F3H, AY965339.1-F3H.m1 (mRNA) Malus x domestica

Transcript Overview
NameF3H
Unique NameAY965339.1-F3H.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
F3HF3HMalus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AY965339.1-F3H.m1-cds1AY965339.1-F3H.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
F3HAY965339.1-F3H.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI62632849
nuccoreAY965339.1
Alignments
Feature NameTypeLocationAnalysis
AY965339 region AY965339:1..1098+ NCBI Rosaceae gene and mRNA sequences
Chr02 chromosome Chr02:10684928..10686924- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr2 chromosome chr2:11329044..11331039+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr2 chromosome chr2:11905962..11907957- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productflavanon 3 beta-hydroxylase
Sourcegenbank
Genbank noteFHT; F3H
Sequences
The following sequences are available for this feature:

mRNA sequence

>AY965339.1-F3H.m1 ID=AY965339.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=1098bp
atggctcctgctactactacgctcacatccatagcgcatgagaaaaccct
acaacaaaaatttgtccgagacgaagacgagcgtccaaaggttgcctaca
acgacttcagcaacgaaattccgatcatctcgcttgccgggattgatgag
gtggaaggacgccggggcgagatttgcaagaagattgtagcggcttgtga
ggactggggtattttccagattgttgaccatggggttgatgctgagctca
tatcggaaatgaccggtctcgctagagagttctttgctttgccatcggag
gagaagctccgcttcgacatgtccggtggcaaaaagggtggcttcatcgt
gtccagtcatttacagggagaagctgtgcaagattggcgtgaaattgtga
cctacttttcatatccgattcgtcaccgggactattcgaggtggccagac
aagcctgaggcctggagggaggtgacaaagaagtacagtgacgagttgat
ggggctggcatgcaagctcttgggggttttatcagaagccatggggttgg
atacagaggcattgacaaaggcatgtgtggacatggaccaaaaagtcgtc
gtgaatttctacccaaaatgccctcagcccgacctaacccttggcctcaa
gcgccacaccgacccgggcacaattacccttctgcttcaagaccaagttg
ggggcctccaggctacacgggatgatgggaaaacgtggatcaccgttcaa
ccagtggaaggagcttttgtggtcaatcttggagatcatggtcatcttct
gagcaatgggaggttcaagaatgctgatcaccaagcagtggtgaactcaa
acagcaataggctgtccatagccacattccagaacccagcgcaagaagca
atagtgtatccactcagtgtgagggagggagagaagccgattctcgaggc
gccaatcacctacaccgagatgtacaagaagaagatgagcaaggatcttg
agcttgccaggctgaaaaaactgtccaaggaacagcaactgcaggacttg
gagaaagccaaagtggatacaaagccagtggacgacatttttgcttag
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protein sequence of F3H

>AY965339.1-F3H.p1 ID=AY965339.1-F3H.p1|Name=F3H|organism=Malus x domestica|type=polypeptide|length=365bp
MAPATTTLTSIAHEKTLQQKFVRDEDERPKVAYNDFSNEIPIISLAGIDE
VEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSE
EKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPD
KPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVV
VNFYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGKTWITVQ
PVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSNRLSIATFQNPAQEA
IVYPLSVREGEKPILEAPITYTEMYKKKMSKDLELARLKKLSKEQQLQDL
EKAKVDTKPVDDIFA
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mRNA from alignment at AY965339:1..1098+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AY965339.1-F3H.m1 ID=AY965339.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=mRNA|length=1098bp|location=Sequence derived from alignment at AY965339:1..1098+ (Malus x domestica)
atggctcctgctactactacgctcacatccatagcgcatgagaaaaccct acaacaaaaatttgtccgagacgaagacgagcgtccaaaggttgcctaca acgacttcagcaacgaaattccgatcatctcgcttgccgggattgatgag gtggaaggacgccggggcgagatttgcaagaagattgtagcggcttgtga ggactggggtattttccagattgttgaccatggggttgatgctgagctca tatcggaaatgaccggtctcgctagagagttctttgctttgccatcggag gagaagctccgcttcgacatgtccggtggcaaaaagggtggcttcatcgt gtccagtcatttacagggagaagctgtgcaagattggcgtgaaattgtga cctacttttcatatccgattcgtcaccgggactattcgaggtggccagac aagcctgaggcctggagggaggtgacaaagaagtacagtgacgagttgat ggggctggcatgcaagctcttgggggttttatcagaagccatggggttgg atacagaggcattgacaaaggcatgtgtggacatggaccaaaaagtcgtc gtgaatttctacccaaaatgccctcagcccgacctaacccttggcctcaa gcgccacaccgacccgggcacaattacccttctgcttcaagaccaagttg ggggcctccaggctacacgggatgatgggaaaacgtggatcaccgttcaa ccagtggaaggagcttttgtggtcaatcttggagatcatggtcatcttct gagcaatgggaggttcaagaatgctgatcaccaagcagtggtgaactcaa acagcaataggctgtccatagccacattccagaacccagcgcaagaagca atagtgtatccactcagtgtgagggagggagagaagccgattctcgaggc gccaatcacctacaccgagatgtacaagaagaagatgagcaaggatcttg agcttgccaggctgaaaaaactgtccaaggaacagcaactgcaggacttg gagaaagccaaagtggatacaaagccagtggacgacatttttgcttag
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Coding sequence (CDS) from alignment at AY965339:1..1098+

>AY965339.1-F3H.m1 ID=AY965339.1-F3H.m1|Name=F3H|organism=Malus x domestica|type=CDS|length=1098bp|location=Sequence derived from alignment at AY965339:1..1098+ (Malus x domestica)
atggctcctgctactactacgctcacatccatagcgcatgagaaaaccct
acaacaaaaatttgtccgagacgaagacgagcgtccaaaggttgcctaca
acgacttcagcaacgaaattccgatcatctcgcttgccgggattgatgag
gtggaaggacgccggggcgagatttgcaagaagattgtagcggcttgtga
ggactggggtattttccagattgttgaccatggggttgatgctgagctca
tatcggaaatgaccggtctcgctagagagttctttgctttgccatcggag
gagaagctccgcttcgacatgtccggtggcaaaaagggtggcttcatcgt
gtccagtcatttacagggagaagctgtgcaagattggcgtgaaattgtga
cctacttttcatatccgattcgtcaccgggactattcgaggtggccagac
aagcctgaggcctggagggaggtgacaaagaagtacagtgacgagttgat
ggggctggcatgcaagctcttgggggttttatcagaagccatggggttgg
atacagaggcattgacaaaggcatgtgtggacatggaccaaaaagtcgtc
gtgaatttctacccaaaatgccctcagcccgacctaacccttggcctcaa
gcgccacaccgacccgggcacaattacccttctgcttcaagaccaagttg
ggggcctccaggctacacgggatgatgggaaaacgtggatcaccgttcaa
ccagtggaaggagcttttgtggtcaatcttggagatcatggtcatcttct
gagcaatgggaggttcaagaatgctgatcaccaagcagtggtgaactcaa
acagcaataggctgtccatagccacattccagaacccagcgcaagaagca
atagtgtatccactcagtgtgagggagggagagaagccgattctcgaggc
gccaatcacctacaccgagatgtacaagaagaagatgagcaaggatcttg
agcttgccaggctgaaaaaactgtccaaggaacagcaactgcaggacttg
gagaaagccaaagtggatacaaagccagtggacgacatttttgcttag
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