SFBB18-gamma, EU081896.1-SFBB18-gamma.m1 (mRNA) Pyrus x bretschneideri

Transcript Overview
NameSFBB18-gamma
Unique NameEU081896.1-SFBB18-gamma.m1
TypemRNA
OrganismPyrus x bretschneideri ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
SFBB18-gammaSFBB18-gammaPyrus x bretschneiderigene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EU081896.1-SFBB18-gamma.m1-cds1EU081896.1-SFBB18-gamma.m1-cds1Pyrus x bretschneideriCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SFBB18-gammaEU081896.1-SFBB18-gamma.p1Pyrus x bretschneideripolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI156105285
nuccoreEU081896.1
Alignments
Feature NameTypeLocationAnalysis
EU081896 region EU081896:37..1227+ NCBI Rosaceae gene and mRNA sequences
scaffold01086 supercontig scaffold01086:55113..56303+ Pyrus communis Genome v1.0 Draft Assembly & Annotation
Properties
Property NameValue
ProductSFBB18-gamma
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>EU081896.1-SFBB18-gamma.m1 ID=EU081896.1-SFBB18-gamma.m1|Name=SFBB18-gamma|organism=Pyrus x bretschneideri|type=mRNA|length=1191bp
atgtctcaggtgcgtgaaagtgaaactcttgaagataggatggtcgaaat
cttgtccaggttgccacccaagtctctgatgcgattcaaatgcatacgca
aatcttggtgcactcttatcaatagtccatgttttgtggccaaacacctc
agcgattctgtggacaacaaactctcatcctccacttgtatccttctcaa
ctgttctcaggctcacgtttgctcggaaaagagttggaaacaagaagttt
catggtccgtgattaatctttccattgatggtgatgagcttcattatgat
attgaggacctaactattgtaccgtttctaaaggatggccctcatgaagt
agagattcacggttattgcgatgggattgtttgtgtaacagtagacgaaa
atttctttttgtgcaatcctgcaacgggggaattcaggcaacttcctgat
tcatgccttcttctaccccttcccggggtaaaagaaaaattcggattgga
aacgacacttaaaggactgggatttggttatgattgcaaagctaaagaat
acaaggttgtgcgaattatagataattatgatcgtgagtattcagaagat
ggagaaacatatatcgagcatattgctcttccttacactgctgaagtata
caccatggctgctaactcttggaaagagatcacgattgatatactaagta
aaatattatcatcatatagcgaaccatattcttattcagtgtatttgaag
gggttttgttattggttgtcatgcgatgtagaggaatacatattttcatt
tgatttagctaatgaaatatctgatatgatagaattgccttttaggggag
aattcggttttaaacgtgatggtatttttctgtacaatgaatccctcact
tattattgcagtagttatgaagagccttccacattatttgagatatgggt
aatggactacgatgatggatttaagagttcatggacaaaacacctaactg
ctggaccttttacagatatggagtttccattgacaccttggaaacgtgac
gagcttcttatgattgcctccgatggaagagctgcctcttataattcttg
taccggaaatttcaagtatcttcatattcctgttattattaatcagaata
gggttgtagattacgtgaaaagtattattctagtcaattga
back to top

protein sequence of SFBB18-gamma

>EU081896.1-SFBB18-gamma.p1 ID=EU081896.1-SFBB18-gamma.p1|Name=SFBB18-gamma|organism=Pyrus x bretschneideri|type=polypeptide|length=396bp
MSQVRESETLEDRMVEILSRLPPKSLMRFKCIRKSWCTLINSPCFVAKHL
SDSVDNKLSSSTCILLNCSQAHVCSEKSWKQEVSWSVINLSIDGDELHYD
IEDLTIVPFLKDGPHEVEIHGYCDGIVCVTVDENFFLCNPATGEFRQLPD
SCLLLPLPGVKEKFGLETTLKGLGFGYDCKAKEYKVVRIIDNYDREYSED
GETYIEHIALPYTAEVYTMAANSWKEITIDILSKILSSYSEPYSYSVYLK
GFCYWLSCDVEEYIFSFDLANEISDMIELPFRGEFGFKRDGIFLYNESLT
YYCSSYEEPSTLFEIWVMDYDDGFKSSWTKHLTAGPFTDMEFPLTPWKRD
ELLMIASDGRAASYNSCTGNFKYLHIPVIINQNRVVDYVKSIILVN
back to top

mRNA from alignment at EU081896:37..1227+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EU081896.1-SFBB18-gamma.m1 ID=EU081896.1-SFBB18-gamma.m1|Name=SFBB18-gamma|organism=Pyrus x bretschneideri|type=mRNA|length=1191bp|location=Sequence derived from alignment at EU081896:37..1227+ (Pyrus x bretschneideri)
atgtctcaggtgcgtgaaagtgaaactcttgaagataggatggtcgaaat cttgtccaggttgccacccaagtctctgatgcgattcaaatgcatacgca aatcttggtgcactcttatcaatagtccatgttttgtggccaaacacctc agcgattctgtggacaacaaactctcatcctccacttgtatccttctcaa ctgttctcaggctcacgtttgctcggaaaagagttggaaacaagaagttt catggtccgtgattaatctttccattgatggtgatgagcttcattatgat attgaggacctaactattgtaccgtttctaaaggatggccctcatgaagt agagattcacggttattgcgatgggattgtttgtgtaacagtagacgaaa atttctttttgtgcaatcctgcaacgggggaattcaggcaacttcctgat tcatgccttcttctaccccttcccggggtaaaagaaaaattcggattgga aacgacacttaaaggactgggatttggttatgattgcaaagctaaagaat acaaggttgtgcgaattatagataattatgatcgtgagtattcagaagat ggagaaacatatatcgagcatattgctcttccttacactgctgaagtata caccatggctgctaactcttggaaagagatcacgattgatatactaagta aaatattatcatcatatagcgaaccatattcttattcagtgtatttgaag gggttttgttattggttgtcatgcgatgtagaggaatacatattttcatt tgatttagctaatgaaatatctgatatgatagaattgccttttaggggag aattcggttttaaacgtgatggtatttttctgtacaatgaatccctcact tattattgcagtagttatgaagagccttccacattatttgagatatgggt aatggactacgatgatggatttaagagttcatggacaaaacacctaactg ctggaccttttacagatatggagtttccattgacaccttggaaacgtgac gagcttcttatgattgcctccgatggaagagctgcctcttataattcttg taccggaaatttcaagtatcttcatattcctgttattattaatcagaata gggttgtagattacgtgaaaagtattattctagtcaattga
back to top

Coding sequence (CDS) from alignment at EU081896:37..1227+

>EU081896.1-SFBB18-gamma.m1 ID=EU081896.1-SFBB18-gamma.m1|Name=SFBB18-gamma|organism=Pyrus x bretschneideri|type=CDS|length=1191bp|location=Sequence derived from alignment at EU081896:37..1227+ (Pyrus x bretschneideri)
atgtctcaggtgcgtgaaagtgaaactcttgaagataggatggtcgaaat
cttgtccaggttgccacccaagtctctgatgcgattcaaatgcatacgca
aatcttggtgcactcttatcaatagtccatgttttgtggccaaacacctc
agcgattctgtggacaacaaactctcatcctccacttgtatccttctcaa
ctgttctcaggctcacgtttgctcggaaaagagttggaaacaagaagttt
catggtccgtgattaatctttccattgatggtgatgagcttcattatgat
attgaggacctaactattgtaccgtttctaaaggatggccctcatgaagt
agagattcacggttattgcgatgggattgtttgtgtaacagtagacgaaa
atttctttttgtgcaatcctgcaacgggggaattcaggcaacttcctgat
tcatgccttcttctaccccttcccggggtaaaagaaaaattcggattgga
aacgacacttaaaggactgggatttggttatgattgcaaagctaaagaat
acaaggttgtgcgaattatagataattatgatcgtgagtattcagaagat
ggagaaacatatatcgagcatattgctcttccttacactgctgaagtata
caccatggctgctaactcttggaaagagatcacgattgatatactaagta
aaatattatcatcatatagcgaaccatattcttattcagtgtatttgaag
gggttttgttattggttgtcatgcgatgtagaggaatacatattttcatt
tgatttagctaatgaaatatctgatatgatagaattgccttttaggggag
aattcggttttaaacgtgatggtatttttctgtacaatgaatccctcact
tattattgcagtagttatgaagagccttccacattatttgagatatgggt
aatggactacgatgatggatttaagagttcatggacaaaacacctaactg
ctggaccttttacagatatggagtttccattgacaccttggaaacgtgac
gagcttcttatgattgcctccgatggaagagctgcctcttataattcttg
taccggaaatttcaagtatcttcatattcctgttattattaatcagaata
gggttgtagattacgtgaaaagtattattctagtcaattga
back to top