Cheddar

Germplasm Overview
NameCheddar
AliasN/A
GRIN IDPI 199100
TypeCultivar
SpeciesMalus x domestica
DescriptionN/A
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentRoter Astrachan
Paternal ParentAllington Pepping
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 17]
SSR Genotype DataN/A
SNP Genotype Data[view all 10295]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceHoward NP, Peace C, Silverstein KATS, Poets A, Luby JJ, Vanderzande S, Durel CE, Muranty H, Denancé C, and van de Weg E. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Accepted to Horticulture Research.
Publications
YearPublication
2021Howard, N.P., Peace, C., Silverstein, K.A.T. et al. The use of shared haplotype length information for pedigree reconstruction in asexually propagated outbreeding crops, demonstrated for apple and sweet cherry. Hortic Res 8, 202 (2021). https://doi.org/10.1038/s41438-021-00637-5
Snp Genotype Data
Total 10,295 records
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#DatasetMarker NameAlleleGenotype
1Apple_SNP_genotype_Howard_2021SNP_FB_0411238T/CA | A
2Apple_SNP_genotype_Howard_2021SNP_FB_0411240T/GA | B
3Apple_SNP_genotype_Howard_2021SNP_FB_0411246A/GB | B
4Apple_SNP_genotype_Howard_2021SNP_FB_1079904A/CB | B
5Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_TC_3094248_Lg1_02894_MAF50_285661_exon1T/CA | B
6Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_GA_3099492_Lg1_02894_MAF40_411283_exon1A/GA | B
7Apple_SNP_genotype_Howard_2021SNP_FB_0313817A/GA | A
8Apple_SNP_genotype_Howard_2021SNP_FB_1089803T/CA | A
9Apple_SNP_genotype_Howard_2021SNP_FB_1089798A/GA | B
10Apple_SNP_genotype_Howard_2021SNP_FB_0400909T/CB | B
11Apple_SNP_genotype_Howard_2021SNP_FB_0400916A/GB | B
12Apple_SNP_genotype_Howard_2021SNP_FB_0400919T/CA | B
13Apple_SNP_genotype_Howard_2021SNP_FB_0400922A/GB | B
14Apple_SNP_genotype_Howard_2021SNP_FB_0400921T/CB | B
15Apple_SNP_genotype_Howard_2021SNP_FB_1079977A/CB | B
16Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_AC_180528_Lg1_00288_MAF40_302606_exon1A/CA | B
17Apple_SNP_genotype_Howard_2021RosBREEDSNP_SNP_AC_121548_Lg1_00288_MAF30_MDP0000151845_exon1T/GA | B
18Apple_SNP_genotype_Howard_2021SNP_FB_0409694A/CB | B
19Apple_SNP_genotype_Howard_2021SNP_FB_0409675T/CA | B
20Apple_SNP_genotype_Howard_2021SNP_FB_0409674T/GB | B
21Apple_SNP_genotype_Howard_2021SNP_FB_0197405A/CA | B
22Apple_SNP_genotype_Howard_2021SNP_FB_0197414T/CA | B
23Apple_SNP_genotype_Howard_2021SNP_FB_0197767T/CB | B
24Apple_SNP_genotype_Howard_2021SNP_FB_0530079A/GA | B
25Apple_SNP_genotype_Howard_2021SNP_FB_0530074T/CB | B
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Cross References
External references for this accession
DatabaseAccession
GRINPI 199100
Phenotypic Data
Phenotypic Data
Total 17 trait scores
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# Dataset Descriptor Value
1APPLE.FIREBLIGHTFBSHNAT4
2APPLE.MORPHOLOGIC.97CALPERSIST1
3APPLE.MORPHOLOGIC.97CALYXBASIN1
4APPLE.MORPHOLOGIC.97ENDUSE2,8
5APPLE.MORPHOLOGIC.97FRTFLSHCOL2+2
6APPLE.MORPHOLOGIC.97FRTFLSHFLA3
7APPLE.MORPHOLOGIC.97FRTFLSHFRM2
8APPLE.MORPHOLOGIC.97FRTFLSHOXI3
9APPLE.MORPHOLOGIC.97FRTGRNDCOL3
10APPLE.MORPHOLOGIC.97FRTLENGTH65
11APPLE.MORPHOLOGIC.97FRTOVERCOL8
12APPLE.MORPHOLOGIC.97FRTSHPUNIF1
13APPLE.MORPHOLOGIC.97FRTSIZUNIF1
14APPLE.MORPHOLOGIC.97FRTSTEMLEN11
15APPLE.MORPHOLOGIC.97FRTSTEMTHK2
16APPLE.MORPHOLOGIC.97FRTTEXTURE2
17APPLE.MORPHOLOGIC.97FRTWEIGHT3
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