MDP0000267128, MDP0000267128 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000267128
Unique Name	MDP0000267128
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	9617

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr15	chromosome	chr15:15481139..15490755 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC001776.406	contig	MDC001776.406:11065..20681 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000267128_exon_1	MDP0000267128_exon_1	Malus x domestica	CDS
MDP0000267128_exon_2	MDP0000267128_exon_2	Malus x domestica	CDS
MDP0000267128_exon_3	MDP0000267128_exon_3	Malus x domestica	CDS
MDP0000267128_exon_4	MDP0000267128_exon_4	Malus x domestica	CDS
MDP0000267128_exon_5	MDP0000267128_exon_5	Malus x domestica	CDS
MDP0000267128_exon_6	MDP0000267128_exon_6	Malus x domestica	CDS
MDP0000267128_exon_7	MDP0000267128_exon_7	Malus x domestica	CDS
MDP0000267128_exon_8	MDP0000267128_exon_8	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000267128	MDP0000267128	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 229..523 score: 6.1e
IPR001878	Zinc finger, CCHC-type	GENE3D	4.10.60.10	no description	coord: 731..779 score: 2.4
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	zinc finger	coord: 737..753 score: 0.2coord: 762..778 score:
IPR001878	Zinc finger, CCHC-type	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 724..782 score: 8.6
IPR006501	Pectinesterase inhibitor	GENE3D	1.20.140.40	no description	coord: 39..187 score: 1
IPR006501	Pectinesterase inhibitor	PFAM	PF04043	PMEI	coord: 37..184 score: 7.4
IPR006501	Pectinesterase inhibitor	SMART	SM00856	Plant invertase/pectin methylesterase inhibi	coord: 34..185 score: 8.9
IPR006501	Pectinesterase inhibitor	TIGRFAMs	TIGR01614	PME_inhib: pectinesterase inhibitor domain	coord: 9..188 score: 5.2
IPR006501	Pectinesterase inhibitor	SUPERFAMILY	101148	Plant invertase/pectin methylesterase inhibitor	coord: 36..192 score: 2.4
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 220..537 score: 1.1e
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10	no description	coord: 224..528 score: 5e
IPR018040	Pectinesterase, active site	PROSITE	PS00503	PECTINESTERASE_2	coord: 371..380 score
