MDP0000010844, MDP0000010844 (mRNA) Malus spp. (apple)

Transcript Overview
NameMDP0000010844
Unique NameMDP0000010844
TypemRNA
OrganismMalus x domestica (Apple)
Sequence length5545
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA2012-07-23
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MDP0000010844_exon_1MDP0000010844_exon_1Malus x domesticaCDS
MDP0000010844_exon_2MDP0000010844_exon_2Malus x domesticaCDS
MDP0000010844_exon_3MDP0000010844_exon_3Malus x domesticaCDS
MDP0000010844_exon_4MDP0000010844_exon_4Malus x domesticaCDS
MDP0000010844_exon_5MDP0000010844_exon_5Malus x domesticaCDS
MDP0000010844_exon_6MDP0000010844_exon_6Malus x domesticaCDS
MDP0000010844_exon_7MDP0000010844_exon_7Malus x domesticaCDS
MDP0000010844_exon_8MDP0000010844_exon_8Malus x domesticaCDS
MDP0000010844_exon_9MDP0000010844_exon_9Malus x domesticaCDS
MDP0000010844_exon_10MDP0000010844_exon_10Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MDP0000010844MDP0000010844Malus x domesticapolypeptide


InterPro
Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 152..315
score: 1.9
IPR000195Rab-GTPase-TBC domainSMARTSM00164Domain in Tre-2, BUB2p, and Cdc16p. Probablecoord: 60..343
score: 4
IPR000195Rab-GTPase-TBC domainPROFILEPS50086TBC_RABGAPcoord: 63..318
score: 36
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 32..278
score: 4e-51coord: 253..424
score: 5.9
NoneNo IPR availableGENE3D1.10.8.270no descriptioncoord: 168..241
score: 4.3
NoneNo IPR availablePANTHERPTHR22957FAMILY NOT NAMEDcoord: 1..432
score: 9e
NoneNo IPR availablePANTHERPTHR22957:SF30GTPASE ACTIVATING PROTEIN-RELATEDcoord: 1..432
score: 9e
NoneNo IPR availableSEGsegsegcoord: 88..97
score: NAcoord: 418..429
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>MDP0000010844 ID=MDP0000010844; Name=MDP0000010844; organism=Malus x domestica; type=mRNA; length=5545bp
ATGTGGAGGGACGCTGGGACTCCTGCTGATTCTTTCTATGAAGTACGCCC
TGAGTGTACTGATGTTCCCAAAACCCGCTTCAAGATCAAGGTTTTTCTTT
CTGTTCTTTGTTTGATTGTTGGATTTGGATTTAAAGATTGGGTTTTTAGA
TACCCATCGTCTTAATTTTGATCTTTTCCCATTTTGAAAACCAAGATATT
GTGTAATGAATCAGATTTGATAATGCAGGGTGCTAGATTTTTAGTTATGA
TCATGAATTGGTGGTGTTGATATAGAATCACAAAGTGATGAAATTGGAAA
ATTTTTAGATTTTTCGGAAGGAGAAAGTTGGGAATAGTGTTAATGTTAAT
GTTAATTGATCACCTTGTTGAATTTTGGAAGGAGAATGTAGGACAGATAT
AGGATTATTCKGGTGACTAAAACCGGAGTTATGAGGATCTTGTTGGTTCT
CAATACATATCCGAGAGTCAATATGCTCCCACCCGCTAACGCCTACCCAA
TATGTTGGGGATATTCGGTCTGGTKTTGCTTATGCACAACTTCATAGAAA
TCTGTATATGAATGTGTGAACRMTTACGTACACAAATATGAAATTGATAA
TTGTGAGCAATTAAGGGAAATATAGCTATATTTGCACAAACCCTTGCCTC
AAACTCCAGCATGTCAGAATCTTTGGCTTGAAAGTTTWCTCAAGTTTTGA
CATTTTAACTCYGTGTCCTTCTCCATATATCAGGATACGTTTGTAACGCC
AATATTTGTGATCTGGATCACCAAAGTATTATGAATCGGAACATCGATCT
GGATTATGTTTCATGGGGGTTGGCCTTAATAAGAAAATGATTTGATTATA
CTAAGGCTTTTAAACAATGAGAAACTGATAAAGATTCATTGTGTATTCTA
TTAAATATGTCTGCAATTGTCTTATTACTTCATAGTGATTTCAATGTCTC
ATTACCATGATGTGCTTCTTTCAATCTCCATGCCTTATTTCTATTTGCTC
ATGCAGGCAGGTAAAACTCTAAGTGTAAGGAAATGGCAGGCTGCATTTAG
TCCAGAAGGCCAACTGGATATAGGCAAGACTTTAAGTCGAATTCACCGTG
GGGTGAGTGAATCTTCATGATTCAAAGCTACCACTTAGTATGCTAAATTT
TGTCGTTATATTTATAAAACTCAGTTTTGGATTCTGTGTAGCTATCAGAG
CGTCTCAACAATCCTATCAATACTTGTCTTTATGGATTCACCTTTTTCTC
TTTATATTTTTGTTGTTCTTTTATTGTTTTACTCATGAAATAATCAATTT
GCAAGGCTAGTAGTCAACTTCAATCCATAATTATATTATATTTGGCAATC
AGGGAATCCATCCATCAATTAGAGGAGAAGTTTGGGAGTTTCTATTAGGT
TGTTATGATCCTACGAGCACATTTGATGAAAGAGAGCAGATTCGGCAACG
TCGAAGGTATATCTTGTTTCCTGCCTTACTCGGGTTMCTTCAAATTTATT
AGTCATTTACCTTTTATTTTCTCTTTATCTAATGAAGTTTCCTTGGGTAG
TACACTCACAATTGATGAGAATGGTCTAAGGAGAAATTATTTCTGGTTCA
TGTATCTTTTAGTACTGCAATTCGTTAAGTAATTTAAAGATGATCTTTTG
GGAAAATGATCAATATCATGGGTTGAGGTTTATGACTTGCGATGTACCCC
AAGTGAGTAAATTTAGTTAACAACAATGGCGAAACATGCTAGCAAAAGAC
TCAGGTTKTCCTCTTCATACGATAGGGATCCAGGCTCCAGCATCTCTATT
TTATGTGGGATGTGTATATTTCCAAACGTACAGGCTGTACATAATGTTAT
CTTGTCAGATTCCAGCATGTTATGCTTAACCTGTCCCATTATTCGGTATT
ATTTGTTAAGTATYATGCTTTGTCCTTTTCAGAGTGCAATATGCTCGGTC
GAAGGAAGATTGCCGTCAAATGTTTCCTGTTGTTGGAAGTGGTAGGTTTA
TCACTGCCCCCGTAATCACTGAAGATGGTCAGCCCATTCAGGATCCCATA
GTACTTTCACAAATAAATCCAGACAATGGTTCAAGTACAAACCGTAAGAA
TGTCATGGAACCAGTAACGGACAAGAAAGTAATCCAGTGGATGCTTACTC
TACATCAGATAGGTTTGTGATATATTTTTTTGTGTTTGCATACATATTAT
GGTTATTTTGGAGGAACTTCTATTTTATTGTCAGGCATTTTTTCTTTTTG
TTGTYAGTGCCCTTAGACTATTTTATTGGTCAATTCTATGKTTTCATCAT
GTCATTACATCACCTACCTGCAACATGTGAAAAAAGTACTGAACTTGATG
GATTGCAGAATTTTCATGTTTAATAATGATTTGTTAGATAACTTTTCTGA
TTATCTTTATTTGTATGCCAGGTCTTGACGTGGTTCGTACTGACAGGACA
CTAGTGTTTTACGAGAAGCAAGAAAACTTGTCAAAACTTTGGGATATTTT
AGCCGTTTATGCCTGGATAGATACAGATGTTGGTTATTGTCAAGGTTGGT
AACATAGGAGTGATTTTACTACTGGTCCATCCCTTCCTTACACTTCTGGG
AAGTGAAGAAAAAATTCATTTTGATTTTTTCAAAAGAAAAAAAAAATTGA
TGTTTCTAAACTCCGAAATTCATGACACAATGATCAGGAATGAGTGATCT
TTGCTCCCCCATGATTATCCTTCTTGATGATGAAGCAGATGCATTTTGGT
GCTTTGAACGCTTGATGCGCAGACTGGTAAAACTTTGCACTAAATCTTTC
ACTTTGTATATTATTCTGAACTTGCATCAAATCAATGCCTACCATGTGTG
TCAAAAAACTAGGATTGCTAGTCTCTTCCTTCCAGAAATTAACAGAGGAG
ATGTGCAATCTTAAATCCATGTATTAATGAGATTCATTAGCTGTTTTTGT
TCATCTACTTCTGTCCTTGAACAGTTGCTACAATATTTTTCTTTCGATTT
GAAGTTACATGTTTTCTTTAAAGCTACAAAGTTACTTGGTGATGGTTAAT
TTTGGATTCCAGTTTCTTATGACTTGTTCCATTTGAAATTTAAAGCGAGG
AAATTTCAGATGTACCGATAGCTCTGTTGGGGTGGAGGCACAACTAAGTA
ATCTGGCTTCAATTACTCAAGTCATTGATCCAAAACTTCATCAGCACTTA
GGTATTGTCTTTTTTATTTGCTTTACTAAGCTCTACAATTATGTCCATTT
ACTTGTCAGACAGAAAATATTTGTTTATSTAAAAAGTTGGAGACATCATA
TGTGATTTTCAYCATTTTTCATTATTCATAGTCTTCTTCTCAGAACTGAT
CATGAAAATTCATGCTCGCCAACCGTTTGGATGAATATTCGATACATTTA
TTTATGGAAAACAAAGACGTTTATTAGGATTTGAATATCAAATTCGCTGT
GTGTTTCTGTCATGTCTCTCTTACGTTGCTCAACATAATGCTAAAAAATG
AGGAAGATAGTAACAGATATGTTCAATTTGGAGTGCAGAGACACTAGGCG
GAGGTGACTATTTATTTGCTTTCCGGATGCTTATGGTTTTGTTCCGACGA
GAATTCTCTTTTTGTGATTCTTTATACCTTTGGGAGGTAAGAATGAGTTT
CTGTTAGTACCTTTTTGATATTTTTCTGTTCTTCCTTTTGGATTTTTTTT
TAATATATCTAATTATTGCATGTATAAATACTTTTATCGAATCCGTGAGA
CTATTTCTGGGAAACCACTTCATTTTTTCGTAATCATCAAATATTTCTCC
ACAATTCCACTTATATATAGTTCMTTAAATTTAATACTTATGCAGAATTT
TTTGTATTGGACCTTATTTCTTCCGAGTAAAAGTTGGCAAGTTAGTACTT
ATTTGACAAGGTACTTTTCGAAAATAGATTTTAAGAACTATCGCACGCAT
TTGATATTAAAGACCAAACTCCAGATCATTTGTTTGTGTAATTGGATGTA
TGTGTTCCTGATTGAAAAGTATCGATGCACCCTGTTCTATAATAAAGAAG
GGGTGTCCTGCACAGTGAATTTCTGCAGCTATATAGTTATTGCTTTTTCT
TTTTTGTTTTTGGCCAAATATATCCTTTTTCTTTGTGCACGTATACATGG
TTATCCTGCATCTTGAACTTAAAAGATCGTATTTATATTGGTAAGAATTT
ATCTCATTTAAACTTTGACAGATGATGTGGGCTCTTGAGTATGACCCTGA
CTTGGTCAGTGTGTACGAAGAATCTGATACTGATAGTGAGAAGGCCGAGG
GATCTAAAGGGAAACCAAAGTCAACACGTCAGTGTGGGAAGTATGAGAGG
GAAAACATGAAAAGTGGAGGAAAGAATTCAGAAGCACCACTCCCAATTTC
TGTTTTCCTTGTTGCCAGTGTCCTGAAAGATAAGAGCTCAAAGCTACTTA
CAGAAGCTCGGGGTCTGGATGATGTTGTCAAGGTTAGCATTATCAGTTGA
CTATTTGCTATTCTTAGAACCGTTAWACTTCCAGCTTATATTGAGAATGA
TATTACATGACTTAAACAGAAAACATGTCCATGTGGGGACAGCCTCGTCA
TAAATTCATCTAAAACAATAAACAAGAGTTACTAAATGTCAGAAGCCACT
TGCCGTGGCCAAACTAGGGTCCAGGATGCTGGGTGGATTTGACATACATG
ATAAATTATAATTTACATCTGAAAGTAAAATATGTAATAAAGTGGAAAGG
AATAGGAGACTGGAGCAGCAACATTGATCAGCCAACCCTATTAAATCTTT
CCTTGAAAATGTGGATTCTTCTACGGTAGTCAAACATGSTTCGGAGAAGA
ATATGATGCTATCGTTTTGTTCTTTCACAAATGATTATATAAAAATTCTA
AAAGCCAAATGAAACTGTTGTTCCAATGTTGTTATCTTGGRTTCCAATTT
TGTCCGTGTAGTTTTACAACTTACATTAGGTTACAATCAAGATCAAAACC
CTGAAAAATAATCACATCTTCATGCTGTTTTGTAAGGGATTGGACCCTAA
GTTTGACATGTTTATTCCTTAACGGTTCTTGAAAATTTCAAATGCGTTGC
CTAATCCCTTAAAAAAAAAAACATGAAAAGTGATCATCTTAAGGATTTTT
GGCTTGATTGCAACCTAATGTTAACTAGCAGGATATAGTTACAAGTTTTG
CAGGACGAAATTGGAAGCCCCTAGCAAACTGCGTGGACTAAAATTGTCTT
TAGCCATTTCTAATGCCCTAAGGGAGACGTTCAAAATAGTTCTCTAGAGT
CGTTAGGGACTGGTGAAGAATCTTTGACCCGTGTAATAAACAAGTACTTA
GAGTTGTCAAATTTTCAGTTGGTTGAATTGAAACTTAATTTTTGTACAAC
TTTTACCTGTCTGTTTACTTACCTCACTCTTTTTCTCCGCCAGATATTGA
ATGACATAACTGGAAATTTAGATGCCAAAAAAGCTTGCACTGGGGCATTG
AAACTCCACAAGAAATATCTAAAAAAGGTACTTCAATTTATTTTG
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protein sequence of MDP0000010844

>MDP0000010844 ID=MDP0000010844; Name=MDP0000010844; organism=Malus x domestica; type=polypeptide; length=433bp
MWRDAGTPADSFYEVRPECTDVPKTRFKIKAGKTLSVRKWQAAFSPEGQL
DIGKTLSRIHRGGIHPSIRGEVWEFLLGCYDPTSTFDEREQIRQRRRVQY
ARSKEDCRQMFPVVGSGRFITAPVITEDGQPIQDPIVLSQINPDNGSSTN
RKNVMEPVTDKKVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDIL
AVYAWIDTDVGYCQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRC
TDSSVGVEAQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRR
EFSFCDSLYLWEMMWALEYDPDLVSVYEESDTDSEKAEGSKGKPKSTRQC
GKYERENMKSGGKNSEAPLPISVFLVASVLKDKSSKLLTEARGLDDVVKI
LNDITGNLDAKKACTGALKLHKKYLKKVLQFIL
