MDP0000245412, MDP0000245412 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000245412
Unique Name	MDP0000245412
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	7161

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr16	chromosome	chr16:19051415..19058575 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC021284.110	contig	MDC021284.110:1996..9156 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000245412_exon_1	MDP0000245412_exon_1	Malus x domestica	CDS
MDP0000245412_exon_2	MDP0000245412_exon_2	Malus x domestica	CDS
MDP0000245412_exon_3	MDP0000245412_exon_3	Malus x domestica	CDS
MDP0000245412_exon_4	MDP0000245412_exon_4	Malus x domestica	CDS
MDP0000245412_exon_5	MDP0000245412_exon_5	Malus x domestica	CDS
MDP0000245412_exon_6	MDP0000245412_exon_6	Malus x domestica	CDS
MDP0000245412_exon_7	MDP0000245412_exon_7	Malus x domestica	CDS
MDP0000245412_exon_8	MDP0000245412_exon_8	Malus x domestica	CDS
MDP0000245412_exon_9	MDP0000245412_exon_9	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000245412	MDP0000245412	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 3..22 score
None	No IPR available	SEG	seg	seg	coord: 41..53 score
None	No IPR available	COIL	coil	coiled-coil	coord: 378..399 score: NAcoord: 717..724 score: NAcoord: 725..738 score: NAcoord: 759..787 score
None	No IPR available	GENE3D	1.10.510.10	no description	coord: 197..403 score: 4.7
None	No IPR available	GENE3D	3.30.200.20	no description	coord: 124..196 score: 4.2
None	No IPR available	PANTHER	PTHR24420	FAMILY NOT NAMED	coord: 14..463 score: 7.6e
None	No IPR available	PANTHER	PTHR24420:SF738	SUBFAMILY NOT NAMED	coord: 14..463 score: 7.6e
None	No IPR available	SEG	seg	seg	coord: 24..47 score: NAcoord: 721..732 score: NAcoord: 751..779 score: NAcoord: 849..859 score
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 441..592 score: 7.4
None	No IPR available	SEG	seg	seg	coord: 59..70 score
None	No IPR available	SEG	seg	seg	coord: 9..22 score
None	No IPR available	SEG	seg	seg	coord: 10..23 score
None	No IPR available	SEG	seg	seg	coord: 21..42 score: NAcoord: 64..78 score
None	No IPR available	SEG	seg	seg	coord: 68..88 score
None	No IPR available	SEG	seg	seg	coord: 16..32 score
None	No IPR available	SEG	seg	seg	coord: 33..50 score
None	No IPR available	SEG	seg	seg	coord: 1..12 score
None	No IPR available	SEG	seg	seg	coord: 60..69 score
IPR000719	Protein kinase, catalytic domain	PROFILE	PS50011	PROTEIN_KINASE_DOM	coord: 121..395 score: 26
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	PFAM	PF07714	Pkinase_Tyr	coord: 125..390 score: 5.8
IPR002290	Serine/threonine- / dual-specificity protein kinase, catalytic domain	SMART	SM00220	Serine/Threonine protein kinases, catalytic	coord: 121..396 score: 1.6
IPR006016	UspA	PFAM	PF00582	Usp	coord: 443..561 score: 6.6
IPR011009	Protein kinase-like domain	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 86..392 score: 1
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	no description	coord: 443..566 score: 1.9
IPR020635	Tyrosine-protein kinase, catalytic domain	SMART	SM00219	Tyrosine kinase, catalytic domain	coord: 120..392 score: 2.7

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr16:19051415..19058575-
mRNA from alignment at MDC021284.110:1996..9156-
coding sequence from alignment at MDC021284.110:1996..9156-

mRNA sequence

>MDP0000245412 ID=MDP0000245412; Name=MDP0000245412; organism=Malus x domestica; type=mRNA; length=7161bp
AATGAAGGCCTATGTGGAGGGCCAACTAATATAGCATGCAGTACCCACTC
GAAGAAGCCCGCACCCTGGATTATCGTGCTGATTGTGATCGCTGTCATCG
TAGCAATCCTCGCCATAGTTGCTTTACTGGTCTTCCTTCTTGGACGCCGC
AAAAATACATCTGAATCATCGGTAGAGGCTCCACCACCATCAACAGCAAC
TGTCCAAAACAGATCAGTTCAAAAAGAACTAGAGCACCAAGCAAGTGCTC
CGGGATCACCCGAAAACTCGAGCAGAGGGAGTGGAAAGAAGGGTGAACAG
AGCTTGAAGCTTTCGTTTGTGAGAGATGACAGGGAGAGGTTTGATATGCA
AGACTTGCTGAAAGCCTCGGCGGAGGTGTTAGGCAGCGGTTGTTTTGGGT
CATCTTACAAGGCTGCTTTGCTGACCGGACCTGTKATGGTTGTGAAGAGG
TATAAGCAGATGAATAATGTGGGAAGAGAGGAGTTCCTAGAGCACATGAG
AAGGATTGGGAGATTGGGACATCCTAATTTGCTTCCACTTGTGGCTTATT
ATTATAAGAAGGAAGAGAAGCTCTTGATTGCTGACCATGTTCAAAACGGC
AGCTTGGCTCGTCATCTTCATGGTAAGTTCCTTTTCCTTTAAACATAAAC
ATATTTGCATTTTACCTAAACATGAAATGACCATATTATCTAGTTGTTCT
AGTAATTGATGAGATACTACTTTTAAGTGATTAAAACTATKTGTATGCCA
CATCTCTMATCGAGACATGCCGCACATTTGTATAGGCGGAGTAATGCCTT
TATCAGAGATGTGATTTGCAATGTCGTCCATATAGCATTKCTCGTACATA
TGGTTTRCAAATCTTKAATGTCATTATAGACAATTTTACTTTTAATGTTT
TAGTTGTATATATCAATCCATGTCTCTTCCGCAGTCTCTCCTTTAGATTG
AGGAAKAGACATAAATGAATGGCTAATCAATTTACTTGGTGTTATTTGCA
CTTTCATGATCAGGAAACCAAACCCTAGGCCAACCAAGCCTTGACTGGCC
AACCCGTTTGAAGATTGTCAAAGGAGTAGCACATGGCTTACGCTATCTCT
ACGCTGAGCTTCCCAGCCTAGTAGCACCCCATGGCCACCTCAAATCATCA
AACGTTCTTCTCAACGAGTCCTACGAGCCCCTTGTCACCGACTACGGCCT
AATCCCTGTGGTAAACCAAGAACATGCTCACACCATCATGGTGGCCTACA
AGTCCCCAGAGTACATGCAAAGCAAGCGCATTACAAAGAAGACCGATGTT
TGGAGCTTCGGAGTGCTGATCTTGGAGATCTTAACGGGGAAGTTGCCCAC
CAACTTTCTGCAGCAAGGTAAAGGAAGCGAGGAGGATTTGGCAAGTTGGG
TGAACTCGGTGCCTCGGGGGGAGTGGTTCAATCAGGTGTTTGATACAGGA
ATGGGGGCAGGCAAGAGTAGTGAGGGAGAGATGCTGAAGCTCTTGAAAAT
TGGGTTGGAATGTTGTGAAGGGGAAGTGGACAAGAGATTGGATCTGAAAG
AGGTTGTGGAGAGGATTGAAGAGTTGAAAGAGAAGGACAACCGCGGCGAT
TCAGATATTTTCTCTACGTGAGCTAGCGAAGGCGACATGACGAAGATTGT
TGGCTGATGAAATAGTTCTCTCTTTCTGCATGACATGCTCAATGGTTCAT
TGATTCAGTGATGATAAGAAACCTCTTAATTTGTATCTGTCAGGTCCCTC
CCAATTCCCTCAACAGGATGAGAGACAACAATGAACTGCTTGTCTATAAG
ATTTGGCTTTATATGCAAGCTAGGTTTAAACAAACTACTTTAATATTCCA
TAACATAATTTCCTTCTAGTATAACCATTTATTCATCAAATAATCCTTAA
TTACAATATCATACCCAAAAGAGTTTATAAAATTTCATTTCGCACCACAT
CTAAATGGAATAGGATTTGCACACGTTTCAAATTAATTACAGGTTCAAAG
CAATGATATACTCTCCAYCTATGTACTCGGTATTTATCACTTGGTTCTTA
TATTTTGACTATTCCAAATCATCAAGGAAGGGGAAATAATAATAAAGAAC
CATTCAGGGAGAAAATGATCACTAACATCTCCCTTCCCACCCTCACCAAA
TATATAAAATTTWAAAATTTTAAAAAAAAATTAAAGAAGAAGAAAAATCA
AAATTTCCCAATAAATTMTCTCCATATTAACTCGAGAAGGTAAGAGGTTT
TTTCTTTTTCTTAATAAATTATAGAGAAAAATTACTACTAAAAAAGTCCT
ATGATCGATCCTAAAAAATAGGAGAAACTTTGATTGTACACCATAAAAGT
GATTTTTCTTATATCAGTGATTGAACAATTACAGTTGTCGTATTCTAGCT
GCAGATGTTCATAATCTAACGATATGCACGAGAACCAAGGGTGAGAACCA
AGTCTAGGGCCTAGGCTTTTCATTYATCTCTTGTTATCTGTAGTATATTT
ATCTCTCTCGTATGTATTGGTTCCTCTATATGTAAGGGAAACCCTCTCAG
AGATCACTACAAGGTCAAAAACCGAAACTTAACTGCCTTTTTTTTTTTCT
CATCGTTCTTCAAGTTCTCCATTGTAACAAGTCATCTCTCATCTGACGGT
ATGTACATGTGGAATCAAAACTTTGTTGGTAGACTCGGTTAATATTAGAA
ATTTTAACCGATGTGGGCGTTTTGGCATGCAACTGCATCAATCGTCTCTA
TATCTAGGGCCAAATTTCTAAAATAATGCTGTAGATATGGGGGGTTAATT
AGCTATAACCGAGTTAATGTTTGTTTTAATTAACTTTAAGTAGTTTTGAA
TAATTAAGTTCCTCTGGCCCTTAGGCAATTGGGAAGTTTTAAGAGTCCAG
AAGGAGAGACAGAGAGAAGGAGACAGAAAGCTTTGCATTATTTTGTTATA
TTATAATTTTTTTATTTTTGAAATTTACTTATGTTCCCATATTCATATTT
GAGCAAGAGGTTGTTGAATCTGAGAGTTGAGAAAGAGGAAGGGCGGAAGA
GAATAATGTGGTATAACAATGTTGATAATGGAAATGATAATCAAGGCGCG
GGGACAATAGCAGTGGCAATCGGCGAGGGYGTCTCCAGCCAAAATGCTTT
GAAATGGGCTATTGATCATCTCGTCTCTAGATCTACCACCCATGCTCCTA
TCAAGCTTGTCCATGTTATTCACCAATCTAATTCCTATAATAAACTTCAT
GCAACTGGTAACTCCCTCTCTCTATATCTTTCATACATATGCACGTGCCG
CATATTGTCCGATAATTAGTTCTATTCATCAATTAATATTGTGTTAATTA
TCACATTTCTAATACAGGCRAGACTCATTTATGTGAATGTCTCACATAGA
AGTTTTCTGCGTGTTGAGATGACACAAATAGCAGTACTCTTGCGTGAATA
ATTAACATATTTTGTTTKATTTTTGGTGGCGCTTATAGAGAACAACCCAT
CAAATGAAGGGCAAGCTCATGATGCTCCAAATACAGATTTCTTGCTTCCA
TTTCGTTGCTACTGTACACGCAAACGAGTAGGTTAATTCAATTCATAACT
TCTTTTTTTGTAAGAAACCTCAGTGATAATAAATGATATTTAGAAAAGGA
ATTACACCTAATCCGGAGGACATAAAACTTTATCCGTCACTCTTTTTTTA
ATCTAATCAACATACCTATTTAKATACGCTATATAATTAAGAAGCTAGTT
GTCTATGATTAAATATTTTAAGTTTTGACAAATTATAATTAGATGTAGTT
GATTTGTGAAATTAATATCATCAGGTACAATGCGAGACTGTTCTACTGGA
GGATCAAGATGTAGCTGAGGCCTTAGTTGAGTACATTTCCCGCCATGGCA
TTGTGAGTATTGTTGTTGGTGCGACATCCAGGACTGGTGGGTTAACAAGG
TATGCAATGTAGCTAGATATGTAAGATTGTGCGTCTATGTGCAATTTTGT
TTGTCCAAACTCATATGATGTTCAAAWCATATTGTTCAAGTAGGCGTCGA
TTCAAGGCATCTGAATCTATTCCAGGCAGAGTCCTGAAGTTGGCACCACA
TTTCTGCTCAGTATACACCATCAAACAAGGAAGGGTGAGTGAAATGCGTG
AAGCGTCTCGTCCACTTCCAAATATTCCTGCTGGGGAGAGGGCAGCAGAT
CACCATTCCGATCACATGTAAGCATTTATATATTCAATAAATATTGGATC
ATTTTGCCAAACTTTCAATWTCTACCAAATATTACATTAAAAAACATACA
ATGCAAACGTCTATCAACATGCAACCAATATGTTACTTATGTTGAGAATG
AGTCCCACATTGATGGGAGGAGGGACCTTATATGGGCTTATAAGAGGTTG
GGTTACTCCCCCTACTCCCCATATTGCCAATTRGTTTTATGGTTGAGCCT
CAACTTTCTTCATGATATCAGAGCARGTTGTCCCACGTGTAAAGCCAAAY
GGCCACATGTGCTCCATATCATCCCGTTATGTTGATCCACGTGTTAGGCT
CGAAAATTCGCAATACGTGAGGGGACGTGTTGAGAATGAATCTCACATTG
ATAAGAGAAGGGACCACGTGTGAAGCCAAACGGCCACATGTGCTCCACGT
CACCCCCGTTATGTTGATTCACGTGTTAGACTCGAAATTCGCAACACGTG
AGGGGGCATGTTGAGAATGAGTCCCACATTGATAGGAGGAGGGACCTTGC
ATGGGCTTATAAGAGCAATTCCACCGGAGTGGAATTTGCCCAGGACCCAG
GAGAAAAACAGGGCCAGCACCCTGTCAACCAAGTCCATCCCTCAATTTGA
CTGGTACCCAGCCTGAGCTGGGCAAGAGCCCAGCCCAAAACAGACTGAGC
AAGAAGCTGGGCAGTTTGCTTGGCGCGTGCGCTTCACGCAGGCGCTGCCG
CGAGTAGCCGACAGGGCTGTCAGCCCACTTGTGCTCCGAATCCCATCAGC
GACGTGGCATTCTTATATCCGTTGGATTTCCAACGGCTAGTTTTTCTAGA
CCGTTGGATTTCCAACGGTAAAAAAAATTTAAATTTTACTTTTAAAATAT
ACCGTCCGATCACAGATCAACGGTCCATGTTAATTAACTAATTAAAATTT
ATTAAAACATACAGAAAAAATATTAAAAAATACATAAAATTTAAAAAAAA
ATTTATTTATTTTTTCTATAAATACCTAACTCTCATCTTCTACCTTACAC
CACATTTCAATATTTTCTACACTTTCTACCAAAGCTTTCATATACTTTTT
GTGTGAAAAAAAAATACCAAAAAACTTGTGGTTGAAGAATAAAGTGTATT
TGATGAGTTTATGTAATTTCATTTTAGTGTGTTTTTTTTTTAGTTTATTT
GATGAGTATGTAATTTTATTTTAGTGTGTATTTTTTTTTAAGTTTATTTG
AAATTTTATCTGAAATTGGTTAAAAATCTTATTAGAAATAAACTTAAAAA
AAAACACACCAAATAAATACGCTGGGTACCAGCGCATTTTTTTAGGGGTG
GAGATGCCTTGGCCTATTACTGTTCACTCCAGTCTATTACTGTTCATTTG
AGTGGATAAATGCGCTGGGTGCTGGCGCAAAGTCCTTAGGGGTGGAATTG
CTCTAAGAGGTTGGGCTACTCCCATATTCTCAATTGATTTTATGGTGGAA
CCTCAACTTTCTTCAACTTATTTGACTCATTTATTAATTAACTGATTTGG
TTGATGTCTGATCTAGAGGTAGAGGTCCGATCAACGGAGCATATGATGAG
GTCTCAATGGCTGAGAATGATGTTTCGTTTGTAAGCTCAGAAAGACCAAG
TACTGATAGCATTTTATCTTTCTACCAAAATTTTGGGCCAGCTGGACTGA
CCCGATTTCCTTTAGAATCATCATCAAACATGGAGAGTATTGCAAAACTT
GACGAAGATTTTGACAGTTTTGATTTTTATGCTCCCCATGAACCGTCATC
AACTGTACAATGTTGTGGAGGAACACCATTCTTGTCGCAGAAAGTATTGG
TAAGTCATTTGAATAGGATACGAGTCAATTACCAACTAAACACAAAAGAA
TGTTTATTTTGATTCGAAATCTTTCGGTACTTGCAGGAAGATATGGAAGA
GGAGATRAAAAGGCTTAGAGTGGAGCTGAAGCAAACAATGGACATGTACC
ATGCAGCCTGCAAAGAAGCAGTGGCAGCAAAACAGAAGGTTCTAGCATAA
TTTAAACCGTCATAAATCTTCCTAGCAACTTAGAGCTAGCATTTTAGCTA
ATAGCGCTTTCTCTTACCATCATAAGTTTTTAGGTTGCATGCATGTATCT
CACTGAATCTCTTTGCTCTTCCATCTCTCTCATAAAGGTAAGACCACTTG
CATATACAGCCAAAGCTCCAGATTCGATTAGCAATGTGATCATAATAACT
TGTTTAAGCATTCTTGCTAAACTGATACCGTTGAATATTTAGAATACACA
TTCATATAATATAYAGCTATGTAACACTCAACCCAATCAATAATTTTAGA
TTCACGGTCAAACAACACGACAAGAGAGAATTTCTCTATTTAAGTGTATA
TGGCATAATGATATTCACATCTATTTTGTTATTTGGTCCATGCATCGTRG
CGAACAATTATCACCTAAACTTTGAGTATTCTTTTTTTGGTCGAAAACTT
TGGSTATATTAYATCGTAATGCCGTACTTTCATCTATTTTATTATTTGGA
TTTAAGTGTCTCAATAATTATCCTGATTGTAGTCTTCTCATCTTACTCAT
ATTCAATATACAGACAATTGAGCTAGARGAGTGGAAACTGAAAGAAGAGA
AAAAACTAGAAGAGGCACGACTTGCCTTAGAAGCAACTAGGGCAGCTATG
GAGAAGAAAAAAGCAAATTCTAAGGCAGCAGTTTTGGCAGCTGATCATCA
TCACGAAGCCGCTCAGAGGTTTRCTGAGAAAGAGGTGCAAACAACGATCA
GTGCAGATCAAATATTCAAAGCTTTAAGGGAAGCTGACGATGAAGAAAAG
AAAAGAGTTTTGGATGCTTTAGGCCAGTCCCAGATAGTTTTCAAATACCA
AAGCTTAGTTCATATCTTAGTTGTTTTATTGTTACTTTCTTTTTACTGTT
CACTGTTTTAG

protein sequence of MDP0000245412

>MDP0000245412 ID=MDP0000245412; Name=MDP0000245412; organism=Malus x domestica; type=polypeptide; length=866bp
NEGLCGGPTNIACSTHSKKPAPWIIVLIVIAVIVAILAIVALLVFLLGRR
KNTSESSVEAPPPSTATVQNRSVQKELEHQASAPGSPENSSRGSGKKGEQ
SLKLSFVRDDRERFDMQDLLKASAEVLGSGCFGSSYKAALLTGPVMVVKR
YKQMNNVGREEFLEHMRRIGRLGHPNLLPLVAYYYKKEEKLLIADHVQNG
SLARHLHGNQTLGQPSLDWPTRLKIVKGVAHGLRYLYAELPSLVAPHGHL
KSSNVLLNESYEPLVTDYGLIPVVNQEHAHTIMVAYKSPEYMQSKRITKK
TDVWSFGVLILEILTGKLPTNFLQQGKGSEEDLASWVNSVPRGEWFNQVF
DTGMGAGKSSEGEMLKLLKIGLECCEGEVDKRLDLKEVVERIEELKEKDN
RGDSDIFSTKRLLNLRVEKEEGRKRIMWYNNVDNGNDNQGAGTIAVAIGE
GVSSQNALKWAIDHLVSRSTTHAPIKLVHVIHQSNSYNKLHATENNPSNE
GQAHDAPNTDFLLPFRCYCTRKRVQCETVLLEDQDVAEALVEYISRHGIV
SIVVGATSRTGGLTRRRFKASESIPGRVLKLAPHFCSVYTIKQGRVSEMR
EASRPLPNIPAGERAADHHSDHIGRGPINGAYDEVSMAENDVSFVSSERP
STDSILSFYQNFGPAGLTRFPLESSSNMESIAKLDEDFDSFDFYAPHEPS
STVQCCGGTPFLSQKVLEDMEEEXKRLRVELKQTMDMYHAACKEAVAAKQ
KTIELEEWKLKEEKKLEEARLALEATRAAMEKKKANSKAAVLAADHHHEA
AQRFXEKEVQTTISADQIFKALREADDEEKKRVLDALGQSQIVFKYQSLV
HILVVLLLLSFYCSLF

mRNA from alignment at chr16:19051415..19058575-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000245412 ID=MDP0000245412; Name=MDP0000245412; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr16:19051415..19058575- (Malus x domestica

mRNA from alignment at MDC021284.110:1996..9156-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000245412 ID=MDP0000245412; Name=MDP0000245412; organism=Malus x domestica; type=mRNA; length=7161bp; location=Sequence derived from: MDC021284.110:1996..9156- (Malus x domestica
AATGAAGGCCTATGTGGAGGGCCAACTAATATAGCATGCAGTACCCACTC
GAAGAAGCCCGCACCCTGGATTATCGTGCTGATTGTGATCGCTGTCATCG
TAGCAATCCTCGCCATAGTTGCTTTACTGGTCTTCCTTCTTGGACGCCGC
AAAAATACATCTGAATCATCGGTAGAGGCTCCACCACCATCAACAGCAAC
TGTCCAAAACAGATCAGTTCAAAAAGAACTAGAGCACCAAGCAAGTGCTC
CGGGATCACCCGAAAACTCGAGCAGAGGGAGTGGAAAGAAGGGTGAACAG
AGCTTGAAGCTTTCGTTTGTGAGAGATGACAGGGAGAGGTTTGATATGCA
AGACTTGCTGAAAGCCTCGGCGGAGGTGTTAGGCAGCGGTTGTTTTGGGT
CATCTTACAAGGCTGCTTTGCTGACCGGACCTGTKATGGTTGTGAAGAGG
TATAAGCAGATGAATAATGTGGGAAGAGAGGAGTTCCTAGAGCACATGAG
AAGGATTGGGAGATTGGGACATCCTAATTTGCTTCCACTTGTGGCTTATT
ATTATAAGAAGGAAGAGAAGCTCTTGATTGCTGACCATGTTCAAAACGGC
AGCTTGGCTCGTCATCTTCATGGTAAGTTCCTTTTCCTTTAAACATAAAC
ATATTTGCATTTTACCTAAACATGAAATGACCATATTATCTAGTTGTTCT
AGTAATTGATGAGATACTACTTTTAAGTGATTAAAACTATKTGTATGCCA
CATCTCTMATCGAGACATGCCGCACATTTGTATAGGCGGAGTAATGCCTT
TATCAGAGATGTGATTTGCAATGTCGTCCATATAGCATTKCTCGTACATA
TGGTTTRCAAATCTTKAATGTCATTATAGACAATTTTACTTTTAATGTTT
TAGTTGTATATATCAATCCATGTCTCTTCCGCAGTCTCTCCTTTAGATTG
AGGAAKAGACATAAATGAATGGCTAATCAATTTACTTGGTGTTATTTGCA
CTTTCATGATCAGGAAACCAAACCCTAGGCCAACCAAGCCTTGACTGGCC
AACCCGTTTGAAGATTGTCAAAGGAGTAGCACATGGCTTACGCTATCTCT
ACGCTGAGCTTCCCAGCCTAGTAGCACCCCATGGCCACCTCAAATCATCA
AACGTTCTTCTCAACGAGTCCTACGAGCCCCTTGTCACCGACTACGGCCT
AATCCCTGTGGTAAACCAAGAACATGCTCACACCATCATGGTGGCCTACA
AGTCCCCAGAGTACATGCAAAGCAAGCGCATTACAAAGAAGACCGATGTT
TGGAGCTTCGGAGTGCTGATCTTGGAGATCTTAACGGGGAAGTTGCCCAC
CAACTTTCTGCAGCAAGGTAAAGGAAGCGAGGAGGATTTGGCAAGTTGGG
TGAACTCGGTGCCTCGGGGGGAGTGGTTCAATCAGGTGTTTGATACAGGA
ATGGGGGCAGGCAAGAGTAGTGAGGGAGAGATGCTGAAGCTCTTGAAAAT
TGGGTTGGAATGTTGTGAAGGGGAAGTGGACAAGAGATTGGATCTGAAAG
AGGTTGTGGAGAGGATTGAAGAGTTGAAAGAGAAGGACAACCGCGGCGAT
TCAGATATTTTCTCTACGTGAGCTAGCGAAGGCGACATGACGAAGATTGT
TGGCTGATGAAATAGTTCTCTCTTTCTGCATGACATGCTCAATGGTTCAT
TGATTCAGTGATGATAAGAAACCTCTTAATTTGTATCTGTCAGGTCCCTC
CCAATTCCCTCAACAGGATGAGAGACAACAATGAACTGCTTGTCTATAAG
ATTTGGCTTTATATGCAAGCTAGGTTTAAACAAACTACTTTAATATTCCA
TAACATAATTTCCTTCTAGTATAACCATTTATTCATCAAATAATCCTTAA
TTACAATATCATACCCAAAAGAGTTTATAAAATTTCATTTCGCACCACAT
CTAAATGGAATAGGATTTGCACACGTTTCAAATTAATTACAGGTTCAAAG
CAATGATATACTCTCCAYCTATGTACTCGGTATTTATCACTTGGTTCTTA
TATTTTGACTATTCCAAATCATCAAGGAAGGGGAAATAATAATAAAGAAC
CATTCAGGGAGAAAATGATCACTAACATCTCCCTTCCCACCCTCACCAAA
TATATAAAATTTWAAAATTTTAAAAAAAAATTAAAGAAGAAGAAAAATCA
AAATTTCCCAATAAATTMTCTCCATATTAACTCGAGAAGGTAAGAGGTTT
TTTCTTTTTCTTAATAAATTATAGAGAAAAATTACTACTAAAAAAGTCCT
ATGATCGATCCTAAAAAATAGGAGAAACTTTGATTGTACACCATAAAAGT
GATTTTTCTTATATCAGTGATTGAACAATTACAGTTGTCGTATTCTAGCT
GCAGATGTTCATAATCTAACGATATGCACGAGAACCAAGGGTGAGAACCA
AGTCTAGGGCCTAGGCTTTTCATTYATCTCTTGTTATCTGTAGTATATTT
ATCTCTCTCGTATGTATTGGTTCCTCTATATGTAAGGGAAACCCTCTCAG
AGATCACTACAAGGTCAAAAACCGAAACTTAACTGCCTTTTTTTTTTTCT
CATCGTTCTTCAAGTTCTCCATTGTAACAAGTCATCTCTCATCTGACGGT
ATGTACATGTGGAATCAAAACTTTGTTGGTAGACTCGGTTAATATTAGAA
ATTTTAACCGATGTGGGCGTTTTGGCATGCAACTGCATCAATCGTCTCTA
TATCTAGGGCCAAATTTCTAAAATAATGCTGTAGATATGGGGGGTTAATT
AGCTATAACCGAGTTAATGTTTGTTTTAATTAACTTTAAGTAGTTTTGAA
TAATTAAGTTCCTCTGGCCCTTAGGCAATTGGGAAGTTTTAAGAGTCCAG
AAGGAGAGACAGAGAGAAGGAGACAGAAAGCTTTGCATTATTTTGTTATA
TTATAATTTTTTTATTTTTGAAATTTACTTATGTTCCCATATTCATATTT
GAGCAAGAGGTTGTTGAATCTGAGAGTTGAGAAAGAGGAAGGGCGGAAGA
GAATAATGTGGTATAACAATGTTGATAATGGAAATGATAATCAAGGCGCG
GGGACAATAGCAGTGGCAATCGGCGAGGGYGTCTCCAGCCAAAATGCTTT
GAAATGGGCTATTGATCATCTCGTCTCTAGATCTACCACCCATGCTCCTA
TCAAGCTTGTCCATGTTATTCACCAATCTAATTCCTATAATAAACTTCAT
GCAACTGGTAACTCCCTCTCTCTATATCTTTCATACATATGCACGTGCCG
CATATTGTCCGATAATTAGTTCTATTCATCAATTAATATTGTGTTAATTA
TCACATTTCTAATACAGGCRAGACTCATTTATGTGAATGTCTCACATAGA
AGTTTTCTGCGTGTTGAGATGACACAAATAGCAGTACTCTTGCGTGAATA
ATTAACATATTTTGTTTKATTTTTGGTGGCGCTTATAGAGAACAACCCAT
CAAATGAAGGGCAAGCTCATGATGCTCCAAATACAGATTTCTTGCTTCCA
TTTCGTTGCTACTGTACACGCAAACGAGTAGGTTAATTCAATTCATAACT
TCTTTTTTTGTAAGAAACCTCAGTGATAATAAATGATATTTAGAAAAGGA
ATTACACCTAATCCGGAGGACATAAAACTTTATCCGTCACTCTTTTTTTA
ATCTAATCAACATACCTATTTAKATACGCTATATAATTAAGAAGCTAGTT
GTCTATGATTAAATATTTTAAGTTTTGACAAATTATAATTAGATGTAGTT
GATTTGTGAAATTAATATCATCAGGTACAATGCGAGACTGTTCTACTGGA
GGATCAAGATGTAGCTGAGGCCTTAGTTGAGTACATTTCCCGCCATGGCA
TTGTGAGTATTGTTGTTGGTGCGACATCCAGGACTGGTGGGTTAACAAGG
TATGCAATGTAGCTAGATATGTAAGATTGTGCGTCTATGTGCAATTTTGT
TTGTCCAAACTCATATGATGTTCAAAWCATATTGTTCAAGTAGGCGTCGA
TTCAAGGCATCTGAATCTATTCCAGGCAGAGTCCTGAAGTTGGCACCACA
TTTCTGCTCAGTATACACCATCAAACAAGGAAGGGTGAGTGAAATGCGTG
AAGCGTCTCGTCCACTTCCAAATATTCCTGCTGGGGAGAGGGCAGCAGAT
CACCATTCCGATCACATGTAAGCATTTATATATTCAATAAATATTGGATC
ATTTTGCCAAACTTTCAATWTCTACCAAATATTACATTAAAAAACATACA
ATGCAAACGTCTATCAACATGCAACCAATATGTTACTTATGTTGAGAATG
AGTCCCACATTGATGGGAGGAGGGACCTTATATGGGCTTATAAGAGGTTG
GGTTACTCCCCCTACTCCCCATATTGCCAATTRGTTTTATGGTTGAGCCT
CAACTTTCTTCATGATATCAGAGCARGTTGTCCCACGTGTAAAGCCAAAY
GGCCACATGTGCTCCATATCATCCCGTTATGTTGATCCACGTGTTAGGCT
CGAAAATTCGCAATACGTGAGGGGACGTGTTGAGAATGAATCTCACATTG
ATAAGAGAAGGGACCACGTGTGAAGCCAAACGGCCACATGTGCTCCACGT
CACCCCCGTTATGTTGATTCACGTGTTAGACTCGAAATTCGCAACACGTG
AGGGGGCATGTTGAGAATGAGTCCCACATTGATAGGAGGAGGGACCTTGC
ATGGGCTTATAAGAGCAATTCCACCGGAGTGGAATTTGCCCAGGACCCAG
GAGAAAAACAGGGCCAGCACCCTGTCAACCAAGTCCATCCCTCAATTTGA
CTGGTACCCAGCCTGAGCTGGGCAAGAGCCCAGCCCAAAACAGACTGAGC
AAGAAGCTGGGCAGTTTGCTTGGCGCGTGCGCTTCACGCAGGCGCTGCCG
CGAGTAGCCGACAGGGCTGTCAGCCCACTTGTGCTCCGAATCCCATCAGC
GACGTGGCATTCTTATATCCGTTGGATTTCCAACGGCTAGTTTTTCTAGA
CCGTTGGATTTCCAACGGTAAAAAAAATTTAAATTTTACTTTTAAAATAT
ACCGTCCGATCACAGATCAACGGTCCATGTTAATTAACTAATTAAAATTT
ATTAAAACATACAGAAAAAATATTAAAAAATACATAAAATTTAAAAAAAA
ATTTATTTATTTTTTCTATAAATACCTAACTCTCATCTTCTACCTTACAC
CACATTTCAATATTTTCTACACTTTCTACCAAAGCTTTCATATACTTTTT
GTGTGAAAAAAAAATACCAAAAAACTTGTGGTTGAAGAATAAAGTGTATT
TGATGAGTTTATGTAATTTCATTTTAGTGTGTTTTTTTTTTAGTTTATTT
GATGAGTATGTAATTTTATTTTAGTGTGTATTTTTTTTTAAGTTTATTTG
AAATTTTATCTGAAATTGGTTAAAAATCTTATTAGAAATAAACTTAAAAA
AAAACACACCAAATAAATACGCTGGGTACCAGCGCATTTTTTTAGGGGTG
GAGATGCCTTGGCCTATTACTGTTCACTCCAGTCTATTACTGTTCATTTG
AGTGGATAAATGCGCTGGGTGCTGGCGCAAAGTCCTTAGGGGTGGAATTG
CTCTAAGAGGTTGGGCTACTCCCATATTCTCAATTGATTTTATGGTGGAA
CCTCAACTTTCTTCAACTTATTTGACTCATTTATTAATTAACTGATTTGG
TTGATGTCTGATCTAGAGGTAGAGGTCCGATCAACGGAGCATATGATGAG
GTCTCAATGGCTGAGAATGATGTTTCGTTTGTAAGCTCAGAAAGACCAAG
TACTGATAGCATTTTATCTTTCTACCAAAATTTTGGGCCAGCTGGACTGA
CCCGATTTCCTTTAGAATCATCATCAAACATGGAGAGTATTGCAAAACTT
GACGAAGATTTTGACAGTTTTGATTTTTATGCTCCCCATGAACCGTCATC
AACTGTACAATGTTGTGGAGGAACACCATTCTTGTCGCAGAAAGTATTGG
TAAGTCATTTGAATAGGATACGAGTCAATTACCAACTAAACACAAAAGAA
TGTTTATTTTGATTCGAAATCTTTCGGTACTTGCAGGAAGATATGGAAGA
GGAGATRAAAAGGCTTAGAGTGGAGCTGAAGCAAACAATGGACATGTACC
ATGCAGCCTGCAAAGAAGCAGTGGCAGCAAAACAGAAGGTTCTAGCATAA
TTTAAACCGTCATAAATCTTCCTAGCAACTTAGAGCTAGCATTTTAGCTA
ATAGCGCTTTCTCTTACCATCATAAGTTTTTAGGTTGCATGCATGTATCT
CACTGAATCTCTTTGCTCTTCCATCTCTCTCATAAAGGTAAGACCACTTG
CATATACAGCCAAAGCTCCAGATTCGATTAGCAATGTGATCATAATAACT
TGTTTAAGCATTCTTGCTAAACTGATACCGTTGAATATTTAGAATACACA
TTCATATAATATAYAGCTATGTAACACTCAACCCAATCAATAATTTTAGA
TTCACGGTCAAACAACACGACAAGAGAGAATTTCTCTATTTAAGTGTATA
TGGCATAATGATATTCACATCTATTTTGTTATTTGGTCCATGCATCGTRG
CGAACAATTATCACCTAAACTTTGAGTATTCTTTTTTTGGTCGAAAACTT
TGGSTATATTAYATCGTAATGCCGTACTTTCATCTATTTTATTATTTGGA
TTTAAGTGTCTCAATAATTATCCTGATTGTAGTCTTCTCATCTTACTCAT
ATTCAATATACAGACAATTGAGCTAGARGAGTGGAAACTGAAAGAAGAGA
AAAAACTAGAAGAGGCACGACTTGCCTTAGAAGCAACTAGGGCAGCTATG
GAGAAGAAAAAAGCAAATTCTAAGGCAGCAGTTTTGGCAGCTGATCATCA
TCACGAAGCCGCTCAGAGGTTTRCTGAGAAAGAGGTGCAAACAACGATCA
GTGCAGATCAAATATTCAAAGCTTTAAGGGAAGCTGACGATGAAGAAAAG
AAAAGAGTTTTGGATGCTTTAGGCCAGTCCCAGATAGTTTTCAAATACCA
AAGCTTAGTTCATATCTTAGTTGTTTTATTGTTACTTTCTTTTTACTGTT
CACTGTTTTAG

Coding sequence (CDS) from alignment at MDC021284.110:1996..9156-

>MDP0000245412 ID=MDP0000245412; Name=MDP0000245412; organism=Malus x domestica; type=CDS; length=2601bp; location=Sequence derived from: MDC021284.110:1996..9156- (Malus x domestica
AATGAAGGCCTATGTGGAGGGCCAACTAATATAGCATGCAGTACCCACTC
GAAGAAGCCCGCACCCTGGATTATCGTGCTGATTGTGATCGCTGTCATCG
TAGCAATCCTCGCCATAGTTGCTTTACTGGTCTTCCTTCTTGGACGCCGC
AAAAATACATCTGAATCATCGGTAGAGGCTCCACCACCATCAACAGCAAC
TGTCCAAAACAGATCAGTTCAAAAAGAACTAGAGCACCAAGCAAGTGCTC
CGGGATCACCCGAAAACTCGAGCAGAGGGAGTGGAAAGAAGGGTGAACAG
AGCTTGAAGCTTTCGTTTGTGAGAGATGACAGGGAGAGGTTTGATATGCA
AGACTTGCTGAAAGCCTCGGCGGAGGTGTTAGGCAGCGGTTGTTTTGGGT
CATCTTACAAGGCTGCTTTGCTGACCGGACCTGTKATGGTTGTGAAGAGG
TATAAGCAGATGAATAATGTGGGAAGAGAGGAGTTCCTAGAGCACATGAG
AAGGATTGGGAGATTGGGACATCCTAATTTGCTTCCACTTGTGGCTTATT
ATTATAAGAAGGAAGAGAAGCTCTTGATTGCTGACCATGTTCAAAACGGC
AGCTTGGCTCGTCATCTTCATGGAAACCAAACCCTAGGCCAACCAAGCCT
TGACTGGCCAACCCGTTTGAAGATTGTCAAAGGAGTAGCACATGGCTTAC
GCTATCTCTACGCTGAGCTTCCCAGCCTAGTAGCACCCCATGGCCACCTC
AAATCATCAAACGTTCTTCTCAACGAGTCCTACGAGCCCCTTGTCACCGA
CTACGGCCTAATCCCTGTGGTAAACCAAGAACATGCTCACACCATCATGG
TGGCCTACAAGTCCCCAGAGTACATGCAAAGCAAGCGCATTACAAAGAAG
ACCGATGTTTGGAGCTTCGGAGTGCTGATCTTGGAGATCTTAACGGGGAA
GTTGCCCACCAACTTTCTGCAGCAAGGTAAAGGAAGCGAGGAGGATTTGG
CAAGTTGGGTGAACTCGGTGCCTCGGGGGGAGTGGTTCAATCAGGTGTTT
GATACAGGAATGGGGGCAGGCAAGAGTAGTGAGGGAGAGATGCTGAAGCT
CTTGAAAATTGGGTTGGAATGTTGTGAAGGGGAAGTGGACAAGAGATTGG
ATCTGAAAGAGGTTGTGGAGAGGATTGAAGAGTTGAAAGAGAAGGACAAC
CGCGGCGATTCAGATATTTTCTCTACCAAGAGGTTGTTGAATCTGAGAGT
TGAGAAAGAGGAAGGGCGGAAGAGAATAATGTGGTATAACAATGTTGATA
ATGGAAATGATAATCAAGGCGCGGGGACAATAGCAGTGGCAATCGGCGAG
GGYGTCTCCAGCCAAAATGCTTTGAAATGGGCTATTGATCATCTCGTCTC
TAGATCTACCACCCATGCTCCTATCAAGCTTGTCCATGTTATTCACCAAT
CTAATTCCTATAATAAACTTCATGCAACTGAGAACAACCCATCAAATGAA
GGGCAAGCTCATGATGCTCCAAATACAGATTTCTTGCTTCCATTTCGTTG
CTACTGTACACGCAAACGAGTACAATGCGAGACTGTTCTACTGGAGGATC
AAGATGTAGCTGAGGCCTTAGTTGAGTACATTTCCCGCCATGGCATTGTG
AGTATTGTTGTTGGTGCGACATCCAGGACTGGTGGGTTAACAAGGCGTCG
ATTCAAGGCATCTGAATCTATTCCAGGCAGAGTCCTGAAGTTGGCACCAC
ATTTCTGCTCAGTATACACCATCAAACAAGGAAGGGTGAGTGAAATGCGT
GAAGCGTCTCGTCCACTTCCAAATATTCCTGCTGGGGAGAGGGCAGCAGA
TCACCATTCCGATCACATAGGTAGAGGTCCGATCAACGGAGCATATGATG
AGGTCTCAATGGCTGAGAATGATGTTTCGTTTGTAAGCTCAGAAAGACCA
AGTACTGATAGCATTTTATCTTTCTACCAAAATTTTGGGCCAGCTGGACT
GACCCGATTTCCTTTAGAATCATCATCAAACATGGAGAGTATTGCAAAAC
TTGACGAAGATTTTGACAGTTTTGATTTTTATGCTCCCCATGAACCGTCA
TCAACTGTACAATGTTGTGGAGGAACACCATTCTTGTCGCAGAAAGTATT
GGAAGATATGGAAGAGGAGATRAAAAGGCTTAGAGTGGAGCTGAAGCAAA
CAATGGACATGTACCATGCAGCCTGCAAAGAAGCAGTGGCAGCAAAACAG
AAGACAATTGAGCTAGARGAGTGGAAACTGAAAGAAGAGAAAAAACTAGA
AGAGGCACGACTTGCCTTAGAAGCAACTAGGGCAGCTATGGAGAAGAAAA
AAGCAAATTCTAAGGCAGCAGTTTTGGCAGCTGATCATCATCACGAAGCC
GCTCAGAGGTTTRCTGAGAAAGAGGTGCAAACAACGATCAGTGCAGATCA
AATATTCAAAGCTTTAAGGGAAGCTGACGATGAAGAAAAGAAAAGAGTTT
TGGATGCTTTAGGCCAGTCCCAGATAGTTTTCAAATACCAAAGCTTAGTT
CATATCTTAGTTGTTTTATTGTTACTTTCTTTTTACTGTTCACTGTTTTA
G

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000719	Prot_kinase_dom
IPR001245	Ser-Thr/Tyr_kinase_cat_dom
IPR002290	Ser/Thr_dual-sp_kinase
IPR006016	UspA
IPR011009	Kinase-like_dom_sf
IPR014729	Rossmann-like_a/b/a_fold
IPR020635	Tyr_kinase_cat_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004672	protein kinase activity
GO:0005524	ATP binding
GO:0004713	protein tyrosine kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation
GO:0006950	response to stress