GAPDH, EF579679.1-GAPDH.m1 (mRNA) Rosa rugosa

Transcript Overview
NameGAPDH
Unique NameEF579679.1-GAPDH.m1
TypemRNA
OrganismRosa rugosa ()
Sourcegenbank
Productglyceraldehyde 3-phosphate dehydrogenase
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
EF579679regionEF579679:78..630 +NCBI Rosaceae gene and mRNA sequencesn/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GAPDHEF579679.1-GAPDHRosa rugosagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EF579679.1-GAPDH.m1-cds1EF579679.1-GAPDH.m1-cds1Rosa rugosaCDS
EF579679.1-GAPDH.m1-cds2EF579679.1-GAPDH.m1-cds2Rosa rugosaCDS
EF579679.1-GAPDH.m1-cds3EF579679.1-GAPDH.m1-cds3Rosa rugosaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
GAPDHEF579679.1-GAPDH.p1Rosa rugosapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI148283458
nuccoreEF579679.1
Sequences
The following sequences are available for this feature:

mRNA sequence

>EF579679.1-GAPDH.m1 ID=EF579679.1-GAPDH.m1; Name=GAPDH; organism=Rosa rugosa; type=mRNA; length=325bp
ccacccagaagactgttgatggaccatcagcaaaggactggagaggtgga
cgtgctgcctcattcaacatcattcccagcagcactggagctgccaaggc
tgtcggaaaggttctgcctgctctcaatggcaagttgaccggaatggcct
tccgtgtacccactgttgatgtttcagttgttgacctcactgtcagactt
gagaagaaggcaacctatgaccagatcaaggctgctatcaaggaggagtc
tgagggaaagttgaagggcatcttgggttacaccgatgaggatgttgtgt
caaccgacttcattggtgacaacag
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protein sequence of GAPDH

>EF579679.1-GAPDH.p1 ID=EF579679.1-GAPDH.p1; Name=GAPDH; organism=Rosa rugosa; type=polypeptide; length=107bp
TQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAF
RVPTVDVSVVDLTVRLEKKATYDQIKAAIKEESEGKLKGILGYTDEDVVS
TDFIGDN
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mRNA from alignment at EF579679:78..630+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EF579679.1-GAPDH.m1 ID=EF579679.1-GAPDH.m1; Name=GAPDH; organism=Rosa rugosa; type=mRNA; length=553bp; location=Sequence derived from: EF579679:78..630+ (Rosa rugosa
ccacccagaagactgttgatggaccatcagcaaaggactggagaggtgga
cgtgctgcctcattcaacatcattcccagcagcactggagctgccaaggt
attttcaatattctttgtgccactgcttcagtattgttgatacacttgta
agttacatgtcagtgatacttcatctttaacagctttattaatccttgat
tttggaatatgtttaggctgtcggaaaggttctgcctgctctcaatggca
agttgaccggaatggccttccgtgtacccactgttgatgtttcagttgtt
gacctcactgtcagacttgagaagaaggcaacctatgaccagatcaaggc
tgctatcaagtaaggcttgttgaactttgttgttaattagttgcaatcaa
ggtggggtgtcatgacattacaatgcatgtcttggttctaatcttttatc
tttaattctgtctcaacagggaggagtctgagggaaagttgaagggcatc
ttgggttacaccgatgaggatgttgtgtcaaccgacttcattggtgacaa
cag
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Coding sequence (CDS) from alignment at EF579679:78..630+

>EF579679.1-GAPDH.m1 ID=EF579679.1-GAPDH.m1; Name=GAPDH; organism=Rosa rugosa; type=CDS; length=325bp; location=Sequence derived from: EF579679:78..630+ (Rosa rugosa
ccacccagaagactgttgatggaccatcagcaaaggactggagaggtgga
cgtgctgcctcattcaacatcattcccagcagcactggagctgccaaggc
tgtcggaaaggttctgcctgctctcaatggcaagttgaccggaatggcct
tccgtgtacccactgttgatgtttcagttgttgacctcactgtcagactt
gagaagaaggcaacctatgaccagatcaaggctgctatcaaggaggagtc
tgagggaaagttgaagggcatcttgggttacaccgatgaggatgttgtgt
caaccgacttcattggtgacaacag
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