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mRNA from alignment at chr11:25320241..25325785-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000010844 ID=MDP0000010844; Name=MDP0000010844; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr11:25320241..25325785- (Malus x domestica
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mRNA from alignment at MDC006040.396:20581..26125-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000010844 ID=MDP0000010844; Name=MDP0000010844; organism=Malus x domestica; type=mRNA; length=5545bp; location=Sequence derived from: MDC006040.396:20581..26125- (Malus x domestica
ATGTGGAGGGACGCTGGGACTCCTGCTGATTCTTTCTATGAAGTACGCCC
TGAGTGTACTGATGTTCCCAAAACCCGCTTCAAGATCAAGGTTTTTCTTT
CTGTTCTTTGTTTGATTGTTGGATTTGGATTTAAAGATTGGGTTTTTAGA
TACCCATCGTCTTAATTTTGATCTTTTCCCATTTTGAAAACCAAGATATT
GTGTAATGAATCAGATTTGATAATGCAGGGTGCTAGATTTTTAGTTATGA
TCATGAATTGGTGGTGTTGATATAGAATCACAAAGTGATGAAATTGGAAA
ATTTTTAGATTTTTCGGAAGGAGAAAGTTGGGAATAGTGTTAATGTTAAT
GTTAATTGATCACCTTGTTGAATTTTGGAAGGAGAATGTAGGACAGATAT
AGGATTATTCKGGTGACTAAAACCGGAGTTATGAGGATCTTGTTGGTTCT
CAATACATATCCGAGAGTCAATATGCTCCCACCCGCTAACGCCTACCCAA
TATGTTGGGGATATTCGGTCTGGTKTTGCTTATGCACAACTTCATAGAAA
TCTGTATATGAATGTGTGAACRMTTACGTACACAAATATGAAATTGATAA
TTGTGAGCAATTAAGGGAAATATAGCTATATTTGCACAAACCCTTGCCTC
AAACTCCAGCATGTCAGAATCTTTGGCTTGAAAGTTTWCTCAAGTTTTGA
CATTTTAACTCYGTGTCCTTCTCCATATATCAGGATACGTTTGTAACGCC
AATATTTGTGATCTGGATCACCAAAGTATTATGAATCGGAACATCGATCT
GGATTATGTTTCATGGGGGTTGGCCTTAATAAGAAAATGATTTGATTATA
CTAAGGCTTTTAAACAATGAGAAACTGATAAAGATTCATTGTGTATTCTA
TTAAATATGTCTGCAATTGTCTTATTACTTCATAGTGATTTCAATGTCTC
ATTACCATGATGTGCTTCTTTCAATCTCCATGCCTTATTTCTATTTGCTC
ATGCAGGCAGGTAAAACTCTAAGTGTAAGGAAATGGCAGGCTGCATTTAG
TCCAGAAGGCCAACTGGATATAGGCAAGACTTTAAGTCGAATTCACCGTG
GGGTGAGTGAATCTTCATGATTCAAAGCTACCACTTAGTATGCTAAATTT
TGTCGTTATATTTATAAAACTCAGTTTTGGATTCTGTGTAGCTATCAGAG
CGTCTCAACAATCCTATCAATACTTGTCTTTATGGATTCACCTTTTTCTC
TTTATATTTTTGTTGTTCTTTTATTGTTTTACTCATGAAATAATCAATTT
GCAAGGCTAGTAGTCAACTTCAATCCATAATTATATTATATTTGGCAATC
AGGGAATCCATCCATCAATTAGAGGAGAAGTTTGGGAGTTTCTATTAGGT
TGTTATGATCCTACGAGCACATTTGATGAAAGAGAGCAGATTCGGCAACG
TCGAAGGTATATCTTGTTTCCTGCCTTACTCGGGTTMCTTCAAATTTATT
AGTCATTTACCTTTTATTTTCTCTTTATCTAATGAAGTTTCCTTGGGTAG
TACACTCACAATTGATGAGAATGGTCTAAGGAGAAATTATTTCTGGTTCA
TGTATCTTTTAGTACTGCAATTCGTTAAGTAATTTAAAGATGATCTTTTG
GGAAAATGATCAATATCATGGGTTGAGGTTTATGACTTGCGATGTACCCC
AAGTGAGTAAATTTAGTTAACAACAATGGCGAAACATGCTAGCAAAAGAC
TCAGGTTKTCCTCTTCATACGATAGGGATCCAGGCTCCAGCATCTCTATT
TTATGTGGGATGTGTATATTTCCAAACGTACAGGCTGTACATAATGTTAT
CTTGTCAGATTCCAGCATGTTATGCTTAACCTGTCCCATTATTCGGTATT
ATTTGTTAAGTATYATGCTTTGTCCTTTTCAGAGTGCAATATGCTCGGTC
GAAGGAAGATTGCCGTCAAATGTTTCCTGTTGTTGGAAGTGGTAGGTTTA
TCACTGCCCCCGTAATCACTGAAGATGGTCAGCCCATTCAGGATCCCATA
GTACTTTCACAAATAAATCCAGACAATGGTTCAAGTACAAACCGTAAGAA
TGTCATGGAACCAGTAACGGACAAGAAAGTAATCCAGTGGATGCTTACTC
TACATCAGATAGGTTTGTGATATATTTTTTTGTGTTTGCATACATATTAT
GGTTATTTTGGAGGAACTTCTATTTTATTGTCAGGCATTTTTTCTTTTTG
TTGTYAGTGCCCTTAGACTATTTTATTGGTCAATTCTATGKTTTCATCAT
GTCATTACATCACCTACCTGCAACATGTGAAAAAAGTACTGAACTTGATG
GATTGCAGAATTTTCATGTTTAATAATGATTTGTTAGATAACTTTTCTGA
TTATCTTTATTTGTATGCCAGGTCTTGACGTGGTTCGTACTGACAGGACA
CTAGTGTTTTACGAGAAGCAAGAAAACTTGTCAAAACTTTGGGATATTTT
AGCCGTTTATGCCTGGATAGATACAGATGTTGGTTATTGTCAAGGTTGGT
AACATAGGAGTGATTTTACTACTGGTCCATCCCTTCCTTACACTTCTGGG
AAGTGAAGAAAAAATTCATTTTGATTTTTTCAAAAGAAAAAAAAAATTGA
TGTTTCTAAACTCCGAAATTCATGACACAATGATCAGGAATGAGTGATCT
TTGCTCCCCCATGATTATCCTTCTTGATGATGAAGCAGATGCATTTTGGT
GCTTTGAACGCTTGATGCGCAGACTGGTAAAACTTTGCACTAAATCTTTC
ACTTTGTATATTATTCTGAACTTGCATCAAATCAATGCCTACCATGTGTG
TCAAAAAACTAGGATTGCTAGTCTCTTCCTTCCAGAAATTAACAGAGGAG
ATGTGCAATCTTAAATCCATGTATTAATGAGATTCATTAGCTGTTTTTGT
TCATCTACTTCTGTCCTTGAACAGTTGCTACAATATTTTTCTTTCGATTT
GAAGTTACATGTTTTCTTTAAAGCTACAAAGTTACTTGGTGATGGTTAAT
TTTGGATTCCAGTTTCTTATGACTTGTTCCATTTGAAATTTAAAGCGAGG
AAATTTCAGATGTACCGATAGCTCTGTTGGGGTGGAGGCACAACTAAGTA
ATCTGGCTTCAATTACTCAAGTCATTGATCCAAAACTTCATCAGCACTTA
GGTATTGTCTTTTTTATTTGCTTTACTAAGCTCTACAATTATGTCCATTT
ACTTGTCAGACAGAAAATATTTGTTTATSTAAAAAGTTGGAGACATCATA
TGTGATTTTCAYCATTTTTCATTATTCATAGTCTTCTTCTCAGAACTGAT
CATGAAAATTCATGCTCGCCAACCGTTTGGATGAATATTCGATACATTTA
