MADS13-1, AB504716.1-MADS13-1.m1 (mRNA) Pyrus pyrifolia var. culta

Transcript Overview
NameMADS13-1
Unique NameAB504716.1-MADS13-1.m1
TypemRNA
OrganismPyrus pyrifolia var. culta ()
Sourcegenbank
Productdormancy-associated MADS-box transcription factor
Genbank NoteDAM
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AB504716regionAB504716:145..828 +NCBI Rosaceae gene and mRNA sequencesn/a
scaffold00290supercontigMADS13-1:1..675 .
scaffold00290:131477..144638 +		n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AB504716.1-MADS13-1.m1-cds1AB504716.1-MADS13-1.m1-cds1Pyrus pyrifolia var. cultaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MADS13-1AB504716.1-MADS13-1.p1Pyrus pyrifolia var. cultapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI262263147
nuccoreAB504716.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>AB504716.1-MADS13-1.m1 ID=AB504716.1-MADS13-1.m1; Name=MADS13-1; organism=Pyrus pyrifolia var. culta; type=mRNA; length=684bp
atgaagatcaagatcagaaagatcgactacttgccggcaaggcaggtgac
cttctcaaagaggagaagggggattttcaagaaagctggagagctgtcga
ttctgtgtgaatctgaagttgctgttatcatcttttctcaaactggcaag
ctctttgatttctcaagctccagcaccaaggatgtgattgcaaggtacaa
ttcacatgtcggtggggaaaaatcggatcaacccacgcttcatcagctac
tgttggagaaagaaaacaatatcaggctgagtaaggaactcgaggataag
agttgcaagctgaggcagatgaagggtgtggacctcgaagacttggatct
gggtgaactacagaagttagaaaaattggtggaagcaagccttggccgtg
tgattcaaactaaggaagaaaagattacgagtgaggttatggcacttgag
aaaaagggagctgagctgatagaagctaacaaccagctaagccagaagat
ggtgatgttacccggaggagatagcggaccggaggccatcctggagttgg
aaaacctgaataatattggagaaggaagcgtgacatctgaatcagccaca
aatgtcaccaccttctccaacagttctctttcccttgaagatgactgctc
cgacaccttgtctctcaaactggggcttccgtag
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protein sequence of MADS13-1

>AB504716.1-MADS13-1.p1 ID=AB504716.1-MADS13-1.p1; Name=MADS13-1; organism=Pyrus pyrifolia var. culta; type=polypeptide; length=227bp
MKIKIRKIDYLPARQVTFSKRRRGIFKKAGELSILCESEVAVIIFSQTGK
LFDFSSSSTKDVIARYNSHVGGEKSDQPTLHQLLLEKENNIRLSKELEDK
SCKLRQMKGVDLEDLDLGELQKLEKLVEASLGRVIQTKEEKITSEVMALE
KKGAELIEANNQLSQKMVMLPGGDSGPEAILELENLNNIGEGSVTSESAT
NVTTFSNSSLSLEDDCSDTLSLKLGLP
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mRNA from alignment at AB504716:145..828+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AB504716.1-MADS13-1.m1 ID=AB504716.1-MADS13-1.m1; Name=MADS13-1; organism=Pyrus pyrifolia var. culta; type=mRNA; length=684bp; location=Sequence derived from: AB504716:145..828+ (Pyrus pyrifolia var. culta
atgaagatcaagatcagaaagatcgactacttgccggcaaggcaggtgac
cttctcaaagaggagaagggggattttcaagaaagctggagagctgtcga
ttctgtgtgaatctgaagttgctgttatcatcttttctcaaactggcaag
ctctttgatttctcaagctccagcaccaaggatgtgattgcaaggtacaa
ttcacatgtcggtggggaaaaatcggatcaacccacgcttcatcagctac
tgttggagaaagaaaacaatatcaggctgagtaaggaactcgaggataag
agttgcaagctgaggcagatgaagggtgtggacctcgaagacttggatct
gggtgaactacagaagttagaaaaattggtggaagcaagccttggccgtg
tgattcaaactaaggaagaaaagattacgagtgaggttatggcacttgag
aaaaagggagctgagctgatagaagctaacaaccagctaagccagaagat
ggtgatgttacccggaggagatagcggaccggaggccatcctggagttgg
aaaacctgaataatattggagaaggaagcgtgacatctgaatcagccaca
aatgtcaccaccttctccaacagttctctttcccttgaagatgactgctc
cgacaccttgtctctcaaactggggcttccgtag
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Coding sequence (CDS) from alignment at AB504716:145..828+

>AB504716.1-MADS13-1.m1 ID=AB504716.1-MADS13-1.m1; Name=MADS13-1; organism=Pyrus pyrifolia var. culta; type=CDS; length=684bp; location=Sequence derived from: AB504716:145..828+ (Pyrus pyrifolia var. culta
atgaagatcaagatcagaaagatcgactacttgccggcaaggcaggtgac
cttctcaaagaggagaagggggattttcaagaaagctggagagctgtcga
ttctgtgtgaatctgaagttgctgttatcatcttttctcaaactggcaag
ctctttgatttctcaagctccagcaccaaggatgtgattgcaaggtacaa
ttcacatgtcggtggggaaaaatcggatcaacccacgcttcatcagctac
tgttggagaaagaaaacaatatcaggctgagtaaggaactcgaggataag
agttgcaagctgaggcagatgaagggtgtggacctcgaagacttggatct
gggtgaactacagaagttagaaaaattggtggaagcaagccttggccgtg
tgattcaaactaaggaagaaaagattacgagtgaggttatggcacttgag
aaaaagggagctgagctgatagaagctaacaaccagctaagccagaagat
ggtgatgttacccggaggagatagcggaccggaggccatcctggagttgg
aaaacctgaataatattggagaaggaagcgtgacatctgaatcagccaca
aatgtcaccaccttctccaacagttctctttcccttgaagatgactgctc
cgacaccttgtctctcaaactggggcttccgtag
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