HMG3, AY043491.2-HMG3.m1 (mRNA) Malus x domestica

Transcript Overview
NameHMG3
Unique NameAY043491.2-HMG3.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
HMG3HMG3Malus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AY043491.2-HMG3.m1-cds1AY043491.2-HMG3.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
HMG3AY043491.2-HMG3.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI71159371
nuccoreAY043491.2
Alignments
Feature NameTypeLocationAnalysis
AY043491 region AY043491:1..1140+ NCBI Rosaceae gene and mRNA sequences
Chr02 chromosome Chr02:8742015..8744240- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr2 chromosome chr2:8562396..8564622+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
Properties
Property NameValue
Product3-hydroxy-3-methylglutaryl coenzyme A reductase
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>AY043491.2-HMG3.m1 ID=AY043491.2-HMG3.m1|Name=HMG3|organism=Malus x domestica|type=mRNA|length=1140bp
aaacgcggttcgttcgctggagggcctgccgtggagggattcgattatcg
gtcgatactgggacagtgctgtgagaatccggtggggtatgtgcagatcc
cggtgggagtcgccggaccgctgcttctcgacggagaagagtacatggtg
ccaatggcgacaacggaggggtgcctggtggccagcaccaataggggatt
caaggcaatctacgcctcaggcggcgccgagagtgtcctcttcaacgact
ccatgaccagagctccaattgtgaggttccactccgtcgttagggctgct
cagctcaagttcttcgtcgagaaccctctcaattttgatgctctcgccgt
cgttttcaacatgtctagcagatttgcaaagctcgaaaagattcgatgcg
cgatagcaggcaggaatctgtacctaaggttttcatgcagcactggagat
gccatggggatgaacatgatctccaaaggcgtccaatgtgttatcgaatt
ccttcaaaatgaattcccagacatggaagttgttggcatctctggaaact
tctgctcagacaagaaagcagcagccgtaaattggattgaagggcgaggg
aaatcagtaacttgcgaggcagtcatcaaggaggaattggtgaggaaagt
actgaaaaccgatgtggattcccttgtgaagcttaacgtgaataaaaacc
ttgttgggtctgccatggctggtgctcttggcgggttcaacgcccacgcc
agcaatattgtctctgcagtcttcatagccactggccaggaccctgctca
gaatattgagagctctcactgcattaccttgatggaagccgacggcaatg
accttcatatctcagtcaccatgccttccattgaggtgggtacagttgga
ggaggaacacaactcgcatcccaatcagcctgcttgaacttgctcggtgt
caagggcgcaggcaaagactctccaggtttaaactcaaggcaactggcga
gaattgtagctggagctgtcctagcaggggagctttctctcatgtcagcc
atcgcatccgggcagctagtgaagagccacatgaaatacaaccgatctaa
cccagacgttgcaaaccttgcctcggtaaaacaccggtag
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protein sequence of HMG3

>AY043491.2-HMG3.p1 ID=AY043491.2-HMG3.p1|Name=HMG3|organism=Malus x domestica|type=polypeptide|length=379bp
KRGSFAGGPAVEGFDYRSILGQCCENPVGYVQIPVGVAGPLLLDGEEYMV
PMATTEGCLVASTNRGFKAIYASGGAESVLFNDSMTRAPIVRFHSVVRAA
QLKFFVENPLNFDALAVVFNMSSRFAKLEKIRCAIAGRNLYLRFSCSTGD
AMGMNMISKGVQCVIEFLQNEFPDMEVVGISGNFCSDKKAAAVNWIEGRG
KSVTCEAVIKEELVRKVLKTDVDSLVKLNVNKNLVGSAMAGALGGFNAHA
SNIVSAVFIATGQDPAQNIESSHCITLMEADGNDLHISVTMPSIEVGTVG
GGTQLASQSACLNLLGVKGAGKDSPGLNSRQLARIVAGAVLAGELSLMSA
IASGQLVKSHMKYNRSNPDVANLASVKHR
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mRNA from alignment at AY043491:1..1140+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AY043491.2-HMG3.m1 ID=AY043491.2-HMG3.m1|Name=HMG3|organism=Malus x domestica|type=mRNA|length=1140bp|location=Sequence derived from alignment at AY043491:1..1140+ (Malus x domestica)
aaacgcggttcgttcgctggagggcctgccgtggagggattcgattatcg gtcgatactgggacagtgctgtgagaatccggtggggtatgtgcagatcc cggtgggagtcgccggaccgctgcttctcgacggagaagagtacatggtg ccaatggcgacaacggaggggtgcctggtggccagcaccaataggggatt caaggcaatctacgcctcaggcggcgccgagagtgtcctcttcaacgact ccatgaccagagctccaattgtgaggttccactccgtcgttagggctgct cagctcaagttcttcgtcgagaaccctctcaattttgatgctctcgccgt cgttttcaacatgtctagcagatttgcaaagctcgaaaagattcgatgcg cgatagcaggcaggaatctgtacctaaggttttcatgcagcactggagat gccatggggatgaacatgatctccaaaggcgtccaatgtgttatcgaatt ccttcaaaatgaattcccagacatggaagttgttggcatctctggaaact tctgctcagacaagaaagcagcagccgtaaattggattgaagggcgaggg aaatcagtaacttgcgaggcagtcatcaaggaggaattggtgaggaaagt actgaaaaccgatgtggattcccttgtgaagcttaacgtgaataaaaacc ttgttgggtctgccatggctggtgctcttggcgggttcaacgcccacgcc agcaatattgtctctgcagtcttcatagccactggccaggaccctgctca gaatattgagagctctcactgcattaccttgatggaagccgacggcaatg accttcatatctcagtcaccatgccttccattgaggtgggtacagttgga ggaggaacacaactcgcatcccaatcagcctgcttgaacttgctcggtgt caagggcgcaggcaaagactctccaggtttaaactcaaggcaactggcga gaattgtagctggagctgtcctagcaggggagctttctctcatgtcagcc atcgcatccgggcagctagtgaagagccacatgaaatacaaccgatctaa cccagacgttgcaaaccttgcctcggtaaaacaccggtag
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Coding sequence (CDS) from alignment at AY043491:1..1140+

>AY043491.2-HMG3.m1 ID=AY043491.2-HMG3.m1|Name=HMG3|organism=Malus x domestica|type=CDS|length=1140bp|location=Sequence derived from alignment at AY043491:1..1140+ (Malus x domestica)
aaacgcggttcgttcgctggagggcctgccgtggagggattcgattatcg
gtcgatactgggacagtgctgtgagaatccggtggggtatgtgcagatcc
cggtgggagtcgccggaccgctgcttctcgacggagaagagtacatggtg
ccaatggcgacaacggaggggtgcctggtggccagcaccaataggggatt
caaggcaatctacgcctcaggcggcgccgagagtgtcctcttcaacgact
ccatgaccagagctccaattgtgaggttccactccgtcgttagggctgct
cagctcaagttcttcgtcgagaaccctctcaattttgatgctctcgccgt
cgttttcaacatgtctagcagatttgcaaagctcgaaaagattcgatgcg
cgatagcaggcaggaatctgtacctaaggttttcatgcagcactggagat
gccatggggatgaacatgatctccaaaggcgtccaatgtgttatcgaatt
ccttcaaaatgaattcccagacatggaagttgttggcatctctggaaact
tctgctcagacaagaaagcagcagccgtaaattggattgaagggcgaggg
aaatcagtaacttgcgaggcagtcatcaaggaggaattggtgaggaaagt
actgaaaaccgatgtggattcccttgtgaagcttaacgtgaataaaaacc
ttgttgggtctgccatggctggtgctcttggcgggttcaacgcccacgcc
agcaatattgtctctgcagtcttcatagccactggccaggaccctgctca
gaatattgagagctctcactgcattaccttgatggaagccgacggcaatg
accttcatatctcagtcaccatgccttccattgaggtgggtacagttgga
ggaggaacacaactcgcatcccaatcagcctgcttgaacttgctcggtgt
caagggcgcaggcaaagactctccaggtttaaactcaaggcaactggcga
gaattgtagctggagctgtcctagcaggggagctttctctcatgtcagcc
atcgcatccgggcagctagtgaagagccacatgaaatacaaccgatctaa
cccagacgttgcaaaccttgcctcggtaaaacaccggtag
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