MDP0000244749, MDP0000244749 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000244749
Unique Name	MDP0000244749
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	4691

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr10	chromosome	chr10:3617745..3622435 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC019661.284	contig	MDC019661.284:4980..9670 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000244749_exon_1	MDP0000244749_exon_1	Malus x domestica	CDS
MDP0000244749_exon_2	MDP0000244749_exon_2	Malus x domestica	CDS
MDP0000244749_exon_3	MDP0000244749_exon_3	Malus x domestica	CDS
MDP0000244749_exon_4	MDP0000244749_exon_4	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000244749	MDP0000244749	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005067	Fatty acid desaturase, type 2	PFAM	PF03405	FA_desaturase_2	coord: 74..163 score: 2.4
IPR006041	Pollen Ole e 1 allergen/extensin	PFAM	PF01190	Pollen_Ole_e_I	coord: 202..269 score: 1.1
IPR009078	Ferritin/ribonucleotide reductase-like	SUPERFAMILY	47240	Ferritin-like	coord: 73..168 score: 6.4
IPR012348	Ribonucleotide reductase-related	GENE3D	1.10.620.20	no description	coord: 73..160 score: 1.6
None	No IPR available	SEG	seg	seg	coord: 58..75 score
None	No IPR available	SEG	seg	seg	coord: 57..65 score
None	No IPR available	SEG	seg	seg	coord: 9..24 score
None	No IPR available	SEG	seg	seg	coord: 37..47 score
None	No IPR available	SEG	seg	seg	coord: 18..33 score: NAcoord: 38..47 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:3617745..3622435+
mRNA from alignment at MDC019661.284:4980..9670+
coding sequence from alignment at MDC019661.284:4980..9670+

mRNA sequence

>MDP0000244749 ID=MDP0000244749; Name=MDP0000244749; organism=Malus x domestica; type=mRNA; length=4691bp
ATGGATTTCGGGTTACTGGCKAAACAGTATTTCTCGTACTGTCAATCGTT
TCATTTTTTTTTTTACGAAGCTTTTGCAGGTAATTGTTTGATTGTCAAAG
CAATTATTGTCGAGACTTTTAATAAACACAWTTTCGTATAGGAGGTGAAT
TTTGTGCCTCTCATTTTCATATTTTCCTCATCCTTTTCTGTTTATGTGAT
CATGGTTAAACTATGTTAACATTTTATATTTCTATTACTTTTTGTTTTAT
TATTTCTATAAAAAATTAATATAAAATATTGTTATGACTTAACAGTGACC
ACACATCACAGAAAGACACGAGAAGAGTATGAAAATGGGAAGGTAGACAA
TCCACCTCCTTTGGTATAAACATAATTATTGGATGCAGGTACAAATGGTG
CAGGATTGCAGGGACTTTGATCTAGAAAATCCTAAAAGAAAGGTTAGAAT
ATGGTTGGTTGTATTATTTATAGAGAATTGTTATTAGCAAAATCTCATTT
AATATTTTAAACTTTCTATAATTAAAAAGAAAAATATATTTCTGAGGAGT
ATATAATGAGATTTTTAGAGTATTAATAACAATTCCCTATTTATATTATG
ATTACAATTAGAGAACCTGTTATAAAATATGCAAATACACTTGTGTCTCT
CTTTATGGACACGCACACACACATCCCTGCACACTTTGACACATACATTT
AATTGATTGGCCTAATCGGATAAATGGTCATCGTGGTAATGAGGCAATCG
AAAGATATCCCCTGTAGCAAAAAAATTAGAATTTAAACWYTYGTGGTATA
ATCTGTTAGCAAATTTAGTCCAWAACTAATTTTTCTATTAATTGTCCGTT
AAATGCAGGGATCAATGTCCTCAGGATCCAGGTACTGGGTCCAGTYGTTT
CGTCTTCTCTTTTCAATCTTGTACGAGCAATCAGAAAAAATAAGAGTATC
TTGTTCTTGTCRCTCTTGTTGTTGCTATTGATCATGGGCTTGCTGGACGA
ACTAGCGAGACATGTTGGAGGACTGGACAAAGAGGCGGAGGTCTCCAACC
ACTGGACCTTGAGCAAACACTTGGCGGACGAACTGCTTCTGATTGCAGAC
GACGCATGTCCAYTTGTTGCTTTTGTTCCTTTGCTTCACCTGCAAATTTA
ATCAGTATTCATCGCCAAACAAAATCATCAAGTTTCAGATTCAAGTGTTT
GTACACACACACGCATGTACATACCTGCWTGGTGGAGTTGCCATGTACAT
ACCTGCATGGTGGAGCATTGGCAGCACTGAACTGCGATGAACACAGTCGG
CATTTTCTTCTCTGCTTTCGGATTTCACAAGTCGATGTGGGATTTTGGTA
TTACTGAAAATTTAGGCGGCGATTTGATTTGGGGTTTGGGCGCCAAATTT
TGGGGATTCAAAATTTTGTGATTAAAAATCCTAAAAAGCCCAAATTCGCA
ATGATCCAGCGGCAAAGTGGCCATTTTAGAAAAGCACAGCTAGATCTTCC
TCCTTTACCATCGCTTACTCCCCCAACAAAATCAAAACCCGGCTAGACGA
GGAAACGCAGAGAGACAAGGAAGAAGAACACGTAAAAAGTACATTTTTAT
CCCACCTTTAACGGACAACTAACGGAAAAATCACTTGTGGACTAAATTTG
CTAACGGACTACACCACGAGGGTTTAAATCCTAATTTTTTTTTACCACGA
GGGCTATCTTCCGATAAACTTATCACCACAAGGACCATCTATCCGATTAG
GCCTAAATAATTTCATGTTCTTGGGGTGGGCTTTATGTATTTTTGTGTTA
TGTCTCTCCTTAAAATGTTTAAAATTAATGGAGTTCCTTAAAATATAGTG
TATATTTTTGTCACCATTCATGTGAGTTTATAGTTACTTGTAAGAAAAAT
GACTCAATGTATCAAAGGTTTGATAGAATCACAATGGAAAGCAACGAACC
CTCCCCTTGACATTATTCCCTCTTCAAATCATGTCGACATTATGTTGTAA
TAAACTAATTCTACTAAAAATATATAAATTGATTCTACWAGAAAAGTATA
CAAAACTAATTCCACATGTATTTGGAACTGCKGCAAAAATGGTCGAAGAC
GGGTTAAATTGATTTTGCAAAAAAAAAGGTCAAAGACGGGTTAAATTGAT
TTTGCAAAAAAATGGTTGAAGACGGGTTGAACTAATTATGCAAAAATAGT
CGAGGCARGTTGAAYTGATTGTGCAAAAAAGGTCGAAGAAGGTAACTGAT
TTTGCAAAAAAAGGTCGAAGACGAGTTAAACTRATTCTRAAAAAATTGTC
GAAGACGGGTTGAACTGATTCTGTAAAAATAGTCGAAGACTGATTGAACT
AATTCTACAAAAATGGTTAAAGACGGGATAAACTTTTGCAAAAATGGCCG
AATATGGTTAAACTGATTTTGAAAAAATGGTTGAAGACTGATTGAACTGA
TTATGAAAAAATGGTCGAAGACAAGTTGAACTGATTYTGAAAAATGGTCG
ATGATTGATTRAACTGATTTTSCAAAAATGGTCRAAGACAGATTGAACTG
ATTCTGTAAAAATAATCGAAGAAGGGTTRAACTGATTCTACAAAAATGGT
CAAAGACGRGTTGAATTGAATCTGYAAAAATAGTCTAGGACGAGTTGAAT
TGATTCTGTAGAAATAGTCGAGGATGAGTTGAGCTTATGACATATATTAA
TTTTGTTAGAGTYGTGAGAGCTGGGTTCTATCAATAGCCCTAAAGCTTTA
GGGGTATAGTTAGTATTTTAAAACATTGTTTCCATATTTTTGGGCTGYAC
TTTAGTTGTTTTTATGTTTTTGTCTCTTCKTAACATATTTAAAAACTTGT
TTGTACCATACTTAGGGCCTCCGTTTTTAGACCTCGTATAAATACTCGAA
GGACTCAAGTGTAATTATATAATAAATGAAGGGGCAAATATGTAATAAGT
GAGGAGCCCTTAATCTATAAAAGGGACTCCTCACCCTCACAATCGGGGAG
CCTGACTTCCCCAAACAGAGGCTCTCATATTCAGAGCTCTTATCCTCATA
GAGAAGCTCTCTCAAACCCTTTGTTTCTCTGGGGGACTCTCCCTCACGCT
TGTAATCCGTACATTCATATAGAGAAATACAATCAACATCAGTGTGGACG
TAGCCCAAACATTGGGGTGAACCACGATACATCTTGTGTTCTTTACTTTC
TTGCAGATTCACAGTCGGATTTACGTTGTTCCAAGACCCCTCCGGTTTTA
TGCATCAACATTTGGCATCGTCCGTGGGAAACGACACAAAAAGCTATGTC
GGTTATCTTTCATTTTTTCATCTCACCACCATGAAACCTTCACAACCTCA
CCACTGTCCACCGTGGATATGCAAAACCCAAGAAACACCGGTCACCCCCT
TCTGAAAATTCTCCCTCATCATCATCTCTCTCCATCAACCTTTTCAACAA
CCCTTATCCTCTTCCAGATCCTCATCATCACCAAGTCTAGATTTTACCTG
ACATTGATTGGATCAACGTCCTCTCTGGTGATCAACCTGCAGGTGACCTA
CTTTCTACTCACAATAATCATGATCAAGCGGGCGATCGTGCAGAAGAAAT
AAGGGGTTTGAATAGAAGGAAAGGCAGTGCAAAAGAAACAAATTCGAGCC
ATGTAGACCTCGTTCTACATTGACACCAAAACTCTTGCATGACCTTCACG
TGGCCACAGCTTCCCCGCCACCTTTAACTGGGCAGAAGGCCCACTCACTG
CCGCTTGAAAAAAGCTGAGTTGTTCAAGTCACTAGAAGGCTGGGCCGAGC
AACACGTCCTCTCATTCCTAAAATCGGTGGATCAGTTCTGACAGCCTAAC
ACCTTCTTGACCGACTCATCACTTCCGGAAGAAAAGTTTCTAGGTCAGGT
TCGAACCTTCTGTGATCGAACCAGCGAGCTCCCTGATGAGTACTTTGTGG
CGCTCGTGGGGGACATGATTACTGAGGACGTGTTGCTCACTTATCAAAAC
ATGGTAAATGGGCTAGCCGAAGTGAAAGATGAGACTGGTTCTAGTCCGAG
CACGTGGGCTCAATGCTACAAATCTCACTACTGGGCACTCATGGAGGAGC
TCTGGATTGGGTATAGGGAGCACTGGTGGAACTATGGTGTTAGCCTTTGC
AAGGAAGAGCACAGGAGCGAGAGAGACGCTGTTGGGATGCTGAAGGCACT
GATGAAAACAAAAACCCAAAAGCAGAAAAGCTCCAAATCTCTCTCATCAC
CCCCTCTCTCTTTTCATATATCTCGCTCATCAGCATTTCGTTTCTTCAAT
TTTCTTCTCTCTCAAATTTCTCTACTAGAATGAAGTGAAAAGACTGAAAA
AGGCTTCAATGGAGAAATTGGTTCTGCTAATTGCTCTGTGAGTGTTGCCG
GCTCTGACTGTCGCCACGCGTCCCATGAAGACCCCGTTCACAGTAGAGGG
GAAAGTCTACTGCGACACTTGCCACGCTGGGTCCGAGACCAAAGCCATCA
CCTACATTGCCGGTGCCAAGGTTAGACTGGAATGCAAAGACAAAAGCAGC
ATGGCACTCATGTACACCAAAGAAGGGACAACCGACTCAGCAAGTTGCCA
TAAGATCCCGGTCCCAGAGGACCATTTGGACCAGTTCTGTGATGCAGATA
CAAGCTGCTACTGTTTTAGTTTCTCTCTGCAAGGAGAATGA

protein sequence of MDP0000244749

>MDP0000244749 ID=MDP0000244749; Name=MDP0000244749; organism=Malus x domestica; type=polypeptide; length=283bp
MDFGLLAKQYFSYCQSFHFFFYEAFAGINVLRIQVLGPVVSSSLFNLVRA
IRKNKSILFLSLLLLLLIMGLLDELARHVGGLDKEAEPNTFLTDSSLPEE
KFLGQVRTFCDRTSELPDEYFVALVGDMITEDVLLTYQNMVNGLAEVKDE
TGSSPSTWAQCYKSHYWALMEELWIGYREHWWNYVLPALTVATRPMKTPF
TVEGKVYCDTCHAGSETKAITYIAGAKVRLECKDKSSMALMYTKEGTTDS
ASCHKIPVPEDHLDQFCDADTSCYCFSFSLQGE

mRNA from alignment at chr10:3617745..3622435+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000244749 ID=MDP0000244749; Name=MDP0000244749; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr10:3617745..3622435+ (Malus x domestica

mRNA from alignment at MDC019661.284:4980..9670+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000244749 ID=MDP0000244749; Name=MDP0000244749; organism=Malus x domestica; type=mRNA; length=4691bp; location=Sequence derived from: MDC019661.284:4980..9670+ (Malus x domestica
ATGGATTTCGGGTTACTGGCKAAACAGTATTTCTCGTACTGTCAATCGTT
TCATTTTTTTTTTTACGAAGCTTTTGCAGGTAATTGTTTGATTGTCAAAG
CAATTATTGTCGAGACTTTTAATAAACACAWTTTCGTATAGGAGGTGAAT
TTTGTGCCTCTCATTTTCATATTTTCCTCATCCTTTTCTGTTTATGTGAT
CATGGTTAAACTATGTTAACATTTTATATTTCTATTACTTTTTGTTTTAT
TATTTCTATAAAAAATTAATATAAAATATTGTTATGACTTAACAGTGACC
ACACATCACAGAAAGACACGAGAAGAGTATGAAAATGGGAAGGTAGACAA
TCCACCTCCTTTGGTATAAACATAATTATTGGATGCAGGTACAAATGGTG
CAGGATTGCAGGGACTTTGATCTAGAAAATCCTAAAAGAAAGGTTAGAAT
ATGGTTGGTTGTATTATTTATAGAGAATTGTTATTAGCAAAATCTCATTT
AATATTTTAAACTTTCTATAATTAAAAAGAAAAATATATTTCTGAGGAGT
ATATAATGAGATTTTTAGAGTATTAATAACAATTCCCTATTTATATTATG
ATTACAATTAGAGAACCTGTTATAAAATATGCAAATACACTTGTGTCTCT
CTTTATGGACACGCACACACACATCCCTGCACACTTTGACACATACATTT
AATTGATTGGCCTAATCGGATAAATGGTCATCGTGGTAATGAGGCAATCG
AAAGATATCCCCTGTAGCAAAAAAATTAGAATTTAAACWYTYGTGGTATA
ATCTGTTAGCAAATTTAGTCCAWAACTAATTTTTCTATTAATTGTCCGTT
AAATGCAGGGATCAATGTCCTCAGGATCCAGGTACTGGGTCCAGTYGTTT
CGTCTTCTCTTTTCAATCTTGTACGAGCAATCAGAAAAAATAAGAGTATC
TTGTTCTTGTCRCTCTTGTTGTTGCTATTGATCATGGGCTTGCTGGACGA
ACTAGCGAGACATGTTGGAGGACTGGACAAAGAGGCGGAGGTCTCCAACC
ACTGGACCTTGAGCAAACACTTGGCGGACGAACTGCTTCTGATTGCAGAC
GACGCATGTCCAYTTGTTGCTTTTGTTCCTTTGCTTCACCTGCAAATTTA
ATCAGTATTCATCGCCAAACAAAATCATCAAGTTTCAGATTCAAGTGTTT
GTACACACACACGCATGTACATACCTGCWTGGTGGAGTTGCCATGTACAT
ACCTGCATGGTGGAGCATTGGCAGCACTGAACTGCGATGAACACAGTCGG
CATTTTCTTCTCTGCTTTCGGATTTCACAAGTCGATGTGGGATTTTGGTA
TTACTGAAAATTTAGGCGGCGATTTGATTTGGGGTTTGGGCGCCAAATTT
TGGGGATTCAAAATTTTGTGATTAAAAATCCTAAAAAGCCCAAATTCGCA
ATGATCCAGCGGCAAAGTGGCCATTTTAGAAAAGCACAGCTAGATCTTCC
TCCTTTACCATCGCTTACTCCCCCAACAAAATCAAAACCCGGCTAGACGA
GGAAACGCAGAGAGACAAGGAAGAAGAACACGTAAAAAGTACATTTTTAT
CCCACCTTTAACGGACAACTAACGGAAAAATCACTTGTGGACTAAATTTG
CTAACGGACTACACCACGAGGGTTTAAATCCTAATTTTTTTTTACCACGA
GGGCTATCTTCCGATAAACTTATCACCACAAGGACCATCTATCCGATTAG
GCCTAAATAATTTCATGTTCTTGGGGTGGGCTTTATGTATTTTTGTGTTA
TGTCTCTCCTTAAAATGTTTAAAATTAATGGAGTTCCTTAAAATATAGTG
TATATTTTTGTCACCATTCATGTGAGTTTATAGTTACTTGTAAGAAAAAT
GACTCAATGTATCAAAGGTTTGATAGAATCACAATGGAAAGCAACGAACC
CTCCCCTTGACATTATTCCCTCTTCAAATCATGTCGACATTATGTTGTAA
TAAACTAATTCTACTAAAAATATATAAATTGATTCTACWAGAAAAGTATA
CAAAACTAATTCCACATGTATTTGGAACTGCKGCAAAAATGGTCGAAGAC
GGGTTAAATTGATTTTGCAAAAAAAAAGGTCAAAGACGGGTTAAATTGAT
TTTGCAAAAAAATGGTTGAAGACGGGTTGAACTAATTATGCAAAAATAGT
CGAGGCARGTTGAAYTGATTGTGCAAAAAAGGTCGAAGAAGGTAACTGAT
TTTGCAAAAAAAGGTCGAAGACGAGTTAAACTRATTCTRAAAAAATTGTC
GAAGACGGGTTGAACTGATTCTGTAAAAATAGTCGAAGACTGATTGAACT
AATTCTACAAAAATGGTTAAAGACGGGATAAACTTTTGCAAAAATGGCCG
AATATGGTTAAACTGATTTTGAAAAAATGGTTGAAGACTGATTGAACTGA
TTATGAAAAAATGGTCGAAGACAAGTTGAACTGATTYTGAAAAATGGTCG
ATGATTGATTRAACTGATTTTSCAAAAATGGTCRAAGACAGATTGAACTG
ATTCTGTAAAAATAATCGAAGAAGGGTTRAACTGATTCTACAAAAATGGT
CAAAGACGRGTTGAATTGAATCTGYAAAAATAGTCTAGGACGAGTTGAAT
TGATTCTGTAGAAATAGTCGAGGATGAGTTGAGCTTATGACATATATTAA
TTTTGTTAGAGTYGTGAGAGCTGGGTTCTATCAATAGCCCTAAAGCTTTA
GGGGTATAGTTAGTATTTTAAAACATTGTTTCCATATTTTTGGGCTGYAC
TTTAGTTGTTTTTATGTTTTTGTCTCTTCKTAACATATTTAAAAACTTGT
TTGTACCATACTTAGGGCCTCCGTTTTTAGACCTCGTATAAATACTCGAA
GGACTCAAGTGTAATTATATAATAAATGAAGGGGCAAATATGTAATAAGT
GAGGAGCCCTTAATCTATAAAAGGGACTCCTCACCCTCACAATCGGGGAG
CCTGACTTCCCCAAACAGAGGCTCTCATATTCAGAGCTCTTATCCTCATA
GAGAAGCTCTCTCAAACCCTTTGTTTCTCTGGGGGACTCTCCCTCACGCT
TGTAATCCGTACATTCATATAGAGAAATACAATCAACATCAGTGTGGACG
TAGCCCAAACATTGGGGTGAACCACGATACATCTTGTGTTCTTTACTTTC
TTGCAGATTCACAGTCGGATTTACGTTGTTCCAAGACCCCTCCGGTTTTA
TGCATCAACATTTGGCATCGTCCGTGGGAAACGACACAAAAAGCTATGTC
GGTTATCTTTCATTTTTTCATCTCACCACCATGAAACCTTCACAACCTCA
CCACTGTCCACCGTGGATATGCAAAACCCAAGAAACACCGGTCACCCCCT
TCTGAAAATTCTCCCTCATCATCATCTCTCTCCATCAACCTTTTCAACAA
CCCTTATCCTCTTCCAGATCCTCATCATCACCAAGTCTAGATTTTACCTG
ACATTGATTGGATCAACGTCCTCTCTGGTGATCAACCTGCAGGTGACCTA
CTTTCTACTCACAATAATCATGATCAAGCGGGCGATCGTGCAGAAGAAAT
AAGGGGTTTGAATAGAAGGAAAGGCAGTGCAAAAGAAACAAATTCGAGCC
ATGTAGACCTCGTTCTACATTGACACCAAAACTCTTGCATGACCTTCACG
TGGCCACAGCTTCCCCGCCACCTTTAACTGGGCAGAAGGCCCACTCACTG
CCGCTTGAAAAAAGCTGAGTTGTTCAAGTCACTAGAAGGCTGGGCCGAGC
AACACGTCCTCTCATTCCTAAAATCGGTGGATCAGTTCTGACAGCCTAAC
ACCTTCTTGACCGACTCATCACTTCCGGAAGAAAAGTTTCTAGGTCAGGT
TCGAACCTTCTGTGATCGAACCAGCGAGCTCCCTGATGAGTACTTTGTGG
CGCTCGTGGGGGACATGATTACTGAGGACGTGTTGCTCACTTATCAAAAC
ATGGTAAATGGGCTAGCCGAAGTGAAAGATGAGACTGGTTCTAGTCCGAG
CACGTGGGCTCAATGCTACAAATCTCACTACTGGGCACTCATGGAGGAGC
TCTGGATTGGGTATAGGGAGCACTGGTGGAACTATGGTGTTAGCCTTTGC
AAGGAAGAGCACAGGAGCGAGAGAGACGCTGTTGGGATGCTGAAGGCACT
GATGAAAACAAAAACCCAAAAGCAGAAAAGCTCCAAATCTCTCTCATCAC
CCCCTCTCTCTTTTCATATATCTCGCTCATCAGCATTTCGTTTCTTCAAT
TTTCTTCTCTCTCAAATTTCTCTACTAGAATGAAGTGAAAAGACTGAAAA
AGGCTTCAATGGAGAAATTGGTTCTGCTAATTGCTCTGTGAGTGTTGCCG
GCTCTGACTGTCGCCACGCGTCCCATGAAGACCCCGTTCACAGTAGAGGG
GAAAGTCTACTGCGACACTTGCCACGCTGGGTCCGAGACCAAAGCCATCA
CCTACATTGCCGGTGCCAAGGTTAGACTGGAATGCAAAGACAAAAGCAGC
ATGGCACTCATGTACACCAAAGAAGGGACAACCGACTCAGCAAGTTGCCA
TAAGATCCCGGTCCCAGAGGACCATTTGGACCAGTTCTGTGATGCAGATA
CAAGCTGCTACTGTTTTAGTTTCTCTCTGCAAGGAGAATGA

Coding sequence (CDS) from alignment at MDC019661.284:4980..9670+

>MDP0000244749 ID=MDP0000244749; Name=MDP0000244749; organism=Malus x domestica; type=CDS; length=852bp; location=Sequence derived from: MDC019661.284:4980..9670+ (Malus x domestica
ATGGATTTCGGGTTACTGGCKAAACAGTATTTCTCGTACTGTCAATCGTT
TCATTTTTTTTTTTACGAAGCTTTTGCAGGGATCAATGTCCTCAGGATCC
AGGTACTGGGTCCAGTYGTTTCGTCTTCTCTTTTCAATCTTGTACGAGCA
ATCAGAAAAAATAAGAGTATCTTGTTCTTGTCRCTCTTGTTGTTGCTATT
GATCATGGGCTTGCTGGACGAACTAGCGAGACATGTTGGAGGACTGGACA
AAGAGGCGGAGCCTAACACCTTCTTGACCGACTCATCACTTCCGGAAGAA
AAGTTTCTAGGTCAGGTTCGAACCTTCTGTGATCGAACCAGCGAGCTCCC
TGATGAGTACTTTGTGGCGCTCGTGGGGGACATGATTACTGAGGACGTGT
TGCTCACTTATCAAAACATGGTAAATGGGCTAGCCGAAGTGAAAGATGAG
ACTGGTTCTAGTCCGAGCACGTGGGCTCAATGCTACAAATCTCACTACTG
GGCACTCATGGAGGAGCTCTGGATTGGGTATAGGGAGCACTGGTGGAACT
ATGTGTTGCCGGCTCTGACTGTCGCCACGCGTCCCATGAAGACCCCGTTC
ACAGTAGAGGGGAAAGTCTACTGCGACACTTGCCACGCTGGGTCCGAGAC
CAAAGCCATCACCTACATTGCCGGTGCCAAGGTTAGACTGGAATGCAAAG
ACAAAAGCAGCATGGCACTCATGTACACCAAAGAAGGGACAACCGACTCA
GCAAGTTGCCATAAGATCCCGGTCCCAGAGGACCATTTGGACCAGTTCTG
TGATGCAGATACAAGCTGCTACTGTTTTAGTTTCTCTCTGCAAGGAGAAT
GA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005067	Fatty_acid_desaturase-2
IPR006041	Pollen_Ole_e1_allergen
IPR009078	Ferritin-like_SF
IPR012348	RNR-like

Vocabulary: **Biological Process**
Term	Definition
GO:0006631	fatty acid metabolic process
GO:0055114	obsolete oxidation-reduction process

Vocabulary: **Molecular Function**
Term	Definition
GO:0045300	stearoyl-[ACP] desaturase activity
GO:0016491	oxidoreductase activity
GO:0046914	transition metal ion binding