HMG1, EU780785.1-HMG1.m1 (mRNA) Pyrus pyrifolia

Transcript Overview
NameHMG1
Unique NameEU780785.1-HMG1.m1
TypemRNA
OrganismPyrus pyrifolia ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
HMG1HMG1Pyrus pyrifoliagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EU780785.1-HMG1.m1-cds1EU780785.1-HMG1.m1-cds1Pyrus pyrifoliaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
HMG1EU780785.1-HMG1.p1Pyrus pyrifoliapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI190610724
nuccoreEU780785.1
Alignments
Feature NameTypeLocationAnalysis
EU780785 region EU780785:1..1830+ NCBI Rosaceae gene and mRNA sequences
Properties
Property NameValue
Product3-hydroxy-3-methylglutaryl coenzyme A reductase 1
Sourcegenbank
Genbank notePphmgr1
Sequences
The following sequences are available for this feature:

mRNA sequence

>EU780785.1-HMG1.m1 ID=EU780785.1-HMG1.m1|Name=HMG1|organism=Pyrus pyrifolia|type=mRNA|length=1830bp
atggacgttcgccggcgatctacgatggatacacctgccaccaaggcccg
ctctgggccgatgaaggtgaatgtcgtggaccaagaggaagaggtcggtg
ccgtcggcgctaaggcctccgatgccctgccgctgcctttgtacctcact
aatggggtcttcttcaccctgtttttctccgttgtctactttcttcttac
tgcttggcgcgagaagatcaggacttctactcctctccacgtcgttaccc
tttctgagatcgtcgcgattctctcgttggtcgcttctgtgatttatctt
ctggggttcttcgggatcgagtttgttcagtcgttcattctccggccttc
caatgatgtttgttcggcccgatgtgaggaggaagatgatgagcgattta
tcttggaagaagatagtcgtaatggaccttgtggggccgctactgaccgc
ggttcaattctcccaacaccacctgttgcagaagttgccccaatagctgt
tgcacagcaagcttctgataaggaagtcatcctatcgacacctggcgatt
tcattacacaaccagtgtcggaggaagatgaggagatgatcaaatccgtc
ctcgcgggaacaattccttcgtactctctggagtcaaaactcggtgattg
caagagagctgctgcgattcggagggaggcgcttcagaggatcacaggga
agtctctggaagggctaccattggagggatttgattatgaatccattctg
ggtcagtgctgtgagatgccagttggttatgtgcagatacccgttggaat
agctgggcctttgttgcttgatgggagagagtattcggtgccaccgatgg
caactactgagggttgcttggttgccagcaccaaccgtggctgcaaagct
atcaacttgtccggcggagccaccagtgtgttgctgagagatgggatgac
cagagcgccttgtgtgaggttcaactctgctaagagagctgccgagttga
agttctacttggaagaccccaacaattatgacaccttgtccgcggttttc
aacaggtcaagcagattcggtaggcttcagacaattaagtgtgccattgc
tgggaagaacttgtacatgagattcacctgcagcaccggtgatgctatgg
ggatgaacatggtctccaaaggtgcgcaaaacgttttggatttcctccag
aacgacttccctgacatggatgtgattggaatttccggcaactactgctc
tgacaagaagcccgctgcggtgaactggatcgaaggtcgtggaaaatcgg
tggtctgtgaggctgtgatcaagggtgatgtggtgcagaaggtgttgaaa
accaatgtggcgtccctgtgcgagcttaacatgctcaagaaccttactgg
gtctgcaatggctggagccctcggtggattcaacgcacatgccagcaaca
tcgtctctgccatctacatcgctaccggccaagacccagctcagaatgtg
gagagttctcactgcattaccatgatggaacccatcaatgatgggcagga
ccttcacgtgtctgtcaccatgccttcaactgaggttggtactgttggag
gtgggacccaacttgcatctcaatcagcttgtctgaaccttcttggagtg
aagggtgctaacagggaggcaccaggatctaatgcaagattgttggccac
tgttgtggctggttctgttcttgctggagagctttctctcatgtctgcta
tctcagctggacagcttgtgaatagtcacatgaaatacaacagatcaagc
aaagatgtctcagctgttgcgtccgcttaa
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protein sequence of HMG1

