Skip to main content
Toggle navigation
Species
Fragaria (all species)
Fragaria vesca
Fragaria x ananassa (strawberry)
Malus (all species)
Malus x domestica
Prunus (all species)
Prunus armeniaca (apricot)
Prunus avium and cerasus (sweet & tart cherry)
Prunus dulcis (almond)
Prunus persica (peach)
Prunus serotina (black cherry)
Pyrus (all species)
Pyrus communis (European pear)
Rosa (all species)
Rubus (all species)
Rubus occidentalis
All Species
Data
Data Contributors
Data Overview
Data Submission
Disclaimer
Download Data
GDR Marker Types
Gene Class
Genome Data
NCBI RNASeq and DNA Datasets
Pan-genome Data
Publication Datasets
Rosaceae Trait Ontology
Search
Search Genes and Transcripts
Search Genotype (GIGWA)
Search Genotype
Search Germplasm
Search Germplasm Images
Search Haplotype Block
Search Maps
Search Markers
Search Markers by Locus
Search Orthologs and Paralogs
Search Publications
Search QTL/GWAS
Search Sequences
Search Trait Name
Search Trait Descriptor
Search Trait Evaluation
MegaSearch
Tools
BIMS
BLAST+
Expression Heatmap
GDRCyc
GIGWA (Explore Genotype Data)
JBrowse
MapViewer
Primer3
Sequence Retrieval
Synteny Viewer
View Pan-genome
Breeding Software Tools
Other Resources
General
About
Cite GDR
GDR Citations
Newsletters
GDR Email Archive
News Archives
People
Presentations
Steering Committee
Usage
Work Completed
Work in Progress
Help
Contact
User Manual
GDR Video Tutorials
Gene Naming Guideline
Genome Naming Guideline
Community
Conferences
Employment
Mailing Lists
Mailing List Archives
RosIGI
USRosExec
Community Projects
Search form
Search
Login
Display Syntenic Blocks
Block ID
mdpuB1120
Organism A
Apple
Location A
Chr05_GDDH13v1.1 : 46191220 - 47492239
Organism B
Location B
Chr9_pdr1_v1.0 : 16351497 - 17610209
Gene A
Gene B
e-value
MD05G1341500
Pdr9g014160.1
6e-28
MD05G1341600
NA
NA
MD05G1341700
NA
NA
MD05G1341800
NA
NA
MD05G1341900
NA
NA
MD05G1342000
NA
NA
NA
Pdr9g014140.1
NA
NA
Pdr9g014130.2
NA
NA
Pdr9g014120.1
NA
MD05G1342200
Pdr9g014110.1
0
MD05G1342300
NA
NA
MD05G1342400
NA
NA
MD05G1342500
NA
NA
MD05G1342600
NA
NA
MD05G1342700
NA
NA
MD05G1342800
NA
NA
MD05G1342900
NA
NA
MD05G1343000
NA
NA
MD05G1343100
NA
NA
MD05G1343200
NA
NA
MD05G1343300
NA
NA
MD05G1343500
NA
NA
MD05G1343600
NA
NA
MD05G1343700
NA
NA
MD05G1343800
NA
NA
MD05G1343900
NA
NA
MD05G1344000
NA
NA
MD05G1344100
NA
NA
MD05G1344200
NA
NA
NA
Pdr9g014100.1
NA
NA
Pdr9g014090.1
NA
NA
Pdr9g014080.1
NA
NA
Pdr9g014070.1
NA
NA
Pdr9g014060.1
NA
NA
Pdr9g014050.1
NA
NA
Pdr9g014030.1
