SERK1, HM802242.1-SERK1.m1 (mRNA) Rosa canina

Transcript Overview


Name	SERK1
Unique Name	HM802242.1-SERK1.m1
Type	mRNA
Organism	Rosa canina ()
Source	genbank
Product	somatic embryogenesis receptor-like kinase

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
HM802242	region	HM802242:302..2182 +	NCBI Rosaceae gene and mRNA sequences	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM802242.1-SERK1.m1-cds1	HM802242.1-SERK1.m1-cds1	Rosa canina	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
SERK1	HM802242.1-SERK1.p1	Rosa canina	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	306489670
nuccore	HM802242.1

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM802242:302..2182+
coding sequence from alignment at HM802242:302..2182+

mRNA sequence

>HM802242.1-SERK1.m1 ID=HM802242.1-SERK1.m1; Name=SERK1; organism=Rosa canina; type=mRNA; length=1881bp
atggatagcaggcttgccagttcactttgtcccttgttgatcctcgtcgc
tcatcccttatggatcataatggtgctttcaaatatggaaggtgatgcct
tgcatagtctaagggccaacttagaggacccgaacaatgtcttgcagagt
tgggatccaactcttgttaacccgtgtacatggtttcatgtaacatgcaa
caatgagaatagcgttattagagttgatcttggaaatgcagccttgtctg
gtcaacttgttccctcgcttggccttcttaagaatttacaatatttggag
ctctacagtaataacataacgggaccaattcctagtgaacttgggaatct
aaccagcttggtgagcttggatctttatttgaatagttttactggtcaaa
tcccagataccttgggcaagctgtcaaaactgcgattcctccggctcaac
aacaacagcttggtgggtgccattcctatgtcattgactaatatctcctc
tcttcaagtattggatctatcaaataaccacctctcaggagaagttccag
acaatggctccttctctttattcactcccataagttttgccaacaacctg
aatctatgtggcccagtaacaggacgtccttgcccaggatctcctccatt
ttcacctcccccaccttttgttccaccaccccccatttcaacaccagggg
gaaatagtgccacgggggctattgctggtggagttgctgctggtgctgct
ttactatttgctgcccctgcaattgcatttgcatggtggcgccgcagaaa
acctcaagaatttttctttgatgtacctgcggaggaggatcctgaagtac
atctggggcagcttaagaggttttctttgcgagaattacaagttgcaaca
gatagtttcagcaacaaaaacattctggggagaggtggatttggtaaggt
ctataaagggcgcctggcagacggttctctggttgctgtgaaaagactga
aagaagagcgcacacctggtggcgagttgcagtttcaaaccgaagtagag
atgataagcatggccgtgcatcgaaatcttcttcggttacgtgggttttg
tatgacaccaactgagcggttacttgtttatccttatatggctaatggca
gcgttgcctcatgtttaagagaacgcccaccatcccaaccacctcttgat
tggccaactcggaagcgaattgcattgggatctgcgaggggcctttctta
tttgcacgatcactgtgacccaaagattattcaccgtgatgtgaaagctg
caaacattttgctggatgaggagtttgaggctgttgttggagactttggg
ttggctaaacttatggactataaagacacccacgtaactactgcagtacg
tggaacaattggacatatagctccagagtacctctccactgggaaatctt
ctgagaaaactgacgtgttcggttatggtatcatgcttttggaacttatc
actggtcagagggccttcgatcttgctcggcttgcaaatgatgatgatgt
catgttgcttgattgggtaaaaggactgctgaaagagaaaaagctagaaa
tgcttgttgatcctgatctgcaaagaaattatgtagatgctgaagtagag
caacttattcaagttgcactgctctgcacacaaggctcgccaatggaaag
gccgaagatgtcagaagtggtgagaatgcttgaaggtgatggcttggcag
aaagatgggatgagtggcaaaaggtcaaagtactccgccaggaagtggaa
ttagctcctcatccgaattctgattggattgttgactcaactgaaaattt
gcatgcggttgagttatctggtccaaggtga

protein sequence of SERK1

>HM802242.1-SERK1.p1 ID=HM802242.1-SERK1.p1; Name=SERK1; organism=Rosa canina; type=polypeptide; length=626bp
MDSRLASSLCPLLILVAHPLWIIMVLSNMEGDALHSLRANLEDPNNVLQS
WDPTLVNPCTWFHVTCNNENSVIRVDLGNAALSGQLVPSLGLLKNLQYLE
LYSNNITGPIPSELGNLTSLVSLDLYLNSFTGQIPDTLGKLSKLRFLRLN
NNSLVGAIPMSLTNISSLQVLDLSNNHLSGEVPDNGSFSLFTPISFANNL
NLCGPVTGRPCPGSPPFSPPPPFVPPPPISTPGGNSATGAIAGGVAAGAA
LLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVAT
DSFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVE
MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLD
WPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG
LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELI
TGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQRNYVDAEVE
QLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWDEWQKVKVLRQEVE
LAPHPNSDWIVDSTENLHAVELSGPR

mRNA from alignment at HM802242:302..2182+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM802242.1-SERK1.m1 ID=HM802242.1-SERK1.m1; Name=SERK1; organism=Rosa canina; type=mRNA; length=1881bp; location=Sequence derived from: HM802242:302..2182+ (Rosa canina
atggatagcaggcttgccagttcactttgtcccttgttgatcctcgtcgc
tcatcccttatggatcataatggtgctttcaaatatggaaggtgatgcct
tgcatagtctaagggccaacttagaggacccgaacaatgtcttgcagagt
tgggatccaactcttgttaacccgtgtacatggtttcatgtaacatgcaa
caatgagaatagcgttattagagttgatcttggaaatgcagccttgtctg
gtcaacttgttccctcgcttggccttcttaagaatttacaatatttggag
ctctacagtaataacataacgggaccaattcctagtgaacttgggaatct
aaccagcttggtgagcttggatctttatttgaatagttttactggtcaaa
tcccagataccttgggcaagctgtcaaaactgcgattcctccggctcaac
aacaacagcttggtgggtgccattcctatgtcattgactaatatctcctc
tcttcaagtattggatctatcaaataaccacctctcaggagaagttccag
acaatggctccttctctttattcactcccataagttttgccaacaacctg
aatctatgtggcccagtaacaggacgtccttgcccaggatctcctccatt
ttcacctcccccaccttttgttccaccaccccccatttcaacaccagggg
gaaatagtgccacgggggctattgctggtggagttgctgctggtgctgct
ttactatttgctgcccctgcaattgcatttgcatggtggcgccgcagaaa
acctcaagaatttttctttgatgtacctgcggaggaggatcctgaagtac
atctggggcagcttaagaggttttctttgcgagaattacaagttgcaaca
gatagtttcagcaacaaaaacattctggggagaggtggatttggtaaggt
ctataaagggcgcctggcagacggttctctggttgctgtgaaaagactga
aagaagagcgcacacctggtggcgagttgcagtttcaaaccgaagtagag
atgataagcatggccgtgcatcgaaatcttcttcggttacgtgggttttg
tatgacaccaactgagcggttacttgtttatccttatatggctaatggca
gcgttgcctcatgtttaagagaacgcccaccatcccaaccacctcttgat
tggccaactcggaagcgaattgcattgggatctgcgaggggcctttctta
tttgcacgatcactgtgacccaaagattattcaccgtgatgtgaaagctg
caaacattttgctggatgaggagtttgaggctgttgttggagactttggg
ttggctaaacttatggactataaagacacccacgtaactactgcagtacg
tggaacaattggacatatagctccagagtacctctccactgggaaatctt
ctgagaaaactgacgtgttcggttatggtatcatgcttttggaacttatc
actggtcagagggccttcgatcttgctcggcttgcaaatgatgatgatgt
catgttgcttgattgggtaaaaggactgctgaaagagaaaaagctagaaa
tgcttgttgatcctgatctgcaaagaaattatgtagatgctgaagtagag
caacttattcaagttgcactgctctgcacacaaggctcgccaatggaaag
gccgaagatgtcagaagtggtgagaatgcttgaaggtgatggcttggcag
aaagatgggatgagtggcaaaaggtcaaagtactccgccaggaagtggaa
ttagctcctcatccgaattctgattggattgttgactcaactgaaaattt
gcatgcggttgagttatctggtccaaggtga