None	No IPR available	PANTHER	PTHR11439	FAMILY NOT NAMED	coord: 1012..1431 score: 6.9
None	No IPR available	PFAM	PF13976	gag_pre-integrs	coord: 924..972 score: 2.6
None	No IPR available	PFAM	PF14223	UBN2	coord: 523..617 score: 2
None	No IPR available	SEG	seg	seg	coord: 8..20 score: NAcoord: 21..27 score: NAcoord: 59..70 score: NAcoord: 118..129 score: NAcoord: 954..969 score: NAcoord: 1148..1164 score: NAcoord: 1274..1289 score: NAcoord: 1371..1384 score
None	No IPR available	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1281..1448 score: 1.5
None	No IPR available	SEG	seg	seg	coord: 1..29 score
None	No IPR available	SEG	seg	seg	coord: 57..69 score
None	No IPR available	SEG	seg	seg	coord: 66..80 score: NAcoord: 105..120 score
None	No IPR available	SEG	seg	seg	coord: 13..28 score
None	No IPR available	SEG	seg	seg	coord: 81..100 score
None	No IPR available	SEG	seg	seg	coord: 26..44 score
None	No IPR available	SEG	seg	seg	coord: 4..30 score: NAcoord: 45..58 score
None	No IPR available	SEG	seg	seg	coord: 27..42 score: NAcoord: 101..128 score
None	No IPR available	SEG	seg	seg	coord: 1..10 score
None	No IPR available	SEG	seg	seg	coord: 48..63 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:15481139..15490755+
mRNA from alignment at MDC001776.406:11065..20681+
coding sequence from alignment at MDC001776.406:11065..20681+

mRNA sequence

>MDP0000267128 ID=MDP0000267128; Name=MDP0000267128; organism=Malus x domestica; type=mRNA; length=9617bp
ATGGCTTCCTCCACTCCAAAATTGCTGCAGCTCCTCTGCATAATCTTATT
TCTCCACATTTCTTCTTCTTCGTCATCGTCAAACACAACTACTTTTAATC
CCCATTTGGCGTCCCTAAGATCATTCTGCAAGTCCGCACCCTACCCAGAC
ATCTGCTTCGACTCGTTGAAGCTCTCAATCTCAATAAACATCACCCCCAA
CATCATCTCCTACCTCCTCCATTCCCTCCAAGTCGCGATCTCCGAAGCCG
GAAAGCTCACCGATCTCTTCTACAAGGCTGGACAGTACCCAAACATCGTC
GAGAAGCAAAAGGGAGCTGTCCAGGACTGCAAGGAGCTCCACCAAATCAC
TCTCTCTTCCTTACAAAGATCTGTGTCTCAAGTCCAAGCGGGAAACGCCA
AGAAACTCAACGATGCTAGGGCTTACCTCAGCGCCGCTCTCACAAACAAG
AACACTTGCATGGAAGGGTTGGATTCTGCTTCTGGCCCTATGAAGCCAAC
CCTAGTTAACTCCTTGACTAGCACATACAAATATGTAAGCAATTCTCTCT
CAGCTATCTCAAAACAAGGGACCAATAAAGGGCGCACAAATCGCCGTCTC
ATGAGCATTCCGAGGTGGTTGTCGAGGAGAGACCGGCGGATATTGGAGAG
TTCCGGTGACGAATATGACCCCAGGGAAGTCCTAACGGTTGCCGCGGATG
GATCAGGGAACTTCACCACAATTAGTGATGCTATTATTTTTGCTCCAAAT
AATAGTTATGATAGGACGATTATATATGTTAAAGAAGGGGTTTATGAAGA
AAATGTGGAGATTCCGAGCTACAAGACCAACATTGTTCTTCTTGGAGATG
GAAGTGACATCACTTTCATCACTGGTAACCGGAGTGTTGTTGATGGATGG
ACTACATTCAGATCTGCAACCGTCGGTAATTAATATTTCTAAATGCATTC
CTTGCTATCTTCAATTTACTGTCTTCTTCTTCCCCTATACTGGAGTCATA
TGTCAATGTCAGTCTTGTGGTGAGAAGATGCTTGACGATACTTTTGTGGT
CAAACATGCTATCAGTCTCACTCTCAGTCCAAATCGAACTTTTCATCTGA
TTTTGTTTAATTTTGTTCATACGCGTTTGTGTGAAAGGGTGACAAAGTCA
TCTAAAATTCTTATTTAAGAATTGAACAAGCTCAATGTTTTTAACTGACC
TTTTCAATCTAACATATGAGCAAATTTTGGTCAAAATCAAGATAAAAAGT
TTGATTTGGATATTACTGACATTTCCAACCCCACCACAATGAGGATTAGT
GCAATATAAGAAAATCCTCAATGGTACTATTGTGGTTAAACTTGTTATTA
GTCCAAATCAAACTTCCTATCTGTATTTTATCTATTCCACTTATTTACGT
GTTTCGTGTGAGAGGGTCAAAAGGTCATTTCAAGTCTTATCAACAGTCAA
CGTACAAGATTCAATGTCTTAAAATTGTTTCACCCGTCACGAGATGCACA
CATGATAAAAGTTAGACAAGGTTATGATAAAAATCTTAATTTGGACTGAG
ATCGATAACATGCTTAATCGTAGGGGATATTAGTGCAATTTTTAAAAAAT
CATGTTTACATTTGATAACCTTTCATGAATTCATTCCCAGTTTGTTTAAC
CCAACCAACATTCTCAATTTTTCCAGCTGTGTCCGCAGAGGGCTTTCTAG
CAAGAGACATAACAATTCGGAACACGGCAGGGCCAATAAAGCACCAAGCA
GTTGCTCTGAGAATTAATGCAGACTTGGCTGCAATTTACAAATGCACCAT
CGATGGCTACCAAGACACATTATACGTACACTCTTTTAGACAATTCTATA
GAGAGTGCGACATATTCGGAACCATAGACTACATATTTGGTAACGCCGCA
GTTGTATTTCAAGCATGCAACATCGTGTCGAAAATGCCAATGCCGGGACA
ATTCACAGTCGTCACAGCACAGTCCAGGGAGACACCAGATCAGAACACAG
GAATCTCCGTGCAGAACTGCTCCATTATTGCCACTGATGAGTTGTACTCC
AATTCCAGCATTGTCAAAAGCTACTTAGGCCGGCCGTGGAAGAATTACTC
TACGACTGTTGTCCTGGAGTCCTACATTGACGACTTTATTGACCCGACTG
GGTGGAAAAATTGGTCCGGGGACCTAGGGTTGAACACTTTGTACTATGGA
GAGTATGGGAATTATGGTCCTGGCGCTGGGACGGAAAATAGAGTGAACTG
GAAAGGACATCATGTTATGGACTATTATGATGCATCCAATTTCACTGTGC
AAGAGTTTATTGCTGGTGATGAATGGCTGCAGTACACTTCATTTCCTTAT
GATGATGGCATCTGATCTCTGTATGAATACTTTTGTTTGAAATAGTTTTT
TACAACAATTTAAAAATATGTGCATCAAAGGTGAAGTTGCATGGATGTGG
TGAAATATTTTCTTATTTTTTAGGGATATAGGGGGAGGGGGTATTTTCTG
ATTGGATGTTCTACACTTTGGACAGTTCAAAGTTCAAACCATGAACCCCA
AATAAAAAGCTAACAATTTGACCACTGGCCTCATGATTCTAAAGGAAATT
TGGTAAGTTAAACAAATATAGGCACTCGACGCCGCTCCATAATTTTGAGC
TCTCACAAGAACCCTTGAGTAGTTTATCGGTGAATTTTTTTTTTKGKCAA
TACGACATTCTAAATTACTATAATCTGTAAGAAAAGAAATCCAAACTTTA
GTACAAGAAAATTGACAGATTGCCCTAACTAATTGTCCAAATCCATGTGT
GCTAGTTAAAACTCTAAAGAAAAAGAAATGCTATTTTTAAAAAATTCATG
TGATTTTCTAATCCATCAATGACTTTAACTCTTTCAATGTATGTTGTGCT
TGTGCACATAACTTGTCAAGTAATATGATTAAAATGTGGTACACAAATGT
ACTCTCCATGTCATCACTGTATTCGTAATCGGCCAGTAATGACCATATTA
ACCTACCCTGTGACCATGGGTGGATTCATAGAGGGACCGGGGTGGTCCCA
AACCACTTGACATCTGGGAAAAACGTCTATGGAGGTCCTTCGAGGACCCT
CCAAATGTTTGGGCTGGGAGGACCATTCCATTCCTAGCTGTTATAAGTTT
CTACAGTTTAAGCAGTTTTATTTGTATTGTTAAATGCCATAAAGTTATAA
GCCTTATAATCTAAGCAATTTCTTTCAAGAAGGGTGAATGGGTTGCAGGC
TTGCAGAACACTCATTCGGAAGAAGACCCAAACGGTACGATTTTTTTAAG
GGAACATACTTTTTTTTTTTTTTTTATATAAATGACCTTGCTAAAAAAGA
CGCTTACAGTTTAGATTTCGTAACTTGTAATATTATTTTTAGGGGTGTGT
GCCTGTTAACTTATGTTCTTTGATTTTCTTCAATACATATGATTTAACGG
TTGAAAATTAGAAAAATGTGTGAGAAGTAAAAAGACGTGTGTATATATCA
CACCCCTATTTTTAAACCTTTTACATTGGAACCTCTCGACCTTAAAATTT
TGAATCGGCCCCTGTGTTGACTGATAATAATTGACTCAAGTGAATGCCAC
ATCATCTGCCACATCATCTGCCATGTCATTCATATTTCTGTTGAAAGTTA
GTTAGGATGGTGCTGTGTAGCTTACACAGTAAGCAAGGTAGTTAGGCTAC
TATAGGGATATAAAAAGCTGATTGCAGCTTATTGTTTGTAAGAAAAATAT
CATTCTATCAATACAAAACCTTTCATATTCTTTCTAAGTTTTCTTCTATA
TTCTCTGTATTGTTTCTTTCTTTTTCTTTCTGCAAGTCTGATCTTCTTGG
TTAAGATGGTATCGAGCCAAGGTTGATTTTTTTTTTTCTGGGTATTTTCT
TCCGCTGAGAAATTCTTTGGGATCGATCGTTGAAGGCTGTGGTGGAGTTC
TTGGAGGATTGGTGAAGTGCTTGAACGCTTGCTGATGAATTTTGGGTTGA
GGGTCATTCAATCARGTTGTTGGTTTCTTTCCTTATTCTTTGCACATCAA
GTGTTTGCGTTTTTGCTTCAGTGAAGATATATGGTGAATTGGAATGTTTT
CTTTGGTTTTTCATATATGGGTTATGTGTTGGATTTGATTAAGGCTGATG
CCAAGATTTGTTGAAGATAGACGAATTATAGTTGTGGTGTGATATGATTA
CAGTTGTTCATTTGMGAAATTGCTGGAATTTCAGYKTTTGAAGTATATAC
ATATAGAAGGCCGATGCCAWGAAGTAGTGAGAATATATTGAAGAGGTGAT
CATTGTTGAAGTTTGGAGTTAAACATATTTGTGATTGAGATTGATTTCTT
GTCAGTACTTTGTGATAAAGATGTCTGATAAATCAGTACGCATTGAAAGT
TTGCTTGGTATGTTGACTGTGAAGTTGCAAGATGACAATTTTGTTAAGTG
GAATTATCAGTTTCAGTCGGTTTTACGAGGGTATGATTTCTTTGAATTCT
TTACTGGTGAGTCTCCTTGTCCACCAAAGTTTGTGGTTAACACTGAGAAT
GGAGTGACTACAGAAWTCACAGCAGCTTATAAATCTTGGGTTCAGAAAGA
TATGGCCCTATTGAGTCTGTTAATTGCTACTTTGTCGGATGATGCTATGG
AATATGTAATAGGGTGTAAAACGTCTCATGAAGCTTGGATAAATTTACAA
GACCGTTATGCGTCTGTGTCCAGGGCTAGGATTAATCAACTCAAAATTGA
GTTTCATACAATTCAAAAAGGCAGTGATTCTATTGACAAGTATTTGCTTC
GGTTGAAAGCCATTCAGGATCAGCTTGTGTCTGCAGGGGAGAGGATTACT
GATAATGATGTTGTTATTACTGCTTTATCTGGATTACCACCGGAGTTTGA
TATTGTCAAGGCTGTAGTTTTAGCAAGGGAGACTTCTATTCCGCTGAAAG
ATTTCAGAGCGCAGTTGATTGGTGTTGAATCTGCTATGGAAGCAAGGGTC
TYTACGCTGGCAAGTGGCATGGCTGCAATGTATGTTCAAGGAGATAAGGT
CACAGGTGGTAATCAGAATTCCGGGTATTCACAAGGAGAGAGTTCAAATG
CAGGATCCCGAATTGGTGATATTCAAGGCTATCAAGGGAACAACAGGTTT
CAAAACAGAAATGGGTATAATACTTCTCAGGGGTCTAATACTTCTCAGAA
CTACAACAGAAATGGTTATGGGTCTTTCAATAATTCAAGGCCTTATTATA
ATGGGAATAGACAGAGATGGGGAAACAACTATAATAGTTCTTCTACTGGG
AATCGGTCTTCTTGGAATGGTAATACTACCTTCAAAACAGGTCCTATAGT
TGAATGTCAGATTTGTTCTCGCAGAGGTCATACTGCTGCAAACTGTTCGA
ATAGGAGTGATGGTTATCAGGTTATAATCTGTCAAATTTGTGGAAAGAAA
GGTCATAATGCTCTGGAATGTAGACATCGGAATAACTATTCCTATCAGGG
GGCACCTCCACCTCCTTCTCTTACTGCATTTTCTGCTCAAGCTCCGTCTC
ACATGACTGCTGCAGAATATGGTCAGAATGTTCAACATTTCTCTGCTGCT
GATACATGGGTKTTGGATACAGGTGCTTCACACCATATGACATCWAATCT
TGGGAATCTAAATCAACCTGTGCAGTACAATGGTGATGAGAAAATCACTA
TTGGTAATGGGGAAGGTTTGACTGTTCATCATATTGGTTCTACAACACTT
TCAACTCCACAACATTTATTGTTTCTCAAGAATGTTTTACATGTTCCAAC
YATTACTGTTAATCTCTTATCTGTTAAGAAATTATGTGAAGATAATCATT
GCTGGTTCATATGTGATGAGAGTATATTTTTTATACAGGACAAGGCAACA
GGAATGATGTTGTACCACGGCCAKAGTAGGGGAGAGCTATATGAGRTTCC
TGTGACTGTGTTTTCGAGAAGATTGGTKGCTGGTCCGAATAAAGCTGTTG
CATTACTTGGGAAAGCTGTAAAGACTTCTATTTGGCATAAGAGGCTTGGG
CATCCATCTGCAGAAGTGCTTGATGTTATGCTTAGAACTGTTGGACAGCC
TGTTAGTGCAGATTCCTCACCTTCTGTTTGTTCTTCATGTCTTTCTGGAA
AAATGTGTAGACAACCCTTTCCTGTCAAAGAAACTAGGGCTAGTTTTATG
TTTGAAAAAGTACATTCTGATATTTGGGGGCCTGCTCCAGTTAAGTCTCG
AGAAGGGTTTAGATACTATGTAAGTTTTGTGGATGAGTTCTCAAGATTTG
TATGGATCTTCCCTATTATCAATAAATCTGATGTTTTCCAAGTATTTGTC
AAGTTTTTKKCATTTGTTACAACTCAGTTTAATTCTGTAATTAAGTGTTT
ACAGACAGATGGTGGTTCTGAATATATGAGTAACAGGTTTCAGTCCTTTT
TGGCATTCAAAGGCACTGCACATTCCATATCATGCCCTTACACACCTCAG
CAGAATGGTCTTGCTGAGAGGAAACATAGGCACATCGTAAAGACTGCAAT
CACACTTTTAACAGAGGCTGAAGTTCCATTACAGTTCTGGAATTATGCTT
GTAATCATGCTGCTTTTCTGATCAACCGAATGCCGTGTAAGGTTTTGGGG
ATGAAGTCTCCATATCAGATTCTGTTTAAACAAGACCCTGTGTTGCATAC
WTTGAAGATATTTGGATCTGCAGTTTATCCATTCTTAAGGCCATATACTA
AACATAAATTGCAACCTCGGTCTAAGCAGTGTGTTTTTCTTGGTTTTGTR
GCTGGATATAAAGGGGTAGTCTGCTATGATTTGAGTAGTACTAAACTAGT
ATTGTCCAGACATGTGGTGCATGATGAGACTACATTTCCATTTAAAACAA
GYTTGCAGGTGTCTTATGGGAAGTTCAATACAGTCCAGAGTACAACAATG
TCTCYAATCATTGTTCCAATACCATGTTTTGGTTCTGATYCCCCAGCTTC
TCCAACCCATGYCGAGTCATATGCCAATCCAGAAATTGTGGAAGACCAAT
CAATGGATAACTTACAMGTTCCAAGCTCATCAAGTCAAGATTCTCCGAAT
CTCYCTGCTCATACTCATAGCTCTCCTACTCTCTCAACATCAACTCCAAG
TACAATATCATTGTTGCCTGTCCATAGTCCTTCTCAGTTAGAGGTACTAC
CACCAATCTCTTCTTCTGTGGTTGACACTAATGAAGAATCAGCTCACCAT
ATGGTCACCAGGTTGAAGTCCGGTGCCATTTCAAGAAGATCTTACACAGG
TTATATTGGTTCATTTCCAGAATTACAAACTCTACAGTTGGATAATGAAT
GTGATTTTACTGGGGGTTTTTCATTTGTTGCTGCAATAAAAGATTTGGAG
GAACCATCAACATTCCGAAAAGCTTCTACAAGCCCACATTGGCAAACTGC
AATGCAAGAGGAGTTTAATGCCCTCAAAACTCAAGGAACTTGGCAGTTGG
TTCCTTCTCCACCAAACAGAACCATTATTGGCAGTAAGTGGGTATATAAA
GTTAAGAAGAATCCTGATGGAAGTGTATCGAGGTATAAAGCCAGACTTGT
GGCTCAAGGTTTTTCCCAAGAACAAGGCATTGACTACTCAGAAACTTTTA
GTCCAGTAGTACGCCACACTACTGTACGACTCATTTTATCCTTAGCAGCT
ATAAATAAATGGGAATTGAGGCAGTTAGATATCAAAAATGCATTTCTGCA
TGGTGACTTACAAGAAGAGGTGTATATGAAACAGCCTCAAGGGTTTGTTG
ATCAAACTMAACCCCATTATGTCTGCAAGTTGATTAAATCGTTGTATGGG
TTGAAGCAAGCCCCTCGGGCATGGAATTCAAAGTTCACAACCTATTTACC
AGCTTTGGGATTTATACCCTCTTCATCGGATACCAGTTTGTTTGTGAAGA
ATGATGACAAGGATGTGGTGGTTCTTTTACTATATGTCGATGACATCATT
TTGACAGGATCAAATGCTARCAAAGTTCAGCAAGTTATCGATGATTTGGC
AGGTGTTTTTGACTTAAAGGATATGGGCAGACTTACTTACTTCCTGGGAC
TTCAGATTCAATACAAGGAGAATGGAGACATATTTGTGAATCAATCCAAG
TATGTTAAAGATCTTATTCATAAAGCTGGAATGGAGTCTTGTAAACCTGC
GAATACACCATGCAAACCTCACAATCAGATGCTATTGAATGAGGGCATAC
CATTGCAGGACTCCACATTGTACCGAAGTTTGGTTGGTTCCCTGCAATAT
CTCACTTTTACACGTCCAGATATAGCTTATGCTGTGAATTCCGTGTGTCA
ATTTATGACTGCTCCGACAGATATACATCTTACTTCTGTCAAACGAATTA
TTCGATATCTTCAAGGCACTGCCGAATGTGGTCTTACATATGCAGCTGAT
ACTGACATACATTTGACAGCGTTTTCTGATGCTGATTGGGCTGCTGATTT
GAACACAAGACAATCTGTGACTGGTTATGTGGTTTATCTTGGTGGGAATC
CAATCTCTTGGCAGTCAAAGAAGCAATCCTCTGTCTCTCGCAGTTCTACA
GAGGCGGAATACAAGGCACTTGCTCATACTGCAGCAGATGTGGCATGGAT
TCGGCTCCTTTTGAAAGATTTGGGAGTTGCATTACCTGTTCAACCCACTA
TATTCTGTGATAATAAATCCGCAATAGCACTCAGTGCTAATCCGGTGTAT
CATTCGAGAATCAAACACCTTGATACGGATTATCATTTTGTCCGTGAAAG
GGTGCATCATGGTGATCTGTTGGTTGAGTATCTCCCTACTAATGAACAGA
CCGCTGATATTCTTACTAAAGGATTACATAGTCCGCCATTCACTCGTCAT
TGTTTCAATCTCAAACTTGGTTTCCCTCGTTGAGATTGAGGGGGGATGTT
GACTGATAATAATTGACTCAAGTGAATGCCACATCATCTGCCACATCATC
TGCCATGTCATTCATATTTCTGTTGAAAGTTAGTTAGGATGGTGCTGTGT
AGCTTACACAGTAAGCAAGGTAGTTAGGCTACTATAGGGATATAAAAAGC
TGATTGCAGCTTATTGTTTGTAAGAAAAATATCATTCTATCAATACAAAA
CCTTTCATATTCTTTCTAAGTTTTCTTCTATATTCTCTGTATTGTTTCTT
TCTTTTTCTTTCTGCAAGTCTGATCTTCTTGGTTAAGACCCTGCTCGTGA
CGTGATAAAATTGATATGTCGATTAGCACTAAATAATAACAAATCTAGTC
AAAATGTTACCCTTCTAGCATGATTTGTTCTTTAATTAGTTGAAGAATGT
TGAGAATAGCCAAATATATATAATATATATAATGCTTGACTGGCTTAGTC
CATTGATTGGAGTCATGAGTTTGTTATGACTTCAATCCTAACCTCACAAA
AGAACACACACAACCATGAATTCGTTGACAATTTTGAACAACATATGTTC
ATACGTTGTTTGGCAGTAAGGGGTATGAATGTAATTTCGGAAGGATCCGC
GAGGGAAATGCGGTTGGAAGGGAAGAAAGGAAAGGACCCCTTCTTGTCGT
CTCCAACTAACTTTTGA

protein sequence of MDP0000267128

>MDP0000267128 ID=MDP0000267128; Name=MDP0000267128; organism=Malus x domestica; type=polypeptide; length=1462bp
MASSTPKLLQLLCIILFLHISSSSSSSNTTTFNPHLASLRSFCKSAPYPD
ICFDSLKLSISINITPNIISYLLHSLQVAISEAGKLTDLFYKAGQYPNIV
EKQKGAVQDCKELHQITLSSLQRSVSQVQAGNAKKLNDARAYLSAALTNK
NTCMEGLDSASGPMKPTLVNSLTSTYKYVSNSLSAISKQGTNKGRTNRRL
MSIPRWLSRRDRRILESSGDEYDPREVLTVAADGSGNFTTISDAIIFAPN
NSYDRTIIYVKEGVYEENVEIPSYKTNIVLLGDGSDITFITGNRSVVDGW
TTFRSATVAVSAEGFLARDITIRNTAGPIKHQAVALRINADLAAIYKCTI
DGYQDTLYVHSFRQFYRECDIFGTIDYIFGNAAVVFQACNIVSKMPMPGQ
FTVVTAQSRETPDQNTGISVQNCSIIATDELYSNSSIVKSYLGRPWKNYS
TTVVLESYIDDFIDPTGWKNWSGDLGLNTLYYGEYGNYGPGAGTENRVNW
KGHHVMDYYDASNFTVQEFIAGDEWLQARINQLKIEFHTIQKGSDSIDKY
LLRLKAIQDQLVSAGERITDNDVVITALSGLPPEFDIVKAVVLARETSIP
LKDFRAQLIGVESAMEARVXTLASGMAAMYVQGDKVTGGNQNSGYSQGES
SNAGSRIGDIQGYQGNNRFQNRNGYNTSQGSNTSQNYNRNGYGSFNNSRP
YYNGNRQRWGNNYNSSSTGNRSSWNGNTTFKTGPIVECQICSRRGHTAAN
CSNRSDGYQVIICQICGKKGHNALECRHRNNYSYQGAPPPPSLTAFSAQA
PSHMTAAEYGQNVQHFSAADTWVLDTGASHHMTSNLGNLNQPVQYNGDEK
ITIGNGEGLTVHHIGSTTLSTPQHLLFLKNVLHDKATGMMLYHGXSRGEL
YEXPVTVFSRRLVAGPNKAVALLGKAVKTSIWHKRLGHPSAEVLDVMLRT
VGQPVSADSSPSVCSSCLSGKMCRQPFPVKETRASFMFEKVHSDIWGPAP
VKSREGFRYYIFGSAVYPFLRPYTKHKLQPRSKQCVFLGFVAGYKGVVCY
DLSSTKLVLSRHVVHDETTFPFKTSLQVSYGKFNTVQSTTMSXIIVPIPC
FGSDXPASPTHXESYANPEIVEDQSMDNLXVPSSSSQDSPNLXAHTHSSP
TLSTSTPSTISLLPVHSPSQLEVLPPISSSVVDTNEESAHHMVTRLKSGA
ISRRSYTGYIGSFPELQTLQLDNECDFTGGFSFVAAIKDLEEPSTFRKAS
TSPHWQTAMQEEFNALKTQGTWQLNDDKDVVVLLLYVDDIILTGSNAXKV
QQVIDDLADIHLTSVKRIIRYLQGTAECGLTYAADTDIHLTAFSDADWAA
DLNTRQSVTGYVVYLGGNPISWQSKKQSSVSRSSTEAEYKALAHTAADVA
WIRLLLKDLGVALPVQPTIFCDNKSAIALIRGMNVISEGSAREMRLEGKK
GKDPFLSSPTNF

mRNA from alignment at chr15:15481139..15490755+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000267128 ID=MDP0000267128; Name=MDP0000267128; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr15:15481139..15490755+ (Malus x domestica

mRNA from alignment at MDC001776.406:11065..20681+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000267128 ID=MDP0000267128; Name=MDP0000267128; organism=Malus x domestica; type=mRNA; length=9617bp; location=Sequence derived from: MDC001776.406:11065..20681+ (Malus x domestica
ATGGCTTCCTCCACTCCAAAATTGCTGCAGCTCCTCTGCATAATCTTATT
TCTCCACATTTCTTCTTCTTCGTCATCGTCAAACACAACTACTTTTAATC
CCCATTTGGCGTCCCTAAGATCATTCTGCAAGTCCGCACCCTACCCAGAC
ATCTGCTTCGACTCGTTGAAGCTCTCAATCTCAATAAACATCACCCCCAA
CATCATCTCCTACCTCCTCCATTCCCTCCAAGTCGCGATCTCCGAAGCCG
GAAAGCTCACCGATCTCTTCTACAAGGCTGGACAGTACCCAAACATCGTC
GAGAAGCAAAAGGGAGCTGTCCAGGACTGCAAGGAGCTCCACCAAATCAC
TCTCTCTTCCTTACAAAGATCTGTGTCTCAAGTCCAAGCGGGAAACGCCA
AGAAACTCAACGATGCTAGGGCTTACCTCAGCGCCGCTCTCACAAACAAG
AACACTTGCATGGAAGGGTTGGATTCTGCTTCTGGCCCTATGAAGCCAAC
CCTAGTTAACTCCTTGACTAGCACATACAAATATGTAAGCAATTCTCTCT
CAGCTATCTCAAAACAAGGGACCAATAAAGGGCGCACAAATCGCCGTCTC
ATGAGCATTCCGAGGTGGTTGTCGAGGAGAGACCGGCGGATATTGGAGAG
TTCCGGTGACGAATATGACCCCAGGGAAGTCCTAACGGTTGCCGCGGATG
GATCAGGGAACTTCACCACAATTAGTGATGCTATTATTTTTGCTCCAAAT
AATAGTTATGATAGGACGATTATATATGTTAAAGAAGGGGTTTATGAAGA
AAATGTGGAGATTCCGAGCTACAAGACCAACATTGTTCTTCTTGGAGATG
GAAGTGACATCACTTTCATCACTGGTAACCGGAGTGTTGTTGATGGATGG
ACTACATTCAGATCTGCAACCGTCGGTAATTAATATTTCTAAATGCATTC
CTTGCTATCTTCAATTTACTGTCTTCTTCTTCCCCTATACTGGAGTCATA
TGTCAATGTCAGTCTTGTGGTGAGAAGATGCTTGACGATACTTTTGTGGT
CAAACATGCTATCAGTCTCACTCTCAGTCCAAATCGAACTTTTCATCTGA
TTTTGTTTAATTTTGTTCATACGCGTTTGTGTGAAAGGGTGACAAAGTCA
TCTAAAATTCTTATTTAAGAATTGAACAAGCTCAATGTTTTTAACTGACC
TTTTCAATCTAACATATGAGCAAATTTTGGTCAAAATCAAGATAAAAAGT
TTGATTTGGATATTACTGACATTTCCAACCCCACCACAATGAGGATTAGT
GCAATATAAGAAAATCCTCAATGGTACTATTGTGGTTAAACTTGTTATTA
GTCCAAATCAAACTTCCTATCTGTATTTTATCTATTCCACTTATTTACGT
GTTTCGTGTGAGAGGGTCAAAAGGTCATTTCAAGTCTTATCAACAGTCAA
CGTACAAGATTCAATGTCTTAAAATTGTTTCACCCGTCACGAGATGCACA
CATGATAAAAGTTAGACAAGGTTATGATAAAAATCTTAATTTGGACTGAG
ATCGATAACATGCTTAATCGTAGGGGATATTAGTGCAATTTTTAAAAAAT
CATGTTTACATTTGATAACCTTTCATGAATTCATTCCCAGTTTGTTTAAC
CCAACCAACATTCTCAATTTTTCCAGCTