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Marker Overview
| Name | s4_12766515 |
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | TGGTTCAGGTGTTGGGATTATGTACTATAAAATCTGATTAAACCAACCTTGACCAATGTG
TATGTGTGGTGAAATGAAATATATAAGGTTGGGCATGGGGTTCTTTGAACATTACGCATG
CACTCTCGCTGCCACTTCATTATTAGTCTG |
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| 3' Flanking Sequence | TACTCATTTTTATTGGTATACATTTGAAGCACAGAATAAAAATCTTGTTGAACATTTCCC
ACATTGTCTAGGATAGATTTTATTATTTTTCCTTGAACTTATGAAAAAAGCGGTGGTAGG
CTACCCCCTTCTAAATCAGTGGCCTTTACT |
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| Species | Prunus avium |
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| Publication | [view all] |
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| Contact | Patricio Hinrichsen
Stijn Vanderzande
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| Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intragenic SNPs |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
| 2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s4_12766515 ID=s4_12766515; Name=s4_12766515; organism=Prunus avium; type=genetic_marker; length=301bp
TGGTTCAGGTGTTGGGATTATGTACTATAAAATCTGATTAAACCAACCTT
GACCAATGTGTATGTGTGGTGAAATGAAATATATAAGGTTGGGCATGGGG
TTCTTTGAACATTACGCATGCACTCTCGCTGCCACTTCATTATTAGTCTG
YTACTCATTTTTATTGGTATACATTTGAAGCACAGAATAAAAATCTTGTT
GAACATTTCCCACATTGTCTAGGATAGATTTTATTATTTTTCCTTGAACT
TATGAAAAAAGCGGTGGTAGGCTACCCCCTTCTAAATCAGTGGCCTTTAC
T
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