AMT2.1, JQ340497.1-AMT2.1.m1 (mRNA) Malus hupehensis

Transcript Overview
NameAMT2.1
Unique NameJQ340497.1-AMT2.1.m1
TypemRNA
OrganismMalus hupehensis ()
Sourcegenbank
Productammonium transporter AMT2;1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
JQ340497regionJQ340497:62..2339 +NCBI Rosaceae gene and mRNA sequencesn/a
chr12chromosomeAMT2.1:1..1473 .
chr12:24732899..24735197 -		n/a
chr12chromosomeAMT2.1:1..1473 .
chr12:29287428..29289726 -		n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JQ340497.1-AMT2.1.m1-cds1JQ340497.1-AMT2.1.m1-cds1Malus hupehensisCDS
JQ340497.1-AMT2.1.m1-cds2JQ340497.1-AMT2.1.m1-cds2Malus hupehensisCDS
JQ340497.1-AMT2.1.m1-cds3JQ340497.1-AMT2.1.m1-cds3Malus hupehensisCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
AMT2.1JQ340497.1-AMT2.1.p1Malus hupehensispolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI384237237
nuccoreJQ340497.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>JQ340497.1-AMT2.1.m1 ID=JQ340497.1-AMT2.1.m1; Name=AMT2.1; organism=Malus hupehensis; type=mRNA; length=1473bp
atggccggcattactaatgcttatagtgaaataaccccggcggttccgcc
gtggctaaacaaaggtgacaacgcatggcaactcacagcggccacttttg
tagggttacaaagcatgccgggcctagtgatcctctacgccagcatagtc
aagaagaaatgggcagtcaactcagccttcatggccctctacgccttcgc
cgccgtgctcatctgctgggtccttgtaggctaccgcatggccttcgggg
accagctcctgccattttgggctaagggtgcaccctctcttggtcaaaag
ttccttatcaaccgagccaaagtgccagaaagcactcactttcacgacgg
cggattgattgagaccccaacggttgagccattttaccccatggtatcgc
ttgtctacttccaattcacttttgcagccattactcttgttttgctagct
gggtctgttcttggccgcatgaacatcaaggcttggatggcttttgtccc
tctttggcttctattttcgtacactgttggagcctttagtctttggggtg
gcggcttcctttaccattggggtgtcattgactactccggcggctatgtc
atccatctctcctcaggcatagcaggtttcaccgccgcttattgggttgg
tccaaggttgaagagtgacagggaaaggtttccaccaaacaatgtgttgc
taatgctttgtggtgctgggatgctgtggatgggctggtcaggcttcaac
ggcggggctccttatgctgcaaacgttattgctccaatagcagtgttgaa
cacaaacatatgtgcagccacaagccttcttgtgtggacatctctggacg
tcgtgttcttcggcaagccgtcggtgatcggagctgttcagggcatgatg
acggggcttgtatgcatcacacctggggcggggttggtgcagtcgtgggc
ggctattctgatgggaatactttctggtagcattccatgggtctccatga
tggtcctacacaaaaagtctaccctattgcaaaaggtggatgacacccta
ggggtatttcacacacatgcagtggcagggcttctgggaggtctgctgac
tgggcttctggcggagccagcactttgcaggcttatactgccagtcggca
acagcagaggtgcattttacggtggcaatggagggatgcaatttctgaaa
caattggttggagctatgtttgtgattgcttggaacattgtctccaccac
tattatacttctggcaattagggttttcatacctctgagaatgccggagg
agcagcttaatatcggagatgacgcggttcacggagaggaggcttacgct
ctttggggtgatggagaaaaatatgatccaacaagacatggtcggaatac
agcagtgtacggcgaagaaatggcaccgtcgccgtatgtcaatggtgcaa
gaggtgtgaccattaacttgtaa
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protein sequence of AMT2.1

>JQ340497.1-AMT2.1.p1 ID=JQ340497.1-AMT2.1.p1; Name=AMT2.1; organism=Malus hupehensis; type=polypeptide; length=490bp
MAGITNAYSEITPAVPPWLNKGDNAWQLTAATFVGLQSMPGLVILYASIV
KKKWAVNSAFMALYAFAAVLICWVLVGYRMAFGDQLLPFWAKGAPSLGQK
FLINRAKVPESTHFHDGGLIETPTVEPFYPMVSLVYFQFTFAAITLVLLA
GSVLGRMNIKAWMAFVPLWLLFSYTVGAFSLWGGGFLYHWGVIDYSGGYV
IHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLCGAGMLWMGWSGFN
GGAPYAANVIAPIAVLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMM
TGLVCITPGAGLVQSWAAILMGILSGSIPWVSMMVLHKKSTLLQKVDDTL
GVFHTHAVAGLLGGLLTGLLAEPALCRLILPVGNSRGAFYGGNGGMQFLK
QLVGAMFVIAWNIVSTTIILLAIRVFIPLRMPEEQLNIGDDAVHGEEAYA
LWGDGEKYDPTRHGRNTAVYGEEMAPSPYVNGARGVTINL
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mRNA from alignment at JQ340497:62..2339+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JQ340497.1-AMT2.1.m1 ID=JQ340497.1-AMT2.1.m1; Name=AMT2.1; organism=Malus hupehensis; type=mRNA; length=2278bp; location=Sequence derived from: JQ340497:62..2339+ (Malus hupehensis
atggccggcattactaatgcttatagtgaaataaccccggcggttccgcc
gtggctaaacaaaggtgacaacgcatggcaactcacagcggccacttttg
tagggttacaaagcatgccgggcctagtgatcctctacgccagcatagtc
aagaagaaatgggcagtcaactcagccttcatggccctctacgccttcgc
cgccgtgctcatctgctgggtccttgtaggctaccgcatggccttcgggg
accagctcctgccattttgggctaagggtgcaccctctcttggtcaaaag
ttccttatcaaccgagccaaagtgccagaaagcactcactttcacgacgg
cggattgattgagaccccaacggttgagccattttaccccatggtatcgc
ttgtctacttccaattcacttttgcagccattactcttgttttgctagct
gggtctgttcttggccgcatgaacatcaaggcttggatggcttttgtccc
tctttggcttctattttcgtacactgttggagcctttagtctttggggtg
gcggcttcctttaccattggggtgtcattgactactccggcggctatgtc
atccatctctcctcaggcatagcaggtttcaccgccgcttattgggtagg
tacttatgattaaatcgtgagtctgttttagaatttagactaatttaaag
ttttgcacatgttgtaataccatgtttacttatgtgttctaggttggtcc
aaggttgaagagtgacagggaaaggtttccaccaaacaatgtgttgctaa
tgctttgtggtgctgggatgctgtggatgggctggtcaggcttcaacggc
ggggctccttatgctgcaaacgttattgctccaatagcagtgttgaacac
aaacatatgtgcagccacaagccttcttgtgtggacatctctggacgtcg
tgttcttcggcaagccgtcggtgatcggagctgttcagggcatgatgacg
gggcttgtatgcatcacacctggggcggggttggtgcagtcgtgggcggc
tattctgatgggaatactttctggtagcattccatgggtctccatgatgg
tcctacacaaaaagtctaccctattgcaaaaggtaagagtttctgctttc
cacactgtctttttgtttctacaattttttggtactgttttttggcatat
gatacgctttctgtattttctaatcatgtcgttaaaaatttagacgttct
aatcttaagatatttttttgcgttctaatcttacaaagagaaataactta
tgcttcttcgatacatgaaataaagaatcttaagtaggtttaagtctcca
tcaaacattttaatttgtttatatttaggctttcatctcttttcctttgt
tttttaaatattcatctagcttacagtattccaagatttctaccttatag
tcccaacaaaaatcacatccatcattttccgctgtactagtaatattata
ttcgttcccgttatcctttaaatatgtacctccatcaactgtaaattgac
