcttccaaggcctcaatcgaagcaaaatttccgagtcgatcgccgacga attggtggacagaggaattgtcgattttggacattgagttcttcggcaga gttatctccgtgatgaagctacgcggcgggaaatcattgaccgtttccag cgctatcataacttacgctgagaaatggctccgagatatcgtccgagacc gctctggacccgccgcgaaattggccgcttcggacgactccgatctgcga ctccaacaacgggagctgctggaatcgatcgtcgcgatcttaccgactga gaaagctgcaatgccgatcaacttcctctgctgccttctcagatctgcga ccttcgtcaaggcgtcgagcacgtgcaagaccgagctcgagaggcggatc tcgtcggtcctggagcacgtgaccgtcgacgacctcctggtgctgtcgtt cacctacgacggcgagaggctgttcgatctcgagagcgtgaggaggatta tctccgggttcgtggagaaggagaagagcgtcgcggtcttcaacgccggc gatttcagggaggtttgctcggcggagatgatcagagtcgcgaagactgt cgacgcgtatcttggtgagatcgccacgtgtgttgagctcagtatctcga agttcaatggcattgccaacctcatccccaagggcgcgcgtaaagtcgac gatgatctctatcgtgccattgatatttacttgaaggcccatccgaacct tgatgagatagagagggagaaggtgtgcagcgtaatggacgcattgaagt tgtcatacgaagcgagagtccacgcttcacaaaacaaacgactccccgtt caaatcgtactgcacgcgttgtattacgaccagctaaagctgaggagcgg ggtggacgaaaacgacgtgcaagatgcaataacgacgaggagtcgggtgc aacacgacgtgtcgttggcgagggagaacgaggagttgagaacggagttg ttgaagatgaagatgtacattacggacatgcagaagactggctctgcagg gattgcaacgacgtcgtctggtaaaggaggtggcgggcccaaaaaggcca catttttctcgtctgtgtcgaagaaattggggaagttgaatcccttcaag caagggtcgaaggacacatcgaatatcatagatgatggtgtggatatttc caagcctagaaggagaaggttttctatttcttaa
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Coding sequence (CDS) from alignment at HM122469:1..1734+

>HM122469.1-BZIP17.m1 ID=HM122469.1-BZIP17.m1|Name=BZIP17|organism=Malus x domestica|type=CDS|length=1734bp|location=Sequence derived from alignment at HM122469:1..1734+ (Malus x domestica)
atggcttcccctctcaatggcagcaacaggctctcccttgccatggagcg
cactggccaatggattttctcccaagatatcccgtcagatgttgtggttc
aagttggtgaagccaatttctctctacacaagttcatgcttgtggcgaaa
agcaaccgcataaggaagctgataatggagtctaaaaaaccggacctaac
gagaatcgacctctccgacgttcccggaggcccggagacgttcgagaagg
cggccaagttctgctacggcgtcaacttcgagatcacagtccacaacgtc
gccgccctccgttgcgcggcggagtatttggaaatgaccgaaaagtactg
cgacaacaacctcaccggccgcactgaagatttcttatctcaagtcgctc
tcatgagcctctccggcgccattgtcgtgctcaagtcctgcgaagatctc
cttcccatggcggaggacctcaaaatcgtacagaaatgcgtcgatgtcgc
cgcttccaaggcctcaatcgaagcaaaatttccgagtcgatcgccgacga
attggtggacagaggaattgtcgattttggacattgagttcttcggcaga
gttatctccgtgatgaagctacgcggcgggaaatcattgaccgtttccag
cgctatcataacttacgctgagaaatggctccgagatatcgtccgagacc
gctctggacccgccgcgaaattggccgcttcggacgactccgatctgcga
ctccaacaacgggagctgctggaatcgatcgtcgcgatcttaccgactga
gaaagctgcaatgccgatcaacttcctctgctgccttctcagatctgcga
ccttcgtcaaggcgtcgagcacgtgcaagaccgagctcgagaggcggatc
tcgtcggtcctggagcacgtgaccgtcgacgacctcctggtgctgtcgtt
cacctacgacggcgagaggctgttcgatctcgagagcgtgaggaggatta
tctccgggttcgtggagaaggagaagagcgtcgcggtcttcaacgccggc
gatttcagggaggtttgctcggcggagatgatcagagtcgcgaagactgt
cgacgcgtatcttggtgagatcgccacgtgtgttgagctcagtatctcga
agttcaatggcattgccaacctcatccccaagggcgcgcgtaaagtcgac
gatgatctctatcgtgccattgatatttacttgaaggcccatccgaacct
tgatgagatagagagggagaaggtgtgcagcgtaatggacgcattgaagt
tgtcatacgaagcgagagtccacgcttcacaaaacaaacgactccccgtt
caaatcgtactgcacgcgttgtattacgaccagctaaagctgaggagcgg
ggtggacgaaaacgacgtgcaagatgcaataacgacgaggagtcgggtgc
aacacgacgtgtcgttggcgagggagaacgaggagttgagaacggagttg
ttgaagatgaagatgtacattacggacatgcagaagactggctctgcagg
gattgcaacgacgtcgtctggtaaaggaggtggcgggcccaaaaaggcca
catttttctcgtctgtgtcgaagaaattggggaagttgaatcccttcaag
caagggtcgaaggacacatcgaatatcatagatgatggtgtggatatttc
caagcctagaaggagaaggttttctatttcttaa
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