Coding sequence (CDS) from alignment at HM802242:302..2182+

>HM802242.1-SERK1.m1 ID=HM802242.1-SERK1.m1; Name=SERK1; organism=Rosa canina; type=CDS; length=1881bp; location=Sequence derived from: HM802242:302..2182+ (Rosa canina
atggatagcaggcttgccagttcactttgtcccttgttgatcctcgtcgc
tcatcccttatggatcataatggtgctttcaaatatggaaggtgatgcct
tgcatagtctaagggccaacttagaggacccgaacaatgtcttgcagagt
tgggatccaactcttgttaacccgtgtacatggtttcatgtaacatgcaa
caatgagaatagcgttattagagttgatcttggaaatgcagccttgtctg
gtcaacttgttccctcgcttggccttcttaagaatttacaatatttggag
ctctacagtaataacataacgggaccaattcctagtgaacttgggaatct
aaccagcttggtgagcttggatctttatttgaatagttttactggtcaaa
tcccagataccttgggcaagctgtcaaaactgcgattcctccggctcaac
aacaacagcttggtgggtgccattcctatgtcattgactaatatctcctc
tcttcaagtattggatctatcaaataaccacctctcaggagaagttccag
acaatggctccttctctttattcactcccataagttttgccaacaacctg
aatctatgtggcccagtaacaggacgtccttgcccaggatctcctccatt
ttcacctcccccaccttttgttccaccaccccccatttcaacaccagggg
gaaatagtgccacgggggctattgctggtggagttgctgctggtgctgct
ttactatttgctgcccctgcaattgcatttgcatggtggcgccgcagaaa
acctcaagaatttttctttgatgtacctgcggaggaggatcctgaagtac
atctggggcagcttaagaggttttctttgcgagaattacaagttgcaaca
gatagtttcagcaacaaaaacattctggggagaggtggatttggtaaggt
ctataaagggcgcctggcagacggttctctggttgctgtgaaaagactga
aagaagagcgcacacctggtggcgagttgcagtttcaaaccgaagtagag
atgataagcatggccgtgcatcgaaatcttcttcggttacgtgggttttg
tatgacaccaactgagcggttacttgtttatccttatatggctaatggca
gcgttgcctcatgtttaagagaacgcccaccatcccaaccacctcttgat
tggccaactcggaagcgaattgcattgggatctgcgaggggcctttctta
tttgcacgatcactgtgacccaaagattattcaccgtgatgtgaaagctg
caaacattttgctggatgaggagtttgaggctgttgttggagactttggg
ttggctaaacttatggactataaagacacccacgtaactactgcagtacg
tggaacaattggacatatagctccagagtacctctccactgggaaatctt
ctgagaaaactgacgtgttcggttatggtatcatgcttttggaacttatc
actggtcagagggccttcgatcttgctcggcttgcaaatgatgatgatgt
catgttgcttgattgggtaaaaggactgctgaaagagaaaaagctagaaa
tgcttgttgatcctgatctgcaaagaaattatgtagatgctgaagtagag
caacttattcaagttgcactgctctgcacacaaggctcgccaatggaaag
gccgaagatgtcagaagtggtgagaatgcttgaaggtgatggcttggcag
aaagatgggatgagtggcaaaaggtcaaagtactccgccaggaagtggaa
ttagctcctcatccgaattctgattggattgttgactcaactgaaaattt
gcatgcggttgagttatctggtccaaggtga