>EU780785.1-HMG1.p1 ID=EU780785.1-HMG1.p1|Name=HMG1|organism=Pyrus pyrifolia|type=polypeptide|length=609bp
MDVRRRSTMDTPATKARSGPMKVNVVDQEEEVGAVGAKASDALPLPLYLT
NGVFFTLFFSVVYFLLTAWREKIRTSTPLHVVTLSEIVAILSLVASVIYL
LGFFGIEFVQSFILRPSNDVCSARCEEEDDERFILEEDSRNGPCGAATDR
GSILPTPPVAEVAPIAVAQQASDKEVILSTPGDFITQPVSEEDEEMIKSV
LAGTIPSYSLESKLGDCKRAAAIRREALQRITGKSLEGLPLEGFDYESIL
GQCCEMPVGYVQIPVGIAGPLLLDGREYSVPPMATTEGCLVASTNRGCKA
INLSGGATSVLLRDGMTRAPCVRFNSAKRAAELKFYLEDPNNYDTLSAVF
NRSSRFGRLQTIKCAIAGKNLYMRFTCSTGDAMGMNMVSKGAQNVLDFLQ
NDFPDMDVIGISGNYCSDKKPAAVNWIEGRGKSVVCEAVIKGDVVQKVLK
TNVASLCELNMLKNLTGSAMAGALGGFNAHASNIVSAIYIATGQDPAQNV
ESSHCITMMEPINDGQDLHVSVTMPSTEVGTVGGGTQLASQSACLNLLGV
KGANREAPGSNARLLATVVAGSVLAGELSLMSAISAGQLVNSHMKYNRSS
KDVSAVASA
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mRNA from alignment at EU780785:1..1830+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EU780785.1-HMG1.m1 ID=EU780785.1-HMG1.m1|Name=HMG1|organism=Pyrus pyrifolia|type=mRNA|length=1830bp|location=Sequence derived from alignment at EU780785:1..1830+ (Pyrus pyrifolia)
atggacgttcgccggcgatctacgatggatacacctgccaccaaggcccg ctctgggccgatgaaggtgaatgtcgtggaccaagaggaagaggtcggtg ccgtcggcgctaaggcctccgatgccctgccgctgcctttgtacctcact aatggggtcttcttcaccctgtttttctccgttgtctactttcttcttac tgcttggcgcgagaagatcaggacttctactcctctccacgtcgttaccc tttctgagatcgtcgcgattctctcgttggtcgcttctgtgatttatctt ctggggttcttcgggatcgagtttgttcagtcgttcattctccggccttc caatgatgtttgttcggcccgatgtgaggaggaagatgatgagcgattta tcttggaagaagatagtcgtaatggaccttgtggggccgctactgaccgc ggttcaattctcccaacaccacctgttgcagaagttgccccaatagctgt tgcacagcaagcttctgataaggaagtcatcctatcgacacctggcgatt tcattacacaaccagtgtcggaggaagatgaggagatgatcaaatccgtc ctcgcgggaacaattccttcgtactctctggagtcaaaactcggtgattg caagagagctgctgcgattcggagggaggcgcttcagaggatcacaggga agtctctggaagggctaccattggagggatttgattatgaatccattctg ggtcagtgctgtgagatgccagttggttatgtgcagatacccgttggaat agctgggcctttgttgcttgatgggagagagtattcggtgccaccgatgg caactactgagggttgcttggttgccagcaccaaccgtggctgcaaagct atcaacttgtccggcggagccaccagtgtgttgctgagagatgggatgac cagagcgccttgtgtgaggttcaactctgctaagagagctgccgagttga agttctacttggaagaccccaacaattatgacaccttgtccgcggttttc aacaggtcaagcagattcggtaggcttcagacaattaagtgtgccattgc tgggaagaacttgtacatgagattcacctgcagcaccggtgatgctatgg ggatgaacatggtctccaaaggtgcgcaaaacgttttggatttcctccag aacgacttccctgacatggatgtgattggaatttccggcaactactgctc tgacaagaagcccgctgcggtgaactggatcgaaggtcgtggaaaatcgg tggtctgtgaggctgtgatcaagggtgatgtggtgcagaaggtgttgaaa accaatgtggcgtccctgtgcgagcttaacatgctcaagaaccttactgg gtctgcaatggctggagccctcggtggattcaacgcacatgccagcaaca tcgtctctgccatctacatcgctaccggccaagacccagctcagaatgtg gagagttctcactgcattaccatgatggaacccatcaatgatgggcagga ccttcacgtgtctgtcaccatgccttcaactgaggttggtactgttggag gtgggacccaacttgcatctcaatcagcttgtctgaaccttcttggagtg aagggtgctaacagggaggcaccaggatctaatgcaagattgttggccac tgttgtggctggttctgttcttgctggagagctttctctcatgtctgcta tctcagctggacagcttgtgaatagtcacatgaaatacaacagatcaagc aaagatgtctcagctgttgcgtccgcttaa
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Coding sequence (CDS) from alignment at EU780785:1..1830+