cacaatgaagattaggttttctagaagatttccattagtcctctatcctc
tttccttaatgcttgaccaatcatcaatgaacaaaatatcataaatgaaa
tgaaaggaatagaaggagaaaaaactaaaactaacattacaaatccgagt
taggtcggttaaaatagtgtgttcgcttgttgcacctaatttcaatttat
ctttttaaattagaacaacgtagattatcgccttatggtcacataaatta
aattaaattcttaccatatacaatatttgattatttacaggtggatgaca
ccctaggggtatttcacacacatgcagtggcagggcttctgggaggtctg
ctgactgggcttctggcggagccagcactttgcaggcttatactgccagt
cggcaacagcagaggtgcattttacggtggcaatggagggatgcaatttc
tgaaacaattggttggagctatgtttgtgattgcttggaacattgtctcc
accactattatacttctggcaattagggttttcatacctctgagaatgcc
ggaggagcagcttaatatcggagatgacgcggttcacggagaggaggctt
acgctctttggggtgatggagaaaaatatgatccaacaagacatggtcgg
aatacagcagtgtacggcgaagaaatggcaccgtcgccgtatgtcaatgg
tgcaagaggtgtgaccattaacttgtaa
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Coding sequence (CDS) from alignment at JQ340497:62..2339+

>JQ340497.1-AMT2.1.m1 ID=JQ340497.1-AMT2.1.m1; Name=AMT2.1; organism=Malus hupehensis; type=CDS; length=1473bp; location=Sequence derived from: JQ340497:62..2339+ (Malus hupehensis
atggccggcattactaatgcttatagtgaaataaccccggcggttccgcc
gtggctaaacaaaggtgacaacgcatggcaactcacagcggccacttttg
tagggttacaaagcatgccgggcctagtgatcctctacgccagcatagtc
aagaagaaatgggcagtcaactcagccttcatggccctctacgccttcgc
cgccgtgctcatctgctgggtccttgtaggctaccgcatggccttcgggg
accagctcctgccattttgggctaagggtgcaccctctcttggtcaaaag
ttccttatcaaccgagccaaagtgccagaaagcactcactttcacgacgg
cggattgattgagaccccaacggttgagccattttaccccatggtatcgc
ttgtctacttccaattcacttttgcagccattactcttgttttgctagct
gggtctgttcttggccgcatgaacatcaaggcttggatggcttttgtccc
tctttggcttctattttcgtacactgttggagcctttagtctttggggtg
gcggcttcctttaccattggggtgtcattgactactccggcggctatgtc
atccatctctcctcaggcatagcaggtttcaccgccgcttattgggttgg
tccaaggttgaagagtgacagggaaaggtttccaccaaacaatgtgttgc
taatgctttgtggtgctgggatgctgtggatgggctggtcaggcttcaac
ggcggggctccttatgctgcaaacgttattgctccaatagcagtgttgaa
cacaaacatatgtgcagccacaagccttcttgtgtggacatctctggacg
tcgtgttcttcggcaagccgtcggtgatcggagctgttcagggcatgatg
acggggcttgtatgcatcacacctggggcggggttggtgcagtcgtgggc
ggctattctgatgggaatactttctggtagcattccatgggtctccatga
tggtcctacacaaaaagtctaccctattgcaaaaggtggatgacacccta
ggggtatttcacacacatgcagtggcagggcttctgggaggtctgctgac
tgggcttctggcggagccagcactttgcaggcttatactgccagtcggca
acagcagaggtgcattttacggtggcaatggagggatgcaatttctgaaa
caattggttggagctatgtttgtgattgcttggaacattgtctccaccac
tattatacttctggcaattagggttttcatacctctgagaatgccggagg
agcagcttaatatcggagatgacgcggttcacggagaggaggcttacgct
ctttggggtgatggagaaaaatatgatccaacaagacatggtcggaatac
agcagtgtacggcgaagaaatggcaccgtcgccgtatgtcaatggtgcaa
gaggtgtgaccattaacttgtaa
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