MDP0000206032, MDP0000206032 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000206032
Unique Name	MDP0000206032
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	4541

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr11	chromosome	chr11:22953305..22957845 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC018668.117	contig	MDC018668.117:4685..9225 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000206032_exon_1	MDP0000206032_exon_1	Malus x domestica	CDS
MDP0000206032_exon_2	MDP0000206032_exon_2	Malus x domestica	CDS
MDP0000206032_exon_3	MDP0000206032_exon_3	Malus x domestica	CDS
MDP0000206032_exon_4	MDP0000206032_exon_4	Malus x domestica	CDS
MDP0000206032_exon_5	MDP0000206032_exon_5	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000206032	MDP0000206032	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000061	SWAP/Surp	PFAM	PF01805	Surp	coord: 192..240 score: 9.4e-12coord: 402..452 score: 1.4
IPR000061	SWAP/Surp	SMART	SM00648	Suppressor-of-White-APricot splicing regulat	coord: 192..245 score: 4.8e-17coord: 403..456 score: 2.6
IPR000061	SWAP/Surp	PROFILE	PS50128	SURP	coord: 194..236 score: 14.883coord: 405..447 score: 15
IPR000061	SWAP/Surp	SUPERFAMILY	109905	Surp module (SWAP domain)	coord: 167..251 score: 7.3e-17coord: 376..462 score: 3
IPR019147	Suppressor of white apricot N-terminal domain	PFAM	PF09750	DRY_EERY	coord: 1..97 score: 1.3
None	No IPR available	PANTHER	PTHR13161	FAMILY NOT NAMED	coord: 1..929 score: 2e
None	No IPR available	PANTHER	PTHR13161:SF1	GB DEF: ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MCO15	coord: 1..929 score: 2e
None	No IPR available	SEG	seg	seg	coord: 50..67 score: NAcoord: 90..96 score: NAcoord: 282..291 score: NAcoord: 603..624 score: NAcoord: 668..680 score: NAcoord: 713..724 score: NAcoord: 727..795 score: NAcoord: 805..829 score: NAcoord: 836..857 score
None	No IPR available	SEG	seg	seg	coord: 12..47 score: NAcoord: 72..96 score
None	No IPR available	SEG	seg	seg	coord: 22..48 score
None	No IPR available	SEG	seg	seg	coord: 45..53 score
None	No IPR available	SEG	seg	seg	coord: 13..26 score: NAcoord: 42..55 score
