PGIP, AF196872.1-PGIP.m1 (mRNA) Chamaebatia foliolosa

Transcript Overview
NamePGIP
Unique NameAF196872.1-PGIP.m1
TypemRNA
OrganismChamaebatia foliolosa ()
Sourcegenbank
Productpolygalacturonase inhibitor protein
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
AF196872regionAF196872:1..754 +NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PGIPAF196872.1-PGIPChamaebatia foliolosagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
AF196872.1-PGIP.m1-cds1AF196872.1-PGIP.m1-cds1Chamaebatia foliolosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
PGIPAF196872.1-PGIP.p1Chamaebatia foliolosapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI13873134
nuccoreAF196872.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>AF196872.1-PGIP.m1 ID=AF196872.1-PGIP.m1; Name=PGIP; organism=Chamaebatia foliolosa; type=mRNA; length=754bp
tcatggaacccagaccatgattgctgtgaatggtactgcgtcacctgtga
ccccaccacaaaccgcatcaactccctcaccatcttttccggccagctct
ctggccaaatccctgcccaggtcggcgacttaccttatcttcaaactctg
gagttccacaagctatccaacctctctggcccaatccaaccctccattgc
aaagctcaaaagcctcacgttcctccgcctcagcaataccaacatctcag
gctctgtccctaacttcctcagccacctgaagaacctcactttcctcgac
ctttccttcaacaacctcacaggctccatccccagctcgctttctcagct
accaaacttgaacgcccttcacctagaccgtaacaagctcacaggtcata
tcccatactcatttggacaattccagggcaacattccagatttatacctc
tcccacaaccagctctcaggcaaaataccaacctcatttgccacaatgga
cttcaaccgcattgacttatcacggaacaagcttgaaggcgacgcatctg
tgatatttggagagaacaagacaacgcagattgtggacctgtcgaggaac
ttgctagaatttaatctgtcagaggtgaagtttcccacgagcttgacttc
gctggacattaaccataacagcatcaaagggagtattccggtgcagatga
cccaactgccggacttgcagttcctgaatgtgagctacaacaggctgtgt
ggta
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protein sequence of PGIP

>AF196872.1-PGIP.p1 ID=AF196872.1-PGIP.p1; Name=PGIP; organism=Chamaebatia foliolosa; type=polypeptide; length=251bp
SWNPDHDCCEWYCVTCDPTTNRINSLTIFSGQLSGQIPAQVGDLPYLQTL
EFHKLSNLSGPIQPSIAKLKSLTFLRLSNTNISGSVPNFLSHLKNLTFLD
LSFNNLTGSIPSSLSQLPNLNALHLDRNKLTGHIPYSFGQFQGNIPDLYL
SHNQLSGKIPTSFATMDFNRIDLSRNKLEGDASVIFGENKTTQIVDLSRN
LLEFNLSEVKFPTSLTSLDINHNSIKGSIPVQMTQLPDLQFLNVSYNRLC
G
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mRNA from alignment at AF196872:1..754+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>AF196872.1-PGIP.m1 ID=AF196872.1-PGIP.m1; Name=PGIP; organism=Chamaebatia foliolosa; type=mRNA; length=754bp; location=Sequence derived from: AF196872:1..754+ (Chamaebatia foliolosa
tcatggaacccagaccatgattgctgtgaatggtactgcgtcacctgtga
ccccaccacaaaccgcatcaactccctcaccatcttttccggccagctct
ctggccaaatccctgcccaggtcggcgacttaccttatcttcaaactctg
gagttccacaagctatccaacctctctggcccaatccaaccctccattgc
aaagctcaaaagcctcacgttcctccgcctcagcaataccaacatctcag
gctctgtccctaacttcctcagccacctgaagaacctcactttcctcgac
ctttccttcaacaacctcacaggctccatccccagctcgctttctcagct
accaaacttgaacgcccttcacctagaccgtaacaagctcacaggtcata
tcccatactcatttggacaattccagggcaacattccagatttatacctc
tcccacaaccagctctcaggcaaaataccaacctcatttgccacaatgga
cttcaaccgcattgacttatcacggaacaagcttgaaggcgacgcatctg
tgatatttggagagaacaagacaacgcagattgtggacctgtcgaggaac
ttgctagaatttaatctgtcagaggtgaagtttcccacgagcttgacttc
gctggacattaaccataacagcatcaaagggagtattccggtgcagatga
cccaactgccggacttgcagttcctgaatgtgagctacaacaggctgtgt
ggta
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Coding sequence (CDS) from alignment at AF196872:1..754+

>AF196872.1-PGIP.m1 ID=AF196872.1-PGIP.m1; Name=PGIP; organism=Chamaebatia foliolosa; type=CDS; length=754bp; location=Sequence derived from: AF196872:1..754+ (Chamaebatia foliolosa
tcatggaacccagaccatgattgctgtgaatggtactgcgtcacctgtga
ccccaccacaaaccgcatcaactccctcaccatcttttccggccagctct
ctggccaaatccctgcccaggtcggcgacttaccttatcttcaaactctg
gagttccacaagctatccaacctctctggcccaatccaaccctccattgc
aaagctcaaaagcctcacgttcctccgcctcagcaataccaacatctcag
gctctgtccctaacttcctcagccacctgaagaacctcactttcctcgac
ctttccttcaacaacctcacaggctccatccccagctcgctttctcagct
accaaacttgaacgcccttcacctagaccgtaacaagctcacaggtcata
tcccatactcatttggacaattccagggcaacattccagatttatacctc
tcccacaaccagctctcaggcaaaataccaacctcatttgccacaatgga
cttcaaccgcattgacttatcacggaacaagcttgaaggcgacgcatctg
tgatatttggagagaacaagacaacgcagattgtggacctgtcgaggaac
ttgctagaatttaatctgtcagaggtgaagtttcccacgagcttgacttc
gctggacattaaccataacagcatcaaagggagtattccggtgcagatga
cccaactgccggacttgcagttcctgaatgtgagctacaacaggctgtgt
ggta
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