Apple-M432-2013-physical-Malus-domestica

Map Overview

Click on any linkage group to explore this map further. You will be taken to MapViewer and leave this page.

NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Map Loci
This map contains 750 features:
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_21989766_Lg10_MDP0000131142_MAF10_MDP0000131142_exon1RosBREEDSNP_SNP_CT_21989766_Lg10_MDP0000131142_MAF10_MDP0000131142_exon1marker_locus21989766 bp
Apple-M432-2013-physical-Malus-domestica.16RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1marker_locus4428309 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_112151_Lg1_00288_MAF30_MDP0000524001_exon1RosBREEDSNP_SNP_CT_112151_Lg1_00288_MAF30_MDP0000524001_exon1marker_locus112151 bp
Apple-M432-2013-physical-Malus-domestica.1GDsnp00288GDsnp00288marker_locus154686 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_CT_16845711_Lg2_RosCOS836_MAF40_MDP0000677244_exon1RosBREEDSNP_SNP_CT_16845711_Lg2_RosCOS836_MAF40_MDP0000677244_exon1marker_locus16845711 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TG_9938879_Lg1_RosCOS404_MAF30_563387_exon1RosBREEDSNP_SNP_TG_9938879_Lg1_RosCOS404_MAF30_563387_exon1marker_locus9938879 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4RosBREEDSNP_SNP_AC_115951_Lg2_328024_MAF50_328024_exon4marker_locus115951 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CT_33432011_Lg14_218702_MAF30_218702_exon1RosBREEDSNP_SNP_CT_33432011_Lg14_218702_MAF30_218702_exon1marker_locus33432011 bp
Apple-M432-2013-physical-Malus-domestica.17RosBREEDSNP_SNP_CT_25284565_Lg17_MDP0000194307_MAF20_MDP0000194307_exon13RosBREEDSNP_SNP_CT_25284565_Lg17_MDP0000194307_MAF20_MDP0000194307_exon13marker_locus25284565 bp
Apple-M432-2013-physical-Malus-domestica.17RosBREEDSNP_SNP_GA_2378562_Lg17_MDP0000193812_MAF30_MDP0000193812_exon4RosBREEDSNP_SNP_GA_2378562_Lg17_MDP0000193812_MAF30_MDP0000193812_exon4marker_locus2378562 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_154698_Lg1_00288_MAF50_285078_exon1SNP_CT_154698_Lg1_00288_MAF50_285078_exon1marker_locus154698 bp
Apple-M432-2013-physical-Malus-domestica.15RosBREEDSNP_SNP_TC_18343847_Lg15_RosCOS1184_MAF40_MDP0000157185_exon1RosBREEDSNP_SNP_TC_18343847_Lg15_RosCOS1184_MAF40_MDP0000157185_exon1marker_locus18343847 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TC_12162359_Lg1_00420_MAF30_MDP0000205356_exon1RosBREEDSNP_SNP_TC_12162359_Lg1_00420_MAF30_MDP0000205356_exon1marker_locus12162359 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1marker_locus12378938 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_12166178_Lg1_00420_MAF10_1645316_exon1RosBREEDSNP_SNP_GA_12166178_Lg1_00420_MAF10_1645316_exon1marker_locus12166178 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3marker_locus14755288 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GT_14657993_Lg1_RosCOS1779_MAF30_MDP0000119296_exon1RosBREEDSNP_SNP_GT_14657993_Lg1_RosCOS1779_MAF30_MDP0000119296_exon1marker_locus14657993 bp
Apple-M432-2013-physical-Malus-domestica.17RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1marker_locus16518610 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_AG_17236158_Lg1_RosCOS3372_MAF30_45786_exon1RosBREEDSNP_SNP_AG_17236158_Lg1_RosCOS3372_MAF30_45786_exon1marker_locus17236158 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_17847470_Lg1_RosCOS3660_MAF20_389966_exon1RosBREEDSNP_SNP_CT_17847470_Lg1_RosCOS3660_MAF20_389966_exon1marker_locus17847470 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1marker_locus18100633 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_AG_18716844_Lg1_00183_MAF10_108132_exon1RosBREEDSNP_SNP_AG_18716844_Lg1_00183_MAF10_108132_exon1marker_locus18716844 bp
Apple-M432-2013-physical-Malus-domestica.7RosBREEDSNP_SNP_AG_25396939_Lg7_02291_MAF20_895524_exon1RosBREEDSNP_SNP_AG_25396939_Lg7_02291_MAF20_895524_exon1marker_locus25396939 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_18847005_Lg1_02731_MAF10_MDP0000619272_exon1RosBREEDSNP_SNP_CT_18847005_Lg1_02731_MAF10_MDP0000619272_exon1marker_locus18847005 bp
Apple-M432-2013-physical-Malus-domestica.6Pear_Bartlett_RosBREEDSNP_SNP_CT_605_5072112Pear_Bartlett_RosBREEDSNP_SNP_CT_605_5072112marker_locus605 bp
Page
1
...
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
Stock
NameTypeDetails
M.27_x_M.116population
Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
View Map