TTTATGGAAAACAAAGACGTTTATTAGGATTTGAATATCAAATTCGCTGT
GTGTTTCTGTCATGTCTCTCTTACGTTGCTCAACATAATGCTAAAAAATG
AGGAAGATAGTAACAGATATGTTCAATTTGGAGTGCAGAGACACTAGGCG
GAGGTGACTATTTATTTGCTTTCCGGATGCTTATGGTTTTGTTCCGACGA
GAATTCTCTTTTTGTGATTCTTTATACCTTTGGGAGGTAAGAATGAGTTT
CTGTTAGTACCTTTTTGATATTTTTCTGTTCTTCCTTTTGGATTTTTTTT
TAATATATCTAATTATTGCATGTATAAATACTTTTATCGAATCCGTGAGA
CTATTTCTGGGAAACCACTTCATTTTTTCGTAATCATCAAATATTTCTCC
ACAATTCCACTTATATATAGTTCMTTAAATTTAATACTTATGCAGAATTT
TTTGTATTGGACCTTATTTCTTCCGAGTAAAAGTTGGCAAGTTAGTACTT
ATTTGACAAGGTACTTTTCGAAAATAGATTTTAAGAACTATCGCACGCAT
TTGATATTAAAGACCAAACTCCAGATCATTTGTTTGTGTAATTGGATGTA
TGTGTTCCTGATTGAAAAGTATCGATGCACCCTGTTCTATAATAAAGAAG
GGGTGTCCTGCACAGTGAATTTCTGCAGCTATATAGTTATTGCTTTTTCT
TTTTTGTTTTTGGCCAAATATATCCTTTTTCTTTGTGCACGTATACATGG
TTATCCTGCATCTTGAACTTAAAAGATCGTATTTATATTGGTAAGAATTT
ATCTCATTTAAACTTTGACAGATGATGTGGGCTCTTGAGTATGACCCTGA
CTTGGTCAGTGTGTACGAAGAATCTGATACTGATAGTGAGAAGGCCGAGG
GATCTAAAGGGAAACCAAAGTCAACACGTCAGTGTGGGAAGTATGAGAGG
GAAAACATGAAAAGTGGAGGAAAGAATTCAGAAGCACCACTCCCAATTTC
TGTTTTCCTTGTTGCCAGTGTCCTGAAAGATAAGAGCTCAAAGCTACTTA
CAGAAGCTCGGGGTCTGGATGATGTTGTCAAGGTTAGCATTATCAGTTGA
CTATTTGCTATTCTTAGAACCGTTAWACTTCCAGCTTATATTGAGAATGA
TATTACATGACTTAAACAGAAAACATGTCCATGTGGGGACAGCCTCGTCA
TAAATTCATCTAAAACAATAAACAAGAGTTACTAAATGTCAGAAGCCACT
TGCCGTGGCCAAACTAGGGTCCAGGATGCTGGGTGGATTTGACATACATG
ATAAATTATAATTTACATCTGAAAGTAAAATATGTAATAAAGTGGAAAGG
AATAGGAGACTGGAGCAGCAACATTGATCAGCCAACCCTATTAAATCTTT
CCTTGAAAATGTGGATTCTTCTACGGTAGTCAAACATGSTTCGGAGAAGA
ATATGATGCTATCGTTTTGTTCTTTCACAAATGATTATATAAAAATTCTA
AAAGCCAAATGAAACTGTTGTTCCAATGTTGTTATCTTGGRTTCCAATTT
TGTCCGTGTAGTTTTACAACTTACATTAGGTTACAATCAAGATCAAAACC
CTGAAAAATAATCACATCTTCATGCTGTTTTGTAAGGGATTGGACCCTAA
GTTTGACATGTTTATTCCTTAACGGTTCTTGAAAATTTCAAATGCGTTGC
CTAATCCCTTAAAAAAAAAAACATGAAAAGTGATCATCTTAAGGATTTTT
GGCTTGATTGCAACCTAATGTTAACTAGCAGGATATAGTTACAAGTTTTG
CAGGACGAAATTGGAAGCCCCTAGCAAACTGCGTGGACTAAAATTGTCTT
TAGCCATTTCTAATGCCCTAAGGGAGACGTTCAAAATAGTTCTCTAGAGT
CGTTAGGGACTGGTGAAGAATCTTTGACCCGTGTAATAAACAAGTACTTA
GAGTTGTCAAATTTTCAGTTGGTTGAATTGAAACTTAATTTTTGTACAAC
