SFB12, KR149308.1-SFB12.m1 (mRNA) Eriobotrya japonica

Transcript Overview
NameSFB12
Unique NameKR149308.1-SFB12.m1
TypemRNA
OrganismEriobotrya japonica ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SFB12KR149308.1-SFB12Eriobotrya japonicagene


This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
SFB12SFB12Eriobotrya japonicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KR149308.1-SFB12.m1-cds1KR149308.1-SFB12.m1-cds1Eriobotrya japonicaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
SFB12KR149308.1-SFB12.p1Eriobotrya japonicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI931331392
nuccoreKR149308.1
Alignments
Feature NameTypeLocationAnalysis
KR149308 region KR149308:1..1135+ NCBI Rosaceae gene and mRNA sequences
Properties
Property NameValue
ProductS-haplotype-specific F-box protein
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>KR149308.1-SFB12.m1 ID=KR149308.1-SFB12.m1|Name=SFB12|organism=Eriobotrya japonica|type=mRNA|length=1135bp
atgtctcaggtgtgtgaaagtgaaactcctgaagatagaacggtcgaaat
cttgtccaggttaccacccaagtctctgatgcgattcaaatgcatacgca
aatcttggtgcactcttatcaatagtccatgttttgtggccaaacacctc
agcgattctgtggacaacaaactctcatcctccacttgtatccttctcaa
ctgttctcaggctcacgtttgctcggaagagagttggaaacaagaagtta
tatggtccgtgattaatctttccattgatggcgatgagcttcattatgat
attgaggacctaactaatgtaccgtttctaaaggatgaccatcatgaagt
agagattcacggttattgcgacgggattgtttgtgtaacagtagacgaaa
atttctttttgtgcaatcctgcaacgggggaattcaggcaacttcctgat
tcatgccttcttctaccccttcccggggtaaaagaaaaatttggattgga
aacgacccttaaaggtctgggatttggttatgattgcaaagctaaagaat
acaaggttgtgcgaattatagataattatgattgtgagtattcagatgat
ggagaaacatatatcgagcatattgctcttcctcacactgctgaagtata
caccatggccgctaactcttggaaagagatcacgattgatatattaagta
aaatattatcatcatatagcgaaccatattcttattcagtgtgtttgaaa
gggttttgttattggttgtcatgcgatgtagaggaatacatattttcatt
tgatttagctaatgaaatatctgatatgatagagttgccttttaggggag
aattcggttttaagcgtgatggtatttttctgtataatgaatccatcact
tattattgcactagttacgaggagccttccacattatttgaaatatgggt
aatggactacgatgacggatttaagagttcatggacaaaacacctaacag
ctggaccttttaaagacatggagtttccattgacaccttggaaacgtgac
gagcttcttatgattacctccgatggaagagctgcctcttataattcttg
taccgaaaatttcaagtatcttcatattcctgcga
back to top

protein sequence of SFB12

>KR149308.1-SFB12.p1 ID=KR149308.1-SFB12.p1|Name=SFB12|organism=Eriobotrya japonica|type=polypeptide|length=378bp
MSQVCESETPEDRTVEILSRLPPKSLMRFKCIRKSWCTLINSPCFVAKHL
SDSVDNKLSSSTCILLNCSQAHVCSEESWKQEVIWSVINLSIDGDELHYD
IEDLTNVPFLKDDHHEVEIHGYCDGIVCVTVDENFFLCNPATGEFRQLPD
SCLLLPLPGVKEKFGLETTLKGLGFGYDCKAKEYKVVRIIDNYDCEYSDD
GETYIEHIALPHTAEVYTMAANSWKEITIDILSKILSSYSEPYSYSVCLK
GFCYWLSCDVEEYIFSFDLANEISDMIELPFRGEFGFKRDGIFLYNESIT
YYCTSYEEPSTLFEIWVMDYDDGFKSSWTKHLTAGPFKDMEFPLTPWKRD
ELLMITSDGRAASYNSCTENFKYLHIPA
back to top

mRNA from alignment at KR149308:1..1135+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KR149308.1-SFB12.m1 ID=KR149308.1-SFB12.m1|Name=SFB12|organism=Eriobotrya japonica|type=mRNA|length=1135bp|location=Sequence derived from alignment at KR149308:1..1135+ (Eriobotrya japonica)
atgtctcaggtgtgtgaaagtgaaactcctgaagatagaacggtcgaaat cttgtccaggttaccacccaagtctctgatgcgattcaaatgcatacgca aatcttggtgcactcttatcaatagtccatgttttgtggccaaacacctc agcgattctgtggacaacaaactctcatcctccacttgtatccttctcaa ctgttctcaggctcacgtttgctcggaagagagttggaaacaagaagtta tatggtccgtgattaatctttccattgatggcgatgagcttcattatgat attgaggacctaactaatgtaccgtttctaaaggatgaccatcatgaagt agagattcacggttattgcgacgggattgtttgtgtaacagtagacgaaa atttctttttgtgcaatcctgcaacgggggaattcaggcaacttcctgat tcatgccttcttctaccccttcccggggtaaaagaaaaatttggattgga aacgacccttaaaggtctgggatttggttatgattgcaaagctaaagaat acaaggttgtgcgaattatagataattatgattgtgagtattcagatgat ggagaaacatatatcgagcatattgctcttcctcacactgctgaagtata caccatggccgctaactcttggaaagagatcacgattgatatattaagta aaatattatcatcatatagcgaaccatattcttattcagtgtgtttgaaa gggttttgttattggttgtcatgcgatgtagaggaatacatattttcatt tgatttagctaatgaaatatctgatatgatagagttgccttttaggggag aattcggttttaagcgtgatggtatttttctgtataatgaatccatcact tattattgcactagttacgaggagccttccacattatttgaaatatgggt aatggactacgatgacggatttaagagttcatggacaaaacacctaacag ctggaccttttaaagacatggagtttccattgacaccttggaaacgtgac gagcttcttatgattacctccgatggaagagctgcctcttataattcttg taccgaaaatttcaagtatcttcatattcctgcga
back to top

Coding sequence (CDS) from alignment at KR149308:1..1135+

>KR149308.1-SFB12.m1 ID=KR149308.1-SFB12.m1|Name=SFB12|organism=Eriobotrya japonica|type=CDS|length=1135bp|location=Sequence derived from alignment at KR149308:1..1135+ (Eriobotrya japonica)
atgtctcaggtgtgtgaaagtgaaactcctgaagatagaacggtcgaaat
cttgtccaggttaccacccaagtctctgatgcgattcaaatgcatacgca
aatcttggtgcactcttatcaatagtccatgttttgtggccaaacacctc
agcgattctgtggacaacaaactctcatcctccacttgtatccttctcaa
ctgttctcaggctcacgtttgctcggaagagagttggaaacaagaagtta
tatggtccgtgattaatctttccattgatggcgatgagcttcattatgat
attgaggacctaactaatgtaccgtttctaaaggatgaccatcatgaagt
agagattcacggttattgcgacgggattgtttgtgtaacagtagacgaaa
atttctttttgtgcaatcctgcaacgggggaattcaggcaacttcctgat
tcatgccttcttctaccccttcccggggtaaaagaaaaatttggattgga
aacgacccttaaaggtctgggatttggttatgattgcaaagctaaagaat
acaaggttgtgcgaattatagataattatgattgtgagtattcagatgat
ggagaaacatatatcgagcatattgctcttcctcacactgctgaagtata
caccatggccgctaactcttggaaagagatcacgattgatatattaagta
aaatattatcatcatatagcgaaccatattcttattcagtgtgtttgaaa
gggttttgttattggttgtcatgcgatgtagaggaatacatattttcatt
tgatttagctaatgaaatatctgatatgatagagttgccttttaggggag
aattcggttttaagcgtgatggtatttttctgtataatgaatccatcact
tattattgcactagttacgaggagccttccacattatttgaaatatgggt
aatggactacgatgacggatttaagagttcatggacaaaacacctaacag
ctggaccttttaaagacatggagtttccattgacaccttggaaacgtgac
gagcttcttatgattacctccgatggaagagctgcctcttataattcttg
taccgaaaatttcaagtatcttcatattcctgcga
back to top