SNP_FB_0765104, SNP_FB_0765104 (genetic_marker) Malus x domestica

Marker Overview
NameSNP_FB_0765104
AliasF_0765104_L8_PA
dbSNP ID.
SNP Array ID
480K SNP array for apple:AX-115198425
20K SNP array for apple:SNP_FB_0765104
TypeSNP
SNP AllelesA/G
Probe 1SNP_FB_0765104.probe: GATTTGGTGGCGGTCCGACCGAGTGAGGGCGGTTAGCTGAGAAACCGTTT
5' Flanking SequenceCCGGCACCAGAGCATTTACATTCCTGGATTTAGGTGGACTACTTCAAACTCTNTTCCTAG
3' Flanking SequenceAAACGGTTTCTCAGCTAACCGCCCTCACTCGGTCGGACCGCCACCAAATCCTCCGAATCG
SpeciesMalus x domestica
Primer 1SNP_FB_0765104.S8_104_For: GATTCGGAGGATTTGGTGGC
Primer 2SNP_FB_0765104.S8_104_TSP: GCTCTGAGAAACCGTTTG
Publication[view all]
ContactMichela Troggio
CommentTSP (Temperature Switch PCR) primers
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
S8_104_ForSNP_FB_0765104.S8_104_ForMalus x domesticaprimer
S8_104_TSPSNP_FB_0765104.S8_104_TSPMalus x domesticaprimer


The following probe feature(s) are associated with this genetic_marker:

Feature NameUnique NameSpeciesType
probeSNP_FB_0765104.probeMalus x domesticaprobe


Sequence
>SNP_FB_0765104 ID=SNP_FB_0765104|Name=SNP_FB_0765104|organism=Malus x domestica|type=genetic_marker|length=47bp
TTCCTAG[C/T]AAACGGTTTCTCAGCTAACCGCCCTCACTCGGTCG
Alignments
Feature NameTypeLocationAnalysis
Chr08 chromosome Chr08:27971609..27971609- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation