PGIP, AF196884.1-PGIP.m1 (mRNA) Potentilla indica

Transcript Overview
NamePGIP
Unique NameAF196884.1-PGIP.m1
TypemRNA
OrganismPotentilla indica ()
Sourcegenbank
Productpolygalacturonase inhibitor protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AF196884regionAF196884:1..843 +NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PGIPAF196884.1-PGIPPotentilla indicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AF196884.1-PGIP.m1-cds1AF196884.1-PGIP.m1-cds1Potentilla indicaCDS
AF196884.1-PGIP.m1-cds2AF196884.1-PGIP.m1-cds2Potentilla indicaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PGIPAF196884.1-PGIP.p1Potentilla indicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI13873158
nuccoreAF196884.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>AF196884.1-PGIP.m1 ID=AF196884.1-PGIP.m1; Name=PGIP; organism=Potentilla indica; type=mRNA; length=757bp
tcatggaaacccgaagtcgactgttgtactacatggaacagcgtcgaatg
tgatcccatcaccaaccgtatcacctccctctctatcttatcctatgatc
aagtctccggccatattcctccccaagttggcgacttgccgtaccttgaa
tatctcacgattcgcaagcaaccaaatgtaaccggtcctatccaacccgc
cattgccaagctcaaaaatctcaaatggcttaggctcgggtggaacaacc
tctcaggctcagtccctgatttcctcagccagctcaagaacctgactttc
attgaactcaactacaacaacctcacaggctccatccccagctcgctttc
tctgccaccaaatttggcctctcttcgtctagaccgtaacaagctcacag
gtaaaattcagagctcattcggaagattcgttggtgtccttccagatctc
tacctctcccacaaccagctcacaggcaagatcccaaccactttaggcaa
catggacttccgcgccatagacctgtcacgtaacatgctcgaaggcgacg
cgtcgttccttttcgggttgaacaagacgacgcagattgcagatttgtcc
aggaacgtgctggaatttgatctgtcaaaggcgaagtttaccaagagcct
gatttcactagacttgaatcataacaggctcacagggagtattccagagc
agttgactgaggttaagttgcagttcttcaatgtgagctacaacaggctg
tgtggta
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protein sequence of PGIP

>AF196884.1-PGIP.p1 ID=AF196884.1-PGIP.p1; Name=PGIP; organism=Potentilla indica; type=polypeptide; length=252bp
SWKPEVDCCTTWNSVECDPITNRITSLSILSYDQVSGHIPPQVGDLPYLE
YLTIRKQPNVTGPIQPAIAKLKNLKWLRLGWNNLSGSVPDFLSQLKNLTF
IELNYNNLTGSIPSSLSLPPNLASLRLDRNKLTGKIQSSFGRFVGVLPDL
YLSHNQLTGKIPTTLGNMDFRAIDLSRNMLEGDASFLFGLNKTTQIADLS
RNVLEFDLSKAKFTKSLISLDLNHNRLTGSIPEQLTEVKLQFFNVSYNRL
CG
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mRNA from alignment at AF196884:1..843+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AF196884.1-PGIP.m1 ID=AF196884.1-PGIP.m1; Name=PGIP; organism=Potentilla indica; type=mRNA; length=843bp; location=Sequence derived from: AF196884:1..843+ (Potentilla indica
tcatggaaacccgaagtcgactgttgtactacatggaacagcgtcgaatg
tgatcccatcaccaaccgtatcacctccctctctatcttatcctatgatc
aagtctccggccatattcctccccaagttggcgacttgccgtaccttgaa
tatctcacgattcgcaagcaaccaaatgtaaccggtcctatccaacccgc
cattgccaagctcaaaaatctcaaatggcttaggctcgggtggaacaacc
tctcaggctcagtccctgatttcctcagccagctcaagaacctgactttc
attgaactcaactacaacaacctcacaggctccatccccagctcgctttc
tctgccaccaaatttggcctctcttcgtctagaccgtaacaagctcacag
gtatataaggaaacgaaacttaacactactcttgaaacaacatttcttct
gttaatgtgtatgtttaataccttgctcaatcacaggtaaaattcagagc
tcattcggaagattcgttggtgtccttccagatctctacctctcccacaa
ccagctcacaggcaagatcccaaccactttaggcaacatggacttccgcg
ccatagacctgtcacgtaacatgctcgaaggcgacgcgtcgttccttttc
gggttgaacaagacgacgcagattgcagatttgtccaggaacgtgctgga
atttgatctgtcaaaggcgaagtttaccaagagcctgatttcactagact
tgaatcataacaggctcacagggagtattccagagcagttgactgaggtt
aagttgcagttcttcaatgtgagctacaacaggctgtgtggta
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Coding sequence (CDS) from alignment at AF196884:1..843+

>AF196884.1-PGIP.m1 ID=AF196884.1-PGIP.m1; Name=PGIP; organism=Potentilla indica; type=CDS; length=757bp; location=Sequence derived from: AF196884:1..843+ (Potentilla indica
tcatggaaacccgaagtcgactgttgtactacatggaacagcgtcgaatg
tgatcccatcaccaaccgtatcacctccctctctatcttatcctatgatc
aagtctccggccatattcctccccaagttggcgacttgccgtaccttgaa
tatctcacgattcgcaagcaaccaaatgtaaccggtcctatccaacccgc
cattgccaagctcaaaaatctcaaatggcttaggctcgggtggaacaacc
tctcaggctcagtccctgatttcctcagccagctcaagaacctgactttc
attgaactcaactacaacaacctcacaggctccatccccagctcgctttc
tctgccaccaaatttggcctctcttcgtctagaccgtaacaagctcacag
gtaaaattcagagctcattcggaagattcgttggtgtccttccagatctc
tacctctcccacaaccagctcacaggcaagatcccaaccactttaggcaa
catggacttccgcgccatagacctgtcacgtaacatgctcgaaggcgacg
cgtcgttccttttcgggttgaacaagacgacgcagattgcagatttgtcc
aggaacgtgctggaatttgatctgtcaaaggcgaagtttaccaagagcct
gatttcactagacttgaatcataacaggctcacagggagtattccagagc
agttgactgaggttaagttgcagttcttcaatgtgagctacaacaggctg
tgtggta
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