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Marker Overview
| Name | FIO1 |
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| Genbank ID | N/A |
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| SNP Array ID | | Cherry 6+9K SNP array: | FIO1 |
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| Type | candidate gene marker |
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| 5' Flanking Sequence | TGTTTATGTGGGCATACAATAGGTATCAATGATTATCCAGTTACATCGCT |
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| 3' Flanking Sequence | CACGTCATAATTCTCATCATCTCTCACATTTTGTTATTGTCTTGTTCCTA |
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| Species | Prunus avium |
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| Primer 1 | isFIO1.Forward: CTGCCAAGAAGATTGCATCA |
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| Primer 2 | isFIO1.Reverse: TTCAGGTTACACAATGCACCA |
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| Publication | [view all] |
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| Contact | Stijn Vanderzande
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| Comment | peach homologue was located on the peach genome sequence and then located into the sweet cherry map using flanking markers |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2015 | Castède S, Campoy JA, Le Dantec L, Quero-García J, Barreneche T, Wenden B, Dirlewanger E. Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium). PloS one. 2015; 10(11):e0143250. |
| 2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>FIO1 ID=FIO1; Name=FIO1; organism=Prunus avium; type=genetic_marker; length=101bp
TGTTTATGTGGGCATACAATAGGTATCAATGATTATCCAGTTACATCGCT
YCACGTCATAATTCTCATCATCTCTCACATTTTGTTATTGTCTTGTTCCT
A
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