C4H, EU123531.1-C4H.m1 (mRNA) Rubus coreanus

Transcript Overview
NameC4H
Unique NameEU123531.1-C4H.m1
TypemRNA
OrganismRubus coreanus ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
C4HC4HRubus coreanusgene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EU123531.1-C4H.m1-cds1EU123531.1-C4H.m1-cds1Rubus coreanusCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
C4HEU123531.1-C4H.p1Rubus coreanuspolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI161597779
nuccoreEU123531.1
Alignments
Feature NameTypeLocationAnalysis
EU123531 region EU123531:51..1565+ NCBI Rosaceae gene and mRNA sequences
Properties
Property NameValue
Productcinnamate-4-hydroxylase
Sourcegenbank
Genbank noteRcoC4H
Sequences
The following sequences are available for this feature:

mRNA sequence

>EU123531.1-C4H.m1 ID=EU123531.1-C4H.m1|Name=C4H|organism=Rubus coreanus|type=mRNA|length=1515bp
atggatctcctcctcatggagaagaccctcttggggctcttcgcagccgt
cgtcgtcgccataaccgtatccaagctccgcggcaagaaattcaagctcc
ccccgggtccgatacccgtccccgttttcggcaactggctccaggtcggc
gacgacctgaaccaccgcaatctgaccgacatggccaagaaattcggcga
ggtgttcatgctccgcatggggcagcgcaacctcgtcgtcgtgtcatcgc
cggacctcgccaaggaggtcctccacacgcagggagtcgagttcgggtca
aggacccgaaacgtggtcttcgacatcttcaccggaaaaggacaggacat
ggtgttcaccgtctacggcgagcactggcgcaaaatgcggcggatcatga
cggtcccgttcttcacgaacaaggtggtccagcagtaccgttacggatgg
gaatcggaggccgcggcggtggtggaggacgtgaaaaagcacccggaggc
ggcgaccaatgggatggtgctacgtaggcggctgcagcttatgatgtaca
acaacatgtacaggatcatgttcgatagaaggttcgagagcgaggacgac
ccgttgttcgtgaaattgaagggtttgaacggagagaggagccgattggc
gcagagcttcgagtacaactacggcgatttcattccggtgctcagaccct
tcttgaggggttacttgaacatctgtaaggaagtgaaggagaagaggatt
cagctgttcaaggactatttcgttgatgagagaaagaaactttcaagcac
acaagccacaactaacgaagggttgaagtgtgccattgaccacatcttgg
acgctcagcagaaaggagagatcaacgaggacaacgtcctttacatcgtc
gagaacattaacgttgccgcaattgaaaccgcactatggtcaatcgagtg
gggaattgccgagcttgtgaaccaccctgaaatccaaaagaagttgaggg
atgagctcgacactgttcttggccatggtgttcaagtcacggagcccgaa
attcaaaaactgccgtacctccaagctgtggtcaaagagactctaaggct
tcgcatggcaatccctctcctcgtcccacacatgaatcttcacgacgcaa
agctcggtggctttgacattccagctgagagcaagatcttggtcaatgct
tggtggcttgcaaacaaccctgcacactggaagaagcctgaggagttcag
gcccgagaggtttttggaagaagagtccaaagttgaggccaatggtaatg
acttcaggtaccttccatttggtgttgggaggaggagttgtcccgggatt
attttagcactgccgattctcgggattactttgggacgtttggtccagaa
ctttgagctcttgcctcctccaggacagactcagcttgacacgacagaga
aaggtggacaatttagtctgcacatcttgaagcattccaccatagtcatg
aagccaaggacataa
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protein sequence of C4H

>EU123531.1-C4H.p1 ID=EU123531.1-C4H.p1|Name=C4H|organism=Rubus coreanus|type=polypeptide|length=504bp
MDLLLMEKTLLGLFAAVVVAITVSKLRGKKFKLPPGPIPVPVFGNWLQVG
DDLNHRNLTDMAKKFGEVFMLRMGQRNLVVVSSPDLAKEVLHTQGVEFGS
RTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGW
ESEAAAVVEDVKKHPEAATNGMVLRRRLQLMMYNNMYRIMFDRRFESEDD
PLFVKLKGLNGERSRLAQSFEYNYGDFIPVLRPFLRGYLNICKEVKEKRI
QLFKDYFVDERKKLSSTQATTNEGLKCAIDHILDAQQKGEINEDNVLYIV
ENINVAAIETALWSIEWGIAELVNHPEIQKKLRDELDTVLGHGVQVTEPE
IQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNA
WWLANNPAHWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGI
ILALPILGITLGRLVQNFELLPPPGQTQLDTTEKGGQFSLHILKHSTIVM
KPRT
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mRNA from alignment at EU123531:51..1565+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EU123531.1-C4H.m1 ID=EU123531.1-C4H.m1|Name=C4H|organism=Rubus coreanus|type=mRNA|length=1515bp|location=Sequence derived from alignment at EU123531:51..1565+ (Rubus coreanus)
atggatctcctcctcatggagaagaccctcttggggctcttcgcagccgt cgtcgtcgccataaccgtatccaagctccgcggcaagaaattcaagctcc ccccgggtccgatacccgtccccgttttcggcaactggctccaggtcggc gacgacctgaaccaccgcaatctgaccgacatggccaagaaattcggcga ggtgttcatgctccgcatggggcagcgcaacctcgtcgtcgtgtcatcgc cggacctcgccaaggaggtcctccacacgcagggagtcgagttcgggtca aggacccgaaacgtggtcttcgacatcttcaccggaaaaggacaggacat ggtgttcaccgtctacggcgagcactggcgcaaaatgcggcggatcatga cggtcccgttcttcacgaacaaggtggtccagcagtaccgttacggatgg gaatcggaggccgcggcggtggtggaggacgtgaaaaagcacccggaggc ggcgaccaatgggatggtgctacgtaggcggctgcagcttatgatgtaca acaacatgtacaggatcatgttcgatagaaggttcgagagcgaggacgac ccgttgttcgtgaaattgaagggtttgaacggagagaggagccgattggc gcagagcttcgagtacaactacggcgatttcattccggtgctcagaccct tcttgaggggttacttgaacatctgtaaggaagtgaaggagaagaggatt cagctgttcaaggactatttcgttgatgagagaaagaaactttcaagcac acaagccacaactaacgaagggttgaagtgtgccattgaccacatcttgg acgctcagcagaaaggagagatcaacgaggacaacgtcctttacatcgtc gagaacattaacgttgccgcaattgaaaccgcactatggtcaatcgagtg gggaattgccgagcttgtgaaccaccctgaaatccaaaagaagttgaggg atgagctcgacactgttcttggccatggtgttcaagtcacggagcccgaa attcaaaaactgccgtacctccaagctgtggtcaaagagactctaaggct tcgcatggcaatccctctcctcgtcccacacatgaatcttcacgacgcaa agctcggtggctttgacattccagctgagagcaagatcttggtcaatgct tggtggcttgcaaacaaccctgcacactggaagaagcctgaggagttcag gcccgagaggtttttggaagaagagtccaaagttgaggccaatggtaatg acttcaggtaccttccatttggtgttgggaggaggagttgtcccgggatt attttagcactgccgattctcgggattactttgggacgtttggtccagaa ctttgagctcttgcctcctccaggacagactcagcttgacacgacagaga aaggtggacaatttagtctgcacatcttgaagcattccaccatagtcatg aagccaaggacataa
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Coding sequence (CDS) from alignment at EU123531:51..1565+

>EU123531.1-C4H.m1 ID=EU123531.1-C4H.m1|Name=C4H|organism=Rubus coreanus|type=CDS|length=1515bp|location=Sequence derived from alignment at EU123531:51..1565+ (Rubus coreanus)
atggatctcctcctcatggagaagaccctcttggggctcttcgcagccgt
cgtcgtcgccataaccgtatccaagctccgcggcaagaaattcaagctcc
ccccgggtccgatacccgtccccgttttcggcaactggctccaggtcggc
gacgacctgaaccaccgcaatctgaccgacatggccaagaaattcggcga
ggtgttcatgctccgcatggggcagcgcaacctcgtcgtcgtgtcatcgc
cggacctcgccaaggaggtcctccacacgcagggagtcgagttcgggtca
aggacccgaaacgtggtcttcgacatcttcaccggaaaaggacaggacat
ggtgttcaccgtctacggcgagcactggcgcaaaatgcggcggatcatga
cggtcccgttcttcacgaacaaggtggtccagcagtaccgttacggatgg
gaatcggaggccgcggcggtggtggaggacgtgaaaaagcacccggaggc
ggcgaccaatgggatggtgctacgtaggcggctgcagcttatgatgtaca
acaacatgtacaggatcatgttcgatagaaggttcgagagcgaggacgac
ccgttgttcgtgaaattgaagggtttgaacggagagaggagccgattggc
gcagagcttcgagtacaactacggcgatttcattccggtgctcagaccct
tcttgaggggttacttgaacatctgtaaggaagtgaaggagaagaggatt
cagctgttcaaggactatttcgttgatgagagaaagaaactttcaagcac
acaagccacaactaacgaagggttgaagtgtgccattgaccacatcttgg
acgctcagcagaaaggagagatcaacgaggacaacgtcctttacatcgtc
gagaacattaacgttgccgcaattgaaaccgcactatggtcaatcgagtg
gggaattgccgagcttgtgaaccaccctgaaatccaaaagaagttgaggg
atgagctcgacactgttcttggccatggtgttcaagtcacggagcccgaa
attcaaaaactgccgtacctccaagctgtggtcaaagagactctaaggct
tcgcatggcaatccctctcctcgtcccacacatgaatcttcacgacgcaa
agctcggtggctttgacattccagctgagagcaagatcttggtcaatgct
tggtggcttgcaaacaaccctgcacactggaagaagcctgaggagttcag
gcccgagaggtttttggaagaagagtccaaagttgaggccaatggtaatg
acttcaggtaccttccatttggtgttgggaggaggagttgtcccgggatt
attttagcactgccgattctcgggattactttgggacgtttggtccagaa
ctttgagctcttgcctcctccaggacagactcagcttgacacgacagaga
aaggtggacaatttagtctgcacatcttgaagcattccaccatagtcatg
aagccaaggacataa
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