>EU780785.1-HMG1.m1 ID=EU780785.1-HMG1.m1|Name=HMG1|organism=Pyrus pyrifolia|type=CDS|length=1830bp|location=Sequence derived from alignment at EU780785:1..1830+ (Pyrus pyrifolia)
atggacgttcgccggcgatctacgatggatacacctgccaccaaggcccg
ctctgggccgatgaaggtgaatgtcgtggaccaagaggaagaggtcggtg
ccgtcggcgctaaggcctccgatgccctgccgctgcctttgtacctcact
aatggggtcttcttcaccctgtttttctccgttgtctactttcttcttac
tgcttggcgcgagaagatcaggacttctactcctctccacgtcgttaccc
tttctgagatcgtcgcgattctctcgttggtcgcttctgtgatttatctt
ctggggttcttcgggatcgagtttgttcagtcgttcattctccggccttc
caatgatgtttgttcggcccgatgtgaggaggaagatgatgagcgattta
tcttggaagaagatagtcgtaatggaccttgtggggccgctactgaccgc
ggttcaattctcccaacaccacctgttgcagaagttgccccaatagctgt
tgcacagcaagcttctgataaggaagtcatcctatcgacacctggcgatt
tcattacacaaccagtgtcggaggaagatgaggagatgatcaaatccgtc
ctcgcgggaacaattccttcgtactctctggagtcaaaactcggtgattg
caagagagctgctgcgattcggagggaggcgcttcagaggatcacaggga
agtctctggaagggctaccattggagggatttgattatgaatccattctg
ggtcagtgctgtgagatgccagttggttatgtgcagatacccgttggaat
agctgggcctttgttgcttgatgggagagagtattcggtgccaccgatgg
caactactgagggttgcttggttgccagcaccaaccgtggctgcaaagct
atcaacttgtccggcggagccaccagtgtgttgctgagagatgggatgac
cagagcgccttgtgtgaggttcaactctgctaagagagctgccgagttga
agttctacttggaagaccccaacaattatgacaccttgtccgcggttttc
aacaggtcaagcagattcggtaggcttcagacaattaagtgtgccattgc
tgggaagaacttgtacatgagattcacctgcagcaccggtgatgctatgg
ggatgaacatggtctccaaaggtgcgcaaaacgttttggatttcctccag
aacgacttccctgacatggatgtgattggaatttccggcaactactgctc
tgacaagaagcccgctgcggtgaactggatcgaaggtcgtggaaaatcgg
tggtctgtgaggctgtgatcaagggtgatgtggtgcagaaggtgttgaaa
accaatgtggcgtccctgtgcgagcttaacatgctcaagaaccttactgg
gtctgcaatggctggagccctcggtggattcaacgcacatgccagcaaca
tcgtctctgccatctacatcgctaccggccaagacccagctcagaatgtg
gagagttctcactgcattaccatgatggaacccatcaatgatgggcagga
ccttcacgtgtctgtcaccatgccttcaactgaggttggtactgttggag
gtgggacccaacttgcatctcaatcagcttgtctgaaccttcttggagtg
aagggtgctaacagggaggcaccaggatctaatgcaagattgttggccac
tgttgtggctggttctgttcttgctggagagctttctctcatgtctgcta
tctcagctggacagcttgtgaatagtcacatgaaatacaacagatcaagc
aaagatgtctcagctgttgcgtccgcttaa
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