CBFA, KU587042.1-CBFA.m1 (mRNA) Prunus mume

Transcript Overview
NameCBFA
Unique NameKU587042.1-CBFA.m1
TypemRNA
OrganismPrunus mume ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
CBFACBFAPrunus mumegene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KU587042.1-CBFA.m1-cds1KU587042.1-CBFA.m1-cds1Prunus mumeCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBFAKU587042.1-CBFA.p1Prunus mumepolypeptide


Cross References
External references for this mRNA
DatabaseAccession
nuccoreKU587042.1
Alignments
Feature NameTypeLocationAnalysis
KU587042 region KU587042:47..742+ NCBI Rosaceae gene and mRNA sequences
Properties
Property NameValue
ProductCBF/DREB1-like protein a
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>KU587042.1-CBFA.m1 ID=KU587042.1-CBFA.m1|Name=CBFA|organism=Prunus mume|type=mRNA|length=696bp
atggacatgttctccgctcagctttctaactcccccgaccagcccgagtc
gagttctttctccgacgccagcttcaccaccctgccggcttcttcctccg
acgaaaacgtcatattggcgtcgagccggccgaagaagcgcgctgggagg
agggttttcaaggagacgaggcacccggtttacaggggggtgaggagaag
gaacaacaacaagtgggtgtgtgagttgagagagccaaacaagaagaaat
caaggatttggcttggaacgtatccgactgctgagatggctgctcgtgcc
catgacgtggcggcattggcgttcagagggaagcttgcctgcataaactt
tgctgactccgcatggcggctgcccttgccggcttccatggataccatgg
atatccgaagggcagctgctgaggccgccgaagggttcaggccagcggag
ttcggtggattatccagctgcagcagtgatgagaaggagaagatttttag
cgtggatgtggaaaaaagcagcagcagcttgtgcttgttttatttggatg
aggaggaaatgtttgatatgccaaggttgattgataacatggctcaaggg
cttcttctttctccacctcaatgttcagctggctacttgaactgggatga
catggaaactgaagctgatgccaaactatggagtttctctatctga
back to top

protein sequence of CBFA

>KU587042.1-CBFA.p1 ID=KU587042.1-CBFA.p1|Name=CBFA|organism=Prunus mume|type=polypeptide|length=231bp
MDMFSAQLSNSPDQPESSSFSDASFTTLPASSSDENVILASSRPKKRAGR
RVFKETRHPVYRGVRRRNNNKWVCELREPNKKKSRIWLGTYPTAEMAARA
HDVAALAFRGKLACINFADSAWRLPLPASMDTMDIRRAAAEAAEGFRPAE
FGGLSSCSSDEKEKIFSVDVEKSSSSLCLFYLDEEEMFDMPRLIDNMAQG
LLLSPPQCSAGYLNWDDMETEADAKLWSFSI
back to top

mRNA from alignment at KU587042:47..742+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KU587042.1-CBFA.m1 ID=KU587042.1-CBFA.m1|Name=CBFA|organism=Prunus mume|type=mRNA|length=696bp|location=Sequence derived from alignment at KU587042:47..742+ (Prunus mume)
atggacatgttctccgctcagctttctaactcccccgaccagcccgagtc gagttctttctccgacgccagcttcaccaccctgccggcttcttcctccg acgaaaacgtcatattggcgtcgagccggccgaagaagcgcgctgggagg agggttttcaaggagacgaggcacccggtttacaggggggtgaggagaag gaacaacaacaagtgggtgtgtgagttgagagagccaaacaagaagaaat caaggatttggcttggaacgtatccgactgctgagatggctgctcgtgcc catgacgtggcggcattggcgttcagagggaagcttgcctgcataaactt tgctgactccgcatggcggctgcccttgccggcttccatggataccatgg atatccgaagggcagctgctgaggccgccgaagggttcaggccagcggag ttcggtggattatccagctgcagcagtgatgagaaggagaagatttttag cgtggatgtggaaaaaagcagcagcagcttgtgcttgttttatttggatg aggaggaaatgtttgatatgccaaggttgattgataacatggctcaaggg cttcttctttctccacctcaatgttcagctggctacttgaactgggatga catggaaactgaagctgatgccaaactatggagtttctctatctga
back to top

Coding sequence (CDS) from alignment at KU587042:47..742+

>KU587042.1-CBFA.m1 ID=KU587042.1-CBFA.m1|Name=CBFA|organism=Prunus mume|type=CDS|length=696bp|location=Sequence derived from alignment at KU587042:47..742+ (Prunus mume)
atggacatgttctccgctcagctttctaactcccccgaccagcccgagtc
gagttctttctccgacgccagcttcaccaccctgccggcttcttcctccg
acgaaaacgtcatattggcgtcgagccggccgaagaagcgcgctgggagg
agggttttcaaggagacgaggcacccggtttacaggggggtgaggagaag
gaacaacaacaagtgggtgtgtgagttgagagagccaaacaagaagaaat
caaggatttggcttggaacgtatccgactgctgagatggctgctcgtgcc
catgacgtggcggcattggcgttcagagggaagcttgcctgcataaactt
tgctgactccgcatggcggctgcccttgccggcttccatggataccatgg
atatccgaagggcagctgctgaggccgccgaagggttcaggccagcggag
ttcggtggattatccagctgcagcagtgatgagaaggagaagatttttag
cgtggatgtggaaaaaagcagcagcagcttgtgcttgttttatttggatg
aggaggaaatgtttgatatgccaaggttgattgataacatggctcaaggg
cttcttctttctccacctcaatgttcagctggctacttgaactgggatga
catggaaactgaagctgatgccaaactatggagtttctctatctga
back to top