None	No IPR available	SEG	seg	seg	coord: 1..18 score: NAcoord: 41..52 score
None	No IPR available	SEG	seg	seg	coord: 29..48 score
None	No IPR available	SEG	seg	seg	coord: 53..64 score
None	No IPR available	SEG	seg	seg	coord: 96..116 score
None	No IPR available	SEG	seg	seg	coord: 111..127 score
None	No IPR available	SEG	seg	seg	coord: 50..56 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr11:22953305..22957845+
mRNA from alignment at MDC018668.117:4685..9225+
coding sequence from alignment at MDC018668.117:4685..9225+

mRNA sequence

>MDP0000206032 ID=MDP0000206032; Name=MDP0000206032; organism=Malus x domestica; type=mRNA; length=4541bp
ATGGACATGGAGGTGGTGGGCCGCCACGCGCTTCTCTTCGACGACGACAA
CAACGCCTCGTTCGTCAATTCACCCGACGCCCTCGTCGAGTGGAACTCGC
TCTTCATCGACCGCTACGATGTTCGCCACCTCCTCCCCAACCCTATGCCC
CCTCGCACGCGCCGGCGACATCTCACGCGCTCATCCTCTTCGCCGCCGCC
TTACCACGATGCCGCGCTCGAGTCGGAGCTCGATCAGGAGCGCTACCTCG
ATTTGCCGTCGCCGTCCGAAGAACAGGAACAAGAACAAGGTAAATTGTTA
ATCCCTCAGTTAAAATTTATTAAACTTTGTATTGAATATAGTATGATTTC
TGATAGATTTGGTATTCTGGATTTGTTACTATATATATATATATATATAT
ATATATATATTTGTTATTTGGTTTATGGGAAAATGAAAGAAAAGGAATTA
AAATTTAATGGTTAATGACCTTTCGTTTCAAAGGSATGTCAAATTAGCTG
AAGTGAAATTGTTGCGTGTTGTAGGCTTTAGTAGATTAAGGTTCCATATT
GTCGCCCTGATTTGTGCTTCACAAGGGTTTTATTAAAAGATTGAATGGAG
TAGGCTTTTATGTGTGTCCTGGTAATCTGGTTTTAACTCAAATTCAGGAA
TACCTACAAACTATTTGTTTGGGACATGAATACATGCAGATTGATCTGCC
TAAGAAGAGCAAAGAAAGGGTTGTTAAGTGGTGTAGGTTATGAGTGTTAA
ACATTTCATTATTTTGCAAACAATTACTAAACGGTGGAACAATGAATGGT
GATTGAATAAGTGTGGACTTTGTTTTAGGAAGAAGTATCAGTGTTTGAAA
ATGAGTGCAGAGTAAAATGGAGTTATGAAATTTTCAAAACTTAGGATTAA
AGGAAATGTAGATTTAGGTAGTGGTGTCTTTTGGGTTGGCTATCATTCAA
GGGTTTGGAGGTTAGTTTGTGGTCAGTTGTGTAGCCATTAGAGTACTGCA
CTGGATGTTTGTTTGATTCATGATATTTGTTGAAATGATCTGTTCGAGTA
GAACAAAGAGAACCTCTTCATTTGTACTGAAAATGGAGAGGGTTGGTTCT
TTAATAGAAAACTGTGGAATGCATAAACCCCCCAGAATTGGGAATATGAT
CCACTTGGACCTTAAGGCCTCGATACGATGGAACTCTTGTTTTTTATGGA
AGTTGGAATTGGGTCAGATCCTGAGGGTGTTCTTTTCGTTCCTTGTTTGC
TTGGGTTGGGGGGAGGGGRAAARGAGGGAGCAACAGTTCAAGACYATGAT
CGAGAGACGTGTTTGGTCTCTTCCTTCTATCAATGTTTTGTTTTTTGCAT
TATTTTTTCAGTTTGTAGGATGGGACATAGTTTGCAACAGTTGCATTTAT
CAGAGACACAAGTAAGAATATTCCTTTCTAACTGTAGTCTCTCTTTTATT
TATATTTTCCCTGCTTGGTATATTAATGACAGCTTTGGGTAAACTTGATG
TGTGTAAGATTGATTTTGATCATTAAATCTTTATGTCTTGATATAGGTAA
AGAACCAGAGCAGGCAGAGGCTGGTAGCTATCATTCTGTTGGATTCTCAT
ATGGAAACCTAGATGAATTCACTTTGCAGAAGAATAATGATCCCGAGCCT
GTTTTCCACCCAGCCTTTCCAGTGCCAGATATCTTAAGTCAAAACCTTGT
AAGTATACCTCTCGTGTTTCTTATTTGTCAGTGTACAATTTCACATGACC
TGGATATTATTGTTTGTTTGATAGTTAACAAATGTGGCCAGATGATAATT
GCTAGGGTGCATGTGTTCTTCTAAGGCTTACCATGTCTAAGTTTCAGATA
CTCGGAGAAGGCATGCAGTTCTTGTGACACAAGGGGCTGTGCAGGTGGGA
TTAGGATTGTAGAAATTTATTGAATCTTTACTGCTTCTGACCAACTGGAA
GAAATATATCTTGTTCGAGTTATGTTTCTTGATCCTTATGGTTATCTGGT
ATATATGAGGTTCTGAGGGTTTATCTTGGGTTTATTATTATGCTACTTAC
TTCTTTTTCTCTGGATGTGATATCTGCATTTGTGGAATATCTCAGTGTGT
TGATTTTTTTCTTTCCTTCTGTTTTTCCCCTCAGCCTCCAACGGAAAAGG
TACATCAGATCATTGCAAGAACTGCTTTATTCGTTGCCAAGCATGGTGGG
CAGTCAGAAATTATTTTGAGGGTGAAACAGGGAGACAATCCTACGTTCGG
ATTCTTGATGCCTGACCATTACCTTCATGCGTACTTTAGGTTTCTCGTCA
ATCACCAAGAACTATTGGAGTGTGACTCTGATGGAAAGCCTCTACATGAA
GAGAAGAGAGCTGACAGTGGACTTGATCAGACAGGTGGTGCGTTATCTTT
GCTTGGTTCTGTATATGGTTCTGGAGAGGATGACGATGGTATAATTGAGG
ATGCACCTGAATTGAGAAAACTCAAGTCTGATGAAGCTATTAATTCTGCC
AGTGCATCCGTTCCTTGTGTATCAGAACACCTAGAATCTTCTGGAAATGT
AGCTGGGAAAACTGATATTGTTTCTACGAGTCCATGTATTCCCAAGAAAG
AGAAAGTTAATGTCATAAAACATAATCGCAGCATTACCACAGTTAAAGGT
GGAGCTATTAGTGGTATGAAGAAAGAAGATGGTGCCACAGGATCACTATC
TACTGCTGCCAATGACTCACAAGCTCCTGCTATGCCTAKCACATCCAAGG
TTGAACTACCCATTTTGGAGCCACCGGCTGATCAAAAGAGAGTGGTTGAT
AAAATAGTTGAGTTTATACTAAAAAATGGTAGAGAATTTGAAGCTATTTT
GATTGAGCAGAACTGTAAACAGGGAAGGTTTCTGTTCCTTCAGCCATCTA
ACCAGTATCATCCTTACTATTTAAAAGTTCTTCAAAAAGCCCAGGAGGTG
CGTATCTGCAGAACCTAGTAATGTCTTTAAAGATTTTGTGCTATTTGATT
GAGTATCTTTGTTAAGAATATAAGAGTTTTGGGTGCCTTTTTCTGCCTGT
TCTTAAATTGCCTTATGATGGTCCAATGTTTCACATTACTGATATTTATG
CCTGGCCCTTTCTCTGCAGTCCAAGGTATCTGGCAAGGGCTTGGTTCCTG
AGAAGCATGAGTCCGTGGGGCATGTAGTGGACAGTAAAGCTGCTGYGGAA
GGTGATAATGTCTCTTCAGAATCTGCTGGTCATGATTTGCCATTTGATTA
TGACAGGAAAGAGAAGTTTAAGATGGTAATCGGCAACTCAAAGGAGGGAA
ATGGTCCACCTCCCAAAGCTAACGAGGGTCAGTCTGGAGTCAGCCTGGAT
GCGGTTGCAGCTATTCTCCAGGCAGCCACAAGAGGCAATAAGAATCCAGG
TTTAGAGATGTTCCCAAAGTCATCAAGTGGTATAGGTCAACCTCCTACCA
GTGAGGGTGGGCAAAATTTGAGCTCCGGGAGTCTACATACATCTCAACTT
CGCACTTCCGTTCAAAAGGCAAATTATTGTGGGGAGTCTCACGTTGCCGT
CCCTGTTGCCAAGGCCATTGCTGAGACGGCTGCTCTTGCAGCTGCAAATG
AGGCAGACTCCTCAGAAGCATCCTTGACCAGAGAGCAGAAGTTGAAGGCG
GAGAGATTGAAACGAGCAAAGATGTTTGCAGCTATGATAAAAAGTGGATC
TGCACCATTGAAAAATGAATCATTGCGTGGCTTATCGGTTGAACCACCAG
AATCAGGGCTTTCCTCATCAGGTAATGTAAATCTTTCAGTCAAAGAAAGA
GAAGGCAGTTCAGTTCCATTAGAAGCTGATATTTCGGATAAGGTTGAGGA
GTTACAGAAGAAATTTTTTGCTGATGAATGTAATGAGCGGCGTTCAAAGA
GGAGCTACCGTTCTAAAAGGTATGAAGGAGAAGAACTTGACAATGATTTG
CAACAAGAGAAAGAGGAAGAAGATAAAAAGGGTCACAAGAACTCTAGGAA
GAAGCATCGGTCTCATCATTCTTCAGAACACAGTAGGGACAGGCATAAGC
ATAAAAGACGTCATAAGCATGACAGTTCTGATGACGAGAAGCATCGGCAC
TCACGGCGTAGGCATAAGAGAAATAGCTCTGATGATGAACATCAGCCTCA
AAAAAGGCGCAATCACGATCGCTCTGATGATGAGCATCGGAATTCTCGAC
GTAGTGATAGGCATAGTGACTCTTCTGAGGATGAGCACCAGCTTTATAGG
CGCCGGCACAAGCACAGCAACTCCTCTGAAGATGAACATCACCACCGCAG
CAGATCTGTAAAGCACAGGAAACCTGTGTCTGAAAAAGGAGCAGAGTTAG
AAGAAGGCGAGATCTACACAAAGTCAGATCAATCAAGAGCTAGTGAGGGT
GCTCATGCTAGTAGGGAAGCTTCCATTGATATTTTGGAATCACATCAAAA
CGGAAGAGCTTCATCGCAGACTTCGCAACCAACGGAGATTTCCGATGAAC
TTAGAGCTAAAATCCGTGCTATGTTGATGTCAACTTTGTAG

protein sequence of MDP0000206032

>MDP0000206032 ID=MDP0000206032; Name=MDP0000206032; organism=Malus x domestica; type=polypeptide; length=929bp
MDMEVVGRHALLFDDDNNASFVNSPDALVEWNSLFIDRYDVRHLLPNPMP
PRTRRRHLTRSSSSPPPYHDAALESELDQERYLDLPSPSEEQEQEQVCRM
GHSLQQLHLSETQLWVNLMCVRLILIIKSLCLDIGKEPEQAEAGSYHSVG
FSYGNLDEFTLQKNNDPEPVFHPAFPVPDILSQNLPPTEKVHQIIARTAL
FVAKHGGQSEIILRVKQGDNPTFGFLMPDHYLHAYFRFLVNHQELLECDS
DGKPLHEEKRADSGLDQTGGALSLLGSVYGSGEDDDGIIEDAPELRKLKS
DEAINSASASVPCVSEHLESSGNVAGKTDIVSTSPCIPKKEKVNVIKHNR
SITTVKGGAISGMKKEDGATGSLSTAANDSQAPAMPXTSKVELPILEPPA
DQKRVVDKIVEFILKNGREFEAILIEQNCKQGRFLFLQPSNQYHPYYLKV
LQKAQESKVSGKGLVPEKHESVGHVVDSKAAXEGDNVSSESAGHDLPFDY
DRKEKFKMVIGNSKEGNGPPPKANEGQSGVSLDAVAAILQAATRGNKNPG
LEMFPKSSSGIGQPPTSEGGQNLSSGSLHTSQLRTSVQKANYCGESHVAV
PVAKAIAETAALAAANEADSSEASLTREQKLKAERLKRAKMFAAMIKSGS
APLKNESLRGLSVEPPESGLSSSGNVNLSVKEREGSSVPLEADISDKVEE
LQKKFFADECNERRSKRSYRSKRYEGEELDNDLQQEKEEEDKKGHKNSRK
KHRSHHSSEHSRDRHKHKRRHKHDSSDDEKHRHSRRRHKRNSSDDEHQPQ
KRRNHDRSDDEHRNSRRSDRHSDSSEDEHQLYRRRHKHSNSSEDEHHHRS
RSVKHRKPVSEKGAELEEGEIYTKSDQSRASEGAHASREASIDILESHQN
GRASSQTSQPTEISDELRAKIRAMLMSTL

mRNA from alignment at chr11:22953305..22957845+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000206032 ID=MDP0000206032; Name=MDP0000206032; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr11:22953305..22957845+ (Malus x domestica

mRNA from alignment at MDC018668.117:4685..9225+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000206032 ID=MDP0000206032; Name=MDP0000206032; organism=Malus x domestica; type=mRNA; length=4541bp; location=Sequence derived from: MDC018668.117:4685..9225+ (Malus x domestica
ATGGACATGGAGGTGGTGGGCCGCCACGCGCTTCTCTTCGACGACGACAA
CAACGCCTCGTTCGTCAATTCACCCGACGCCCTCGTCGAGTGGAACTCGC
TCTTCATCGACCGCTACGATGTTCGCCACCTCCTCCCCAACCCTATGCCC
CCTCGCACGCGCCGGCGACATCTCACGCGCTCATCCTCTTCGCCGCCGCC
TTACCACGATGCCGCGCTCGAGTCGGAGCTCGATCAGGAGCGCTACCTCG
ATTTGCCGTCGCCGTCCGAAGAACAGGAACAAGAACAAGGTAAATTGTTA
ATCCCTCAGTTAAAATTTATTAAACTTTGTATTGAATATAGTATGATTTC
TGATAGATTTGGTATTCTGGATTTGTTACTATATATATATATATATATAT
ATATATATATTTGTTATTTGGTTTATGGGAAAATGAAAGAAAAGGAATTA
AAATTTAATGGTTAATGACCTTTCGTTTCAAAGGSATGTCAAATTAGCTG
AAGTGAAATTGTTGCGTGTTGTAGGCTTTAGTAGATTAAGGTTCCATATT
GTCGCCCTGATTTGTGCTTCACAAGGGTTTTATTAAAAGATTGAATGGAG
TAGGCTTTTATGTGTGTCCTGGTAATCTGGTTTTAACTCAAATTCAGGAA
TACCTACAAACTATTTGTTTGGGACATGAATACATGCAGATTGATCTGCC
TAAGAAGAGCAAAGAAAGGGTTGTTAAGTGGTGTAGGTTATGAGTGTTAA
ACATTTCATTATTTTGCAAACAATTACTAAACGGTGGAACAATGAATGGT
GATTGAATAAGTGTGGACTTTGTTTTAGGAAGAAGTATCAGTGTTTGAAA
ATGAGTGCAGAGTAAAATGGAGTTATGAAATTTTCAAAACTTAGGATTAA
AGGAAATGTAGATTTAGGTAGTGGTGTCTTTTGGGTTGGCTATCATTCAA
GGGTTTGGAGGTTAGTTTGTGGTCAGTTGTGTAGCCATTAGAGTACTGCA
CTGGATGTTTGTTTGATTCATGATATTTGTTGAAATGATCTGTTCGAGTA
GAACAAAGAGAACCTCTTCATTTGTACTGAAAATGGAGAGGGTTGGTTCT
TTAATAGAAAACTGTGGAATGCATAAACCCCCCAGAATTGGGAATATGAT
CCACTTGGACCTTAAGGCCTCGATACGATGGAACTCTTGTTTTTTATGGA
AGTTGGAATTGGGTCAGATCCTGAGGGTGTTCTTTTCGTTCCTTGTTTGC
TTGGGTTGGGGGGAGGGGRAAARGAGGGAGCAACAGTTCAAGACYATGAT
CGAGAGACGTGTTTGGTCTCTTCCTTCTATCAATGTTTTGTTTTTTGCAT
TATTTTTTCAGTTTGTAGGATGGGACATAGTTTGCAACAGTTGCATTTAT
CAGAGACACAAGTAAGAATATTCCTTTCTAACTGTAGTCTCTCTTTTATT
TATATTTTCCCTGCTTGGTATATTAATGACAGCTTTGGGTAAACTTGATG
TGTGTAAGATTGATTTTGATCATTAAATCTTTATGTCTTGATATAGGTAA
AGAACCAGAGCAGGCAGAGGCTGGTAGCTATCATTCTGTTGGATTCTCAT
ATGGAAACCTAGATGAATTCACTTTGCAGAAGAATAATGATCCCGAGCCT
GTTTTCCACCCAGCCTTTCCAGTGCCAGATATCTTAAGTCAAAACCTTGT
AAGTATACCTCTCGTGTTTCTTATTTGTCAGTGTACAATTTCACATGACC
TGGATATTATTGTTTGTTTGATAGTTAACAAATGTGGCCAGATGATAATT
GCTAGGGTGCATGTGTTCTTCTAAGGCTTACCATGTCTAAGTTTCAGATA
CTCGGAGAAGGCATGCAGTTCTTGTGACACAAGGGGCTGTGCAGGTGGGA
TTAGGATTGTAGAAATTTATTGAATCTTTACTGCTTCTGACCAACTGGAA
GAAATATATCTTGTTCGAGTTATGTTTCTTGATCCTTATGGTTATCTGGT
ATATATGAGGTTCTGAGGGTTTATCTTGGGTTTATTATTATGCTACTTAC
TTCTTTTTCTCTGGATGTGATATCTGCATTTGTGGAATATCTCAGTGTGT
TGATTTTTTTCTTTCCTTCTGTTTTTCCCCTCAGCCTCCAACGGAAAAGG
TACATCAGATCATTGCAAGAACTGCTTTATTCGTTGCCAAGCATGGTGGG
CAGTCAGAAATTATTTTGAGGGTGAAACAGGGAGACAATCCTACGTTCGG
ATTCTTGATGCCTGACCATTACCTTCATGCGTACTTTAGGTTTCTCGTCA
ATCACCAAGAACTATTGGAGTGTGACTCTGATGGAAAGCCTCTACATGAA
GAGAAGAGAGCTGACAGTGGACTTGATCAGACAGGTGGTGCGTTATCTTT
GCTTGGTTCTGTATATGGTTCTGGAGAGGATGACGATGGTATAATTGAGG
ATGCACCTGAATTGAGAAAACTCAAGTCTGATGAAGCTATTAATTCTGCC
AGTGCATCCGTTCCTTGTGTATCAGAACACCTAGAATCTTCTGGAAATGT
AGCTGGGAAAACTGATATTGTTTCTACGAGTCCATGTATTCCCAAGAAAG
AGAAAGTTAATGTCATAAAACATAATCGCAGCATTACCACAGTTAAAGGT
GGAGCTATTAGTGGTATGAAGAAAGAAGATGGTGCCACAGGATCACTATC
TACTGCTGCCAATGACTCACAAGCTCCTGCTATGCCTAKCACATCCAAGG
TTGAACTACCCATTTTGGAGCCACCGGCTGATCAAAAGAGAGTGGTTGAT
AAAATAGTTGAGTTTATACTAAAAAATGGTAGAGAATTTGAAGCTATTTT
GATTGAGCAGAACTGTAAACAGGGAAGGTTTCTGTTCCTTCAGCCATCTA
ACCAGTATCATCCTTACTATTTAAAAGTTCTTCAAAAAGCCCAGGAGGTG
CGTATCTGCAGAACCTAGTAATGTCTTTAAAGATTTTGTGCTATTTGATT
GAGTATCTTTGTTAAGAATATAAGAGTTTTGGGTGCCTTTTTCTGCCTGT
TCTTAAATTGCCTTATGATGGTCCAATGTTTCACATTACTGATATTTATG
CCTGGCCCTTTCTCTGCAGTCCAAGGTATCTGGCAAGGGCTTGGTTCCTG
AGAAGCATGAGTCCGTGGGGCATGTAGTGGACAGTAAAGCTGCTGYGGAA
GGTGATAATGTCTCTTCAGAATCTGCTGGTCATGATTTGCCATTTGATTA
TGACAGGAAAGAGAAGTTTAAGATGGTAATCGGCAACTCAAAGGAGGGAA
ATGGTCCACCTCCCAAAGCTAACGAGGGTCAGTCTGGAGTCAGCCTGGAT
GCGGTTGCAGCTATTCTCCAGGCAGCCACAAGAGGCAATAAGAATCCAGG
TTTAGAGATGTTCCCAAAGTCATCAAGTGGTATAGGTCAACCTCCTACCA
GTGAGGGTGGGCAAAATTTGAGCTCCGGGAGTCTACATACATCTCAACTT
CGCACTTCCGTTCAAAAGGCAAATTATTGTGGGGAGTCTCACGTTGCCGT
CCCTGTTGCCAAGGCCATTGCTGAGACGGCTGCTCTTGCAGCTGCAAATG
AGGCAGACTCCTCAGAAGCATCCTTGACCAGAGAGCAGAAGTTGAAGGCG
GAGAGATTGAAACGAGCAAAGATGTTTGCAGCTATGATAAAAAGTGGATC
TGCACCATTGAAAAATGAATCATTGCGTGGCTTATCGGTTGAACCACCAG
AATCAGGGCTTTCCTCATCAGGTAATGTAAATCTTTCAGTCAAAGAAAGA
GAAGGCAGTTCAGTTCCATTAGAAGCTGATATTTCGGATAAGGTTGAGGA
GTTACAGAAGAAATTTTTTGCTGATGAATGTAATGAGCGGCGTTCAAAGA
GGAGCTACCGTTCTAAAAGGTATGAAGGAGAAGAACTTGACAATGATTTG
CAACAAGAGAAAGAGGAAGAAGATAAAAAGGGTCACAAGAACTCTAGGAA
GAAGCATCGGTCTCATCATTCTTCAGAACACAGTAGGGACAGGCATAAGC
ATAAAAGACGTCATAAGCATGACAGTTCTGATGACGAGAAGCATCGGCAC
TCACGGCGTAGGCATAAGAGAAATAGCTCTGATGATGAACATCAGCCTCA
AAAAAGGCGCAATCACGATCGCTCTGATGATGAGCATCGGAATTCTCGAC
GTAGTGATAGGCATAGTGACTCTTCTGAGGATGAGCACCAGCTTTATAGG
CGCCGGCACAAGCACAGCAACTCCTCTGAAGATGAACATCACCACCGCAG
CAGATCTGTAAAGCACAGGAAACCTGTGTCTGAAAAAGGAGCAGAGTTAG
AAGAAGGCGAGATCTACACAAAGTCAGATCAATCAAGAGCTAGTGAGGGT
GCTCATGCTAGTAGGGAAGCTTCCATTGATATTTTGGAATCACATCAAAA
CGGAAGAGCTTCATCGCAGACTTCGCAACCAACGGAGATTTCCGATGAAC
TTAGAGCTAAAATCCGTGCTATGTTGATGTCAACTTTGTAG

Coding sequence (CDS) from alignment at MDC018668.117:4685..9225+

>MDP0000206032 ID=MDP0000206032; Name=MDP0000206032; organism=Malus x domestica; type=CDS; length=2790bp; location=Sequence derived from: MDC018668.117:4685..9225+ (Malus x domestica
ATGGACATGGAGGTGGTGGGCCGCCACGCGCTTCTCTTCGACGACGACAA
CAACGCCTCGTTCGTCAATTCACCCGACGCCCTCGTCGAGTGGAACTCGC
TCTTCATCGACCGCTACGATGTTCGCCACCTCCTCCCCAACCCTATGCCC
CCTCGCACGCGCCGGCGACATCTCACGCGCTCATCCTCTTCGCCGCCGCC
TTACCACGATGCCGCGCTCGAGTCGGAGCTCGATCAGGAGCGCTACCTCG
ATTTGCCGTCGCCGTCCGAAGAACAGGAACAAGAACAAGTTTGTAGGATG
GGACATAGTTTGCAACAGTTGCATTTATCAGAGACACAACTTTGGGTAAA
CTTGATGTGTGTAAGATTGATTTTGATCATTAAATCTTTATGTCTTGATA
TAGGTAAAGAACCAGAGCAGGCAGAGGCTGGTAGCTATCATTCTGTTGGA
TTCTCATATGGAAACCTAGATGAATTCACTTTGCAGAAGAATAATGATCC
CGAGCCTGTTTTCCACCCAGCCTTTCCAGTGCCAGATATCTTAAGTCAAA
ACCTTCCTCCAACGGAAAAGGTACATCAGATCATTGCAAGAACTGCTTTA
TTCGTTGCCAAGCATGGTGGGCAGTCAGAAATTATTTTGAGGGTGAAACA
GGGAGACAATCCTACGTTCGGATTCTTGATGCCTGACCATTACCTTCATG
CGTACTTTAGGTTTCTCGTCAATCACCAAGAACTATTGGAGTGTGACTCT
GATGGAAAGCCTCTACATGAAGAGAAGAGAGCTGACAGTGGACTTGATCA
GACAGGTGGTGCGTTATCTTTGCTTGGTTCTGTATATGGTTCTGGAGAGG
ATGACGATGGTATAATTGAGGATGCACCTGAATTGAGAAAACTCAAGTCT
GATGAAGCTATTAATTCTGCCAGTGCATCCGTTCCTTGTGTATCAGAACA
CCTAGAATCTTCTGGAAATGTAGCTGGGAAAACTGATATTGTTTCTACGA
GTCCATGTATTCCCAAGAAAGAGAAAGTTAATGTCATAAAACATAATCGC
AGCATTACCACAGTTAAAGGTGGAGCTATTAGTGGTATGAAGAAAGAAGA
TGGTGCCACAGGATCACTATCTACTGCTGCCAATGACTCACAAGCTCCTG
CTATGCCTAKCACATCCAAGGTTGAACTACCCATTTTGGAGCCACCGGCT
GATCAAAAGAGAGTGGTTGATAAAATAGTTGAGTTTATACTAAAAAATGG
TAGAGAATTTGAAGCTATTTTGATTGAGCAGAACTGTAAACAGGGAAGGT
TTCTGTTCCTTCAGCCATCTAACCAGTATCATCCTTACTATTTAAAAGTT
CTTCAAAAAGCCCAGGAGTCCAAGGTATCTGGCAAGGGCTTGGTTCCTGA
GAAGCATGAGTCCGTGGGGCATGTAGTGGACAGTAAAGCTGCTGYGGAAG
GTGATAATGTCTCTTCAGAATCTGCTGGTCATGATTTGCCATTTGATTAT
GACAGGAAAGAGAAGTTTAAGATGGTAATCGGCAACTCAAAGGAGGGAAA
TGGTCCACCTCCCAAAGCTAACGAGGGTCAGTCTGGAGTCAGCCTGGATG
CGGTTGCAGCTATTCTCCAGGCAGCCACAAGAGGCAATAAGAATCCAGGT
TTAGAGATGTTCCCAAAGTCATCAAGTGGTATAGGTCAACCTCCTACCAG
TGAGGGTGGGCAAAATTTGAGCTCCGGGAGTCTACATACATCTCAACTTC
GCACTTCCGTTCAAAAGGCAAATTATTGTGGGGAGTCTCACGTTGCCGTC
CCTGTTGCCAAGGCCATTGCTGAGACGGCTGCTCTTGCAGCTGCAAATGA
GGCAGACTCCTCAGAAGCATCCTTGACCAGAGAGCAGAAGTTGAAGGCGG
AGAGATTGAAACGAGCAAAGATGTTTGCAGCTATGATAAAAAGTGGATCT
GCACCATTGAAAAATGAATCATTGCGTGGCTTATCGGTTGAACCACCAGA
ATCAGGGCTTTCCTCATCAGGTAATGTAAATCTTTCAGTCAAAGAAAGAG
AAGGCAGTTCAGTTCCATTAGAAGCTGATATTTCGGATAAGGTTGAGGAG
TTACAGAAGAAATTTTTTGCTGATGAATGTAATGAGCGGCGTTCAAAGAG
GAGCTACCGTTCTAAAAGGTATGAAGGAGAAGAACTTGACAATGATTTGC
AACAAGAGAAAGAGGAAGAAGATAAAAAGGGTCACAAGAACTCTAGGAAG
AAGCATCGGTCTCATCATTCTTCAGAACACAGTAGGGACAGGCATAAGCA
TAAAAGACGTCATAAGCATGACAGTTCTGATGACGAGAAGCATCGGCACT
CACGGCGTAGGCATAAGAGAAATAGCTCTGATGATGAACATCAGCCTCAA
AAAAGGCGCAATCACGATCGCTCTGATGATGAGCATCGGAATTCTCGACG
TAGTGATAGGCATAGTGACTCTTCTGAGGATGAGCACCAGCTTTATAGGC
GCCGGCACAAGCACAGCAACTCCTCTGAAGATGAACATCACCACCGCAGC
AGATCTGTAAAGCACAGGAAACCTGTGTCTGAAAAAGGAGCAGAGTTAGA
AGAAGGCGAGATCTACACAAAGTCAGATCAATCAAGAGCTAGTGAGGGTG
CTCATGCTAGTAGGGAAGCTTCCATTGATATTTTGGAATCACATCAAAAC
GGAAGAGCTTCATCGCAGACTTCGCAACCAACGGAGATTTCCGATGAACT
TAGAGCTAAAATCCGTGCTATGTTGATGTCAACTTTGTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000061	Surp
IPR019147	SWAP_N_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing