Apple-RGTxGD-F1-2015

Map Overview

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NameApple-RGTxGD-F1-2015
SpeciesMalus x domestica
SoftwareMapQTL® v5.0
Map typegenetic
Population typeF1
Population size116
Map unitcM
Maternal parentRenetta Grigia di Torriana
Paternal parentGolden Delicious
Number of loci1596
Number of QTL14
Number of linkage groups34
Publication[view all]
ContactStefano Tartarini
Map Loci
This map contains 1,596 features:
Linkage GroupMarker NameLocus NameTypePosition
Apple-RGTxGD-F1-2015.RGT_6RosBREEDSNP_SNP_AG_5232792_Lg6_00082_MAF50_1649239_exon1RosBREEDSNP_SNP_AG_5232792_Lg6_00082_MAF50_1649239_exon1marker_locus5.28 cM
Apple-RGTxGD-F1-2015.RGT_6CTG1059927CTG1059927marker_locus6.15 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0654636SNP_FB_0654636marker_locus7.91 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0655274SNP_FB_0655274marker_locus8.78 cM
Apple-RGTxGD-F1-2015.RGT_6CH03d07CH03d07marker_locus10.48 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0656440SNP_FB_0656440marker_locus10.53 cM
Apple-RGTxGD-F1-2015.RGT_6RosBREEDSNP_SNP_TC_11991962_Lg6_01366_MAF40_1642277_exon2RosBREEDSNP_SNP_TC_11991962_Lg6_01366_MAF40_1642277_exon2marker_locus11.4 cM
Apple-RGTxGD-F1-2015.RGT_6CTG1071135CTG1071135marker_locus14.04 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0225029SNP_FB_0225029marker_locus14.06 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_1008747SNP_FB_1008747marker_locus16.71 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0668511SNP_FB_0668511marker_locus18.47 cM
Apple-RGTxGD-F1-2015.RGT_6RosBREEDSNP_SNP_GT_19565705_Lg6_00787_MAF40_1641089_exon1RosBREEDSNP_SNP_GT_19565705_Lg6_00787_MAF40_1641089_exon1marker_locus19.34 cM
Apple-RGTxGD-F1-2015.RGT_6RosBREEDSNP_SNP_AG_20428062_Lg6_00472_MAF30_1618489_exon10RosBREEDSNP_SNP_AG_20428062_Lg6_00472_MAF30_1618489_exon10marker_locus21.99 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0670812SNP_FB_0670812marker_locus24.65 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_1013529SNP_FB_1013529marker_locus26.4 cM
Apple-RGTxGD-F1-2015.RGT_6RosBREEDSNP_SNP_TG_21088776_Lg6_155895__155895_exon1RosBREEDSNP_SNP_TG_21088776_Lg6_155895__155895_exon1marker_locus27.27 cM
Apple-RGTxGD-F1-2015.RGT_6CH03d12CH03d12marker_locus29.68 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0672949SNP_FB_0672949marker_locus29.93 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_1009622SNP_FB_1009622marker_locus41.52 cM
Apple-RGTxGD-F1-2015.RGT_6CN445290-SSRCN445290-SSRmarker_locus46.97 cM
Apple-RGTxGD-F1-2015.RGT_6RosBREEDSNP_SNP_AG_25957598_Lg6_01682_MAF20_1661685_exon1RosBREEDSNP_SNP_AG_25957598_Lg6_01682_MAF20_1661685_exon1marker_locus46.98 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0679434SNP_FB_0679434marker_locus47.85 cM
Apple-RGTxGD-F1-2015.RGT_6CTG1059711CTG1059711marker_locus48.72 cM
Apple-RGTxGD-F1-2015.RGT_6RosBREEDSNP_SNP_GA_27468669_Lg6_RosCOS1040_MAF40_1666047_exon1RosBREEDSNP_SNP_GA_27468669_Lg6_RosCOS1040_MAF40_1666047_exon1marker_locus49.58 cM
Apple-RGTxGD-F1-2015.RGT_6SNP_FB_0681295SNP_FB_0681295marker_locus50.45 cM
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Publication
YearPublications
2015Luigi Falginella, Guido Cipriani, Corinne Monte, Roberto Gregori, Raffaele Testolin, Riccardo Velasco, Michela Troggio, Stefano Tartarini. A major QTL controlling apple skin russeting maps on the linkage group 12 of ‘Renetta Grigia di Torriana’. BMC Plant Biology. 2015; 15:150.
Stock
NameTypeDetails
RGT_x_GDpopulation
Contact
NameDetails
Stefano Tartarini
First name:Stefano
Last name:Tartarini
Institution:University of Bologna
Address:Department of Agricultural Sciences, University of Bologna, Via Fanin 44, 40127 Bologna, Italy
Country:Italy
Email:stefano.tartarini@unibo.it
Map QTL
This map contains 14 QTL:
Linkage GroupNameTypeStartStopPeak
Apple-RGTxGD-F1-2015.RGT_12qFR.RGTGD-RGT_12.2010QTL--53.54 cM
Apple-RGTxGD-F1-2015.RGT_12qFR.RGTGD-RGT_12.2011QTL--53.54 cM
Apple-RGTxGD-F1-2015.RGT_12qFR.RGTGD-RGT_12.2012QTL--53.54 cM
Apple-RGTxGD-F1-2015.RGT_12qFR.RGTGD-RGT_12.2013.1QTL--53.54 cM
Apple-RGTxGD-F1-2015.RGT_12qFR.RGTGD-RGT_12.2013.2QTL--53.54 cM
Apple-RGTxGD-F1-2015.GD_2qFR.RGTGD-GD_02.2013.2QTL--11.02 cM
Apple-RGTxGD-F1-2015.GD_2qFR.RGTGD-GD_02.2011QTL--11.29 cM
Apple-RGTxGD-F1-2015.GD_2qFR.RGTGD-GD_02.2013.1QTL--12.49 cM
Apple-RGTxGD-F1-2015.GD_10qFR.RGTGD-GD_10.2012QTL--8.99 cM
Apple-RGTxGD-F1-2015.GD_10qFR.RGTGD-GD_10.2011QTL--9.43 cM
Apple-RGTxGD-F1-2015.GD_10qFR.RGTGD-GD_10.2010QTL--11.14 cM
Apple-RGTxGD-F1-2015.GD_11qFR.RGTGD-GD_11.2012QTL--8.83 cM
Apple-RGTxGD-F1-2015.GD_11qFR.RGTGD-GD_11.2010QTL--9.04 cM
Apple-RGTxGD-F1-2015.GD_11qFR.RGTGD-GD_11.2011QTL--9.82 cM
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