Xth2, DQ320658.2-Xth2.m1 (mRNA) Rosa x borboniana

Transcript Overview
NameXth2
Unique NameDQ320658.2-Xth2.m1
TypemRNA
OrganismRosa x borboniana ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
Xth2Xth2Rosa x borbonianagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
DQ320658.2-Xth2.m1-cds1DQ320658.2-Xth2.m1-cds1Rosa x borbonianaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Xth2DQ320658.2-Xth2.p1Rosa x borbonianapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI88604930
nuccoreDQ320658.2
Alignments
Feature NameTypeLocationAnalysis
DQ320658 region DQ320658:90..953+ NCBI Rosaceae gene and mRNA sequences
Properties
Property NameValue
Productxyloglucan endotransglucosylase/hydrolase 2
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>DQ320658.2-Xth2.m1 ID=DQ320658.2-Xth2.m1|Name=Xth2|organism=Rosa x borboniana|type=mRNA|length=864bp
atgaggagtagtgttactgcttctatttccctttgtttcctttcactatt
ttccctctcagcctttgcacgaccagccacttttcttcaggatttccaag
tcacatggtctgattctcatatcaggcaaatcgatggagggagggccatc
caactcgttcttgaccaaaactctggttgtggcttttcctccaaacacaa
gtacttgtttggccgtgtgagcatgaagatcaagctcattcccggtgact
ctgccggaactgtcaccgctttctatatgaactcggacacagatacagta
cgtgatgagcttgattttgagttcttggggaacaggactggacagcctta
cacagtccagaccaatatctatgctcgtggacagggtaacagggagcaaa
gggtgaacctctggtttgaccctgctgcagatttccacacttacacaatt
ctctggaaccatcaccatattgtcttctatgtagatgatgtgcctatcag
gctgtacaagaacaatgaagcgaaaggaatcccatacccaaagctccaac
ccatgggggtgttctcaacattgtgggaagctgatgattgggcaacaaga
ggagggcttgagaagataaactggagcaaagcccccttctatgcttatta
caaggactttgacatcgaaggatgctctgtgccaggaccagctaattgtg
cctcaagcactaataactggtgggaaggcactgcttaccaagcactcaat
gcccttgaatatagaagatacaagtgggttcgtatgaaccacatgatcta
cgattactgctccgacagatcccggttcccaaaacccccacccgagtgtg
tcgccggcctctaa
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protein sequence of Xth2

>DQ320658.2-Xth2.p1 ID=DQ320658.2-Xth2.p1|Name=Xth2|organism=Rosa x borboniana|type=polypeptide|length=287bp
MRSSVTASISLCFLSLFSLSAFARPATFLQDFQVTWSDSHIRQIDGGRAI
QLVLDQNSGCGFSSKHKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDTV
RDELDFEFLGNRTGQPYTVQTNIYARGQGNREQRVNLWFDPAADFHTYTI
LWNHHHIVFYVDDVPIRLYKNNEAKGIPYPKLQPMGVFSTLWEADDWATR
GGLEKINWSKAPFYAYYKDFDIEGCSVPGPANCASSTNNWWEGTAYQALN
ALEYRRYKWVRMNHMIYDYCSDRSRFPKPPPECVAGL
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mRNA from alignment at DQ320658:90..953+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>DQ320658.2-Xth2.m1 ID=DQ320658.2-Xth2.m1|Name=Xth2|organism=Rosa x borboniana|type=mRNA|length=864bp|location=Sequence derived from alignment at DQ320658:90..953+ (Rosa x borboniana)
atgaggagtagtgttactgcttctatttccctttgtttcctttcactatt ttccctctcagcctttgcacgaccagccacttttcttcaggatttccaag tcacatggtctgattctcatatcaggcaaatcgatggagggagggccatc caactcgttcttgaccaaaactctggttgtggcttttcctccaaacacaa gtacttgtttggccgtgtgagcatgaagatcaagctcattcccggtgact ctgccggaactgtcaccgctttctatatgaactcggacacagatacagta cgtgatgagcttgattttgagttcttggggaacaggactggacagcctta cacagtccagaccaatatctatgctcgtggacagggtaacagggagcaaa gggtgaacctctggtttgaccctgctgcagatttccacacttacacaatt ctctggaaccatcaccatattgtcttctatgtagatgatgtgcctatcag gctgtacaagaacaatgaagcgaaaggaatcccatacccaaagctccaac ccatgggggtgttctcaacattgtgggaagctgatgattgggcaacaaga ggagggcttgagaagataaactggagcaaagcccccttctatgcttatta caaggactttgacatcgaaggatgctctgtgccaggaccagctaattgtg cctcaagcactaataactggtgggaaggcactgcttaccaagcactcaat gcccttgaatatagaagatacaagtgggttcgtatgaaccacatgatcta cgattactgctccgacagatcccggttcccaaaacccccacccgagtgtg tcgccggcctctaa
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Coding sequence (CDS) from alignment at DQ320658:90..953+

>DQ320658.2-Xth2.m1 ID=DQ320658.2-Xth2.m1|Name=Xth2|organism=Rosa x borboniana|type=CDS|length=864bp|location=Sequence derived from alignment at DQ320658:90..953+ (Rosa x borboniana)
atgaggagtagtgttactgcttctatttccctttgtttcctttcactatt
ttccctctcagcctttgcacgaccagccacttttcttcaggatttccaag
tcacatggtctgattctcatatcaggcaaatcgatggagggagggccatc
caactcgttcttgaccaaaactctggttgtggcttttcctccaaacacaa
gtacttgtttggccgtgtgagcatgaagatcaagctcattcccggtgact
ctgccggaactgtcaccgctttctatatgaactcggacacagatacagta
cgtgatgagcttgattttgagttcttggggaacaggactggacagcctta
cacagtccagaccaatatctatgctcgtggacagggtaacagggagcaaa
gggtgaacctctggtttgaccctgctgcagatttccacacttacacaatt
ctctggaaccatcaccatattgtcttctatgtagatgatgtgcctatcag
gctgtacaagaacaatgaagcgaaaggaatcccatacccaaagctccaac
ccatgggggtgttctcaacattgtgggaagctgatgattgggcaacaaga
ggagggcttgagaagataaactggagcaaagcccccttctatgcttatta
caaggactttgacatcgaaggatgctctgtgccaggaccagctaattgtg
cctcaagcactaataactggtgggaaggcactgcttaccaagcactcaat
gcccttgaatatagaagatacaagtgggttcgtatgaaccacatgatcta
cgattactgctccgacagatcccggttcccaaaacccccacccgagtgtg
tcgccggcctctaa
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