Filling gaps with construction of a genetic linkage map in tetraploid roses

Publication Overview
TitleFilling gaps with construction of a genetic linkage map in tetraploid roses
AuthorsYu C, Luo L, Pan H, Guo X, Wan H, Zhang Q
TypeJournal Article
Journal NameFrontiers in plant science
Volume5
Year2015
Page(s)796
CitationYu C, Luo L, Pan H, Guo X, Wan H, Zhang Q. Filling gaps with construction of a genetic linkage map in tetraploid roses. Frontiers in plant science. 2015; 5:796.

Abstract

Rose (Rosa sp.) is one of the most economically important ornamental crops worldwide. The present work contains a genetic linkage map for tetraploid roses that was constructed from an F1 segregation population using AFLPs and SSRs on 189 individuals. The preliminary ‘Yunzheng Xiawei’ and ‘Sun City’ maps consisted of 298 and 255 markers arranged into 26 and 32 linkage groups, respectively. The recombined parental maps covered 737 and 752 cM of the genome, respectively. The integrated linkage map was composed of 295 polymorphic markers that spanned 874 cM, and it had a mean intermarker distance of 2.9 cM. In addition, a set of newly developed EST-SSRs that are distributed evenly throughout the mapping population were released. The work identified 67 anchoring points that came from 43 common SSRs. The results that were produced from a large number of individuals (189) and polymorphic SSRs (242) will enhance the ability to construct higher density consensus maps with the available diploid level rose maps, and they will definitely serve as a tool for accurate QTL detection and marker assisted selection.
Features
This publication contains information about 133 features:
Feature NameUniquenameType
Rs_596Rs_596genetic_marker
Rs_598Rs_598genetic_marker
Rs_608Rs_608genetic_marker
Rs_609Rs_609genetic_marker
Rs_610Rs_610genetic_marker
Rs_623Rs_623genetic_marker
Rs_625Rs_625genetic_marker
Rs_628Rs_628genetic_marker
Rs_629Rs_629genetic_marker
Rs_634Rs_634genetic_marker
Rs_636Rs_636genetic_marker
Rs_637Rs_637genetic_marker
Rs_643Rs_643genetic_marker
Rs_645Rs_645genetic_marker
Rs_648Rs_648genetic_marker
Rs_650Rs_650genetic_marker
Rs_651Rs_651genetic_marker
Rs_653Rs_653genetic_marker
Rs_655Rs_655genetic_marker
Rs_660Rs_660genetic_marker
Rs_662Rs_662genetic_marker
Rs_669Rs_669genetic_marker
Rs_670Rs_670genetic_marker
Rs_679Rs_679genetic_marker
Rs_682Rs_682genetic_marker

Pages

Featuremaps
This publication contains information about 3 maps:
Map Name
Rose-Yunzheng_Xiawei-F1
Rose-Sun_City-F1
Rose-YXxSC_integrated-F1
Stocks
This publication contains information about 3 stocks:
Stock NameUniquenameType
Yunzheng XiaweiYunzheng Xiaweiaccession
Sun CitySun Cityaccession
Yunzheng_Xiawei_x_Sun_City-F1Yunzheng_Xiawei_x_Sun_City-F1population