TTTTACCTGTCTGTTTACTTACCTCACTCTTTTTCTCCGCCAGATATTGA
ATGACATAACTGGAAATTTAGATGCCAAAAAAGCTTGCACTGGGGCATTG
AAACTCCACAAGAAATATCTAAAAAAGGTACTTCAATTTATTTTG
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Coding sequence (CDS) from alignment at MDC006040.396:20581..26125-

>MDP0000010844 ID=MDP0000010844; Name=MDP0000010844; organism=Malus x domestica; type=CDS; length=1299bp; location=Sequence derived from: MDC006040.396:20581..26125- (Malus x domestica
ATGTGGAGGGACGCTGGGACTCCTGCTGATTCTTTCTATGAAGTACGCCC
TGAGTGTACTGATGTTCCCAAAACCCGCTTCAAGATCAAGGCAGGTAAAA
CTCTAAGTGTAAGGAAATGGCAGGCTGCATTTAGTCCAGAAGGCCAACTG
GATATAGGCAAGACTTTAAGTCGAATTCACCGTGGGGGAATCCATCCATC
AATTAGAGGAGAAGTTTGGGAGTTTCTATTAGGTTGTTATGATCCTACGA
GCACATTTGATGAAAGAGAGCAGATTCGGCAACGTCGAAGAGTGCAATAT
GCTCGGTCGAAGGAAGATTGCCGTCAAATGTTTCCTGTTGTTGGAAGTGG
TAGGTTTATCACTGCCCCCGTAATCACTGAAGATGGTCAGCCCATTCAGG
ATCCCATAGTACTTTCACAAATAAATCCAGACAATGGTTCAAGTACAAAC
CGTAAGAATGTCATGGAACCAGTAACGGACAAGAAAGTAATCCAGTGGAT
GCTTACTCTACATCAGATAGGTCTTGACGTGGTTCGTACTGACAGGACAC
TAGTGTTTTACGAGAAGCAAGAAAACTTGTCAAAACTTTGGGATATTTTA
GCCGTTTATGCCTGGATAGATACAGATGTTGGTTATTGTCAAGGAATGAG
TGATCTTTGCTCCCCCATGATTATCCTTCTTGATGATGAAGCAGATGCAT
TTTGGTGCTTTGAACGCTTGATGCGCAGACTGCGAGGAAATTTCAGATGT
ACCGATAGCTCTGTTGGGGTGGAGGCACAACTAAGTAATCTGGCTTCAAT
TACTCAAGTCATTGATCCAAAACTTCATCAGCACTTAGAGACACTAGGCG
GAGGTGACTATTTATTTGCTTTCCGGATGCTTATGGTTTTGTTCCGACGA
GAATTCTCTTTTTGTGATTCTTTATACCTTTGGGAGATGATGTGGGCTCT
TGAGTATGACCCTGACTTGGTCAGTGTGTACGAAGAATCTGATACTGATA
GTGAGAAGGCCGAGGGATCTAAAGGGAAACCAAAGTCAACACGTCAGTGT
GGGAAGTATGAGAGGGAAAACATGAAAAGTGGAGGAAAGAATTCAGAAGC
ACCACTCCCAATTTCTGTTTTCCTTGTTGCCAGTGTCCTGAAAGATAAGA
GCTCAAAGCTACTTACAGAAGCTCGGGGTCTGGATGATGTTGTCAAGATA
TTGAATGACATAACTGGAAATTTAGATGCCAAAAAAGCTTGCACTGGGGC
ATTGAAACTCCACAAGAAATATCTAAAAAAGGTACTTCAATTTATTTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GAP-TBC_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005097Rab GTPase activator activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
Vocabulary: Biological Process
TermDefinition
GO:0032313regulation of Rab GTPase activity