NA
NA
Pdr9g014020.1
NA
NA
Pdr9g014010.1
NA
NA
Pdr9g014000.1
NA
NA
Pdr9g013990.1
NA
NA
Pdr9g013970.1
NA
MD05G1344300
Pdr9g013960.1
0
MD05G1344400
NA
NA
MD05G1344500
NA
NA
MD05G1344700
Pdr9g013950.1
1e-21
MD05G1344800
NA
NA
MD05G1344900
NA
NA
MD05G1345000
NA
NA
MD05G1345100
NA
NA
MD05G1345200
NA
NA
MD05G1345300
NA
NA
MD05G1345400
NA
NA
MD05G1345500
NA
NA
MD05G1345600
NA
NA
MD05G1345700
NA
NA
MD05G1345800
NA
NA
MD05G1346200
NA
NA
MD05G1346500
NA
NA
MD05G1346800
NA
NA
MD05G1346900
NA
NA
MD05G1347100
NA
NA
MD05G1347200
NA
NA
MD05G1347300
NA
NA
MD05G1347400
NA
NA
MD05G1347500
NA
NA
NA
Pdr9g013940.1
NA
NA
Pdr9g013930.1
NA
NA
Pdr9g013920.1
NA
NA
Pdr9g013910.1
NA
NA
Pdr9g013900.1
NA
NA
Pdr9g013890.1
NA
MD05G1347600
Pdr9g013880.1
0
MD05G1347700
Pdr9g013860.1
7e-69
MD05G1347800
NA
NA
MD05G1347900
NA
NA
MD05G1348000
NA
NA
MD05G1348100
NA
NA
MD05G1348200
NA
NA
MD05G1348300
NA
NA
NA
Pdr9g013850.1
NA
NA
Pdr9g013840.1
NA
NA
Pdr9g013830.1
NA
NA
Pdr9g013800.1
NA
NA
Pdr9g013790.1
NA
MD05G1348500
Pdr9g013780.1
0
MD05G1348900
NA
NA
MD05G1349100
NA
NA
MD05G1349200
NA
NA
MD05G1349300
NA
NA
MD05G1349400
NA
NA
NA
Pdr9g013770.1
NA
NA
Pdr9g013760.1
NA
MD05G1349500
Pdr9g013750.1
2e-76
NA
Pdr9g013740.1
NA
MD05G1349600
Pdr9g013730.1
3e-111
MD05G1349700
Pdr9g013720.1
0
MD05G1349800
Pdr9g013710.1
3e-164
MD05G1349900
NA
NA
MD05G1350000
NA
NA
MD05G1350300
NA
NA
MD05G1350400
NA
NA
MD05G1350500
NA
NA
MD05G1350600
NA
NA
MD05G1350700
NA
NA
MD05G1350800
NA
NA
NA
Pdr9g013690.1
NA
NA
Pdr9g013680.1
NA
NA
Pdr9g013670.1
NA
NA
Pdr9g013660.1
NA
NA
Pdr9g013650.1
NA
NA
Pdr9g013640.1
NA
NA
Pdr9g013630.1
NA
NA
Pdr9g013620.1
NA
NA
Pdr9g013610.1
NA
NA
Pdr9g013600.1
NA
NA
Pdr9g013590.1
NA
NA
Pdr9g013580.1
NA
NA
Pdr9g013570.1
NA
MD05G1350900
Pdr9g013560.1
1e-143
MD05G1351200
NA
NA
MD05G1351300
NA
NA
MD05G1351400
NA
NA
NA
Pdr9g013550.1
NA
NA
Pdr9g013540.1
NA
NA
Pdr9g013530.1
NA
NA
Pdr9g013510.1
NA
NA
Pdr9g013500.1
NA
NA
Pdr9g013490.1
NA
NA
Pdr9g013480.1
NA
MD05G1351500
Pdr9g013470.1
0
MD05G1351600
NA
NA
MD05G1351900
NA
NA
MD05G1352000
NA
NA
MD05G1352100
NA
NA
MD05G1352200
NA
NA
NA
Pdr9g013450.1
NA
NA
Pdr9g013440.1
NA
NA
Pdr9g013430.1
NA
MD05G1352300
Pdr9g013420.1
1e-131
MD05G1352400
NA
NA
MD05G1352500
Pdr9g013410.1
1e-110
MD05G1352600
Pdr9g013400.1
1e-134
MD05G1352700
NA
NA
NA
Pdr9g013390.1
NA
MD05G1352800
Pdr9g013380.1
0
MD05G1352900
NA
NA
MD05G1353100
NA
NA
MD05G1353200
NA
NA
MD05G1353500
NA
NA
MD05G1353600
NA
NA
MD05G1353800
NA
NA
MD05G1353900
NA
NA
NA
Pdr9g013370.1
NA
NA
Pdr9g013360.1
NA
NA
Pdr9g013350.1
NA
NA
Pdr9g013340.1
NA
NA
Pdr9g013330.1
NA
NA
Pdr9g013320.1
NA
NA
Pdr9g013310.1
NA
NA
Pdr9g013300.1
NA
NA
Pdr9g013290.1
NA
NA
Pdr9g013280.1
NA
NA
Pdr9g013270.1
NA
NA
Pdr9g013250.1
NA
NA
Pdr9g013240.1
NA
NA
Pdr9g013230.1
NA
MD05G1354000
Pdr9g013220.1
0
MD05G1354100
NA
NA
MD05G1354200
Pdr9g013210.1
2e-98
MD05G1354300
NA
NA
MD05G1354400
NA
NA
MD05G1354500
NA
NA
MD05G1354600
NA
NA
MD05G1354700
NA
NA
MD05G1354800
NA
NA
MD05G1354900
NA
NA
MD05G1355000
NA
NA
MD05G1355100
NA
NA
MD05G1355200
NA
NA
MD05G1355300
NA
NA
MD05G1355400
NA
NA
MD05G1355500
NA
NA
MD05G1355700
NA
NA
MD05G1355800
NA
NA
MD05G1355900
NA
NA
MD05G1356000
NA
NA
MD05G1356100
NA
NA
MD05G1356200
NA
NA
MD05G1356400
NA
NA
NA
Pdr9g013200.1
NA
NA
Pdr9g013190.1
NA
NA
Pdr9g013180.1
NA
NA
Pdr9g013170.1
NA
NA
Pdr9g013160.1
NA
NA
Pdr9g013150.1
NA
NA
Pdr9g013140.1
NA
NA
Pdr9g013130.1
NA
MD05G1356500
Pdr9g013120.1
5e-52
MD05G1356600
NA
NA
NA
Pdr9g013110.1
NA
NA
Pdr9g013090.1
NA
NA
Pdr9g013080.1
NA
NA
Pdr9g013070.1
NA
NA
Pdr9g013060.1
NA
MD05G1356700
Pdr9g013040.1
3e-55
MD05G1356800
NA
NA
MD05G1356900
NA
NA
MD05G1357000
NA
NA
MD05G1357100
NA
NA
MD05G1357200
NA
NA
MD05G1357300
NA
NA
MD05G1357400
NA
NA
MD05G1357500
NA
NA
MD05G1357600
NA
NA
MD05G1357700
NA
NA
MD05G1357800
NA
NA
NA
Pdr9g013010.1
NA
NA
Pdr9g012990.1
NA
NA
Pdr9g012980.1
NA
NA
Pdr9g012970.1
NA
NA
Pdr9g012960.1
NA
NA
Pdr9g012950.1
NA
NA
Pdr9g012940.1
NA
NA
Pdr9g012930.1
NA
NA
Pdr9g012920.1
NA
NA
Pdr9g012910.2
NA
NA
Pdr9g012900.1
NA
NA
Pdr9g012890.1
NA
NA
Pdr9g012880.1
NA
NA
Pdr9g012870.1
NA
NA
Pdr9g012860.1
NA
NA
Pdr9g012850.1
NA
NA
Pdr9g012830.1
NA
NA
Pdr9g012810.1
NA
NA
Pdr9g012800.1
NA
NA
Pdr9g012790.1
NA
MD05G1357900
Pdr9g012780.1
2e-111
MD05G1358000
NA
NA
MD05G1358100
NA
NA
MD05G1358200
NA
NA
MD05G1358300
NA
NA
MD05G1358400
NA
NA
MD05G1358500
NA
NA
MD05G1358600
NA
NA
MD05G1358700
NA
NA
MD05G1358900
NA
NA
MD05G1359000
NA
NA
NA
Pdr9g012770.1
NA
NA
Pdr9g012760.1
NA
NA
Pdr9g012750.1
NA
NA
Pdr9g012740.1
NA
NA
Pdr9g012730.1
NA
NA
Pdr9g012720.1
NA
NA
Pdr9g012710.1
NA
NA
Pdr9g012700.1
NA
NA
Pdr9g012690.1
NA
NA
Pdr9g012680.1
NA
NA
Pdr9g012670.1
NA
NA
Pdr9g012660.1
NA
MD05G1359100
Pdr9g012650.1
2e-171
MD05G1359200
NA
NA
MD05G1359300
NA
NA
MD05G1359400
NA
NA
MD05G1359500
NA
NA
MD05G1359600
NA
NA
MD05G1359700
NA
NA
MD05G1359900
NA
NA
MD05G1360000
NA
NA
MD05G1360100
NA
NA
MD05G1360200
NA
NA
NA
Pdr9g012640.1
NA
NA
Pdr9g012630.1
NA
NA
Pdr9g012620.1
NA
NA
Pdr9g012610.1
NA
NA
Pdr9g012600.1
NA
MD05G1360300
Pdr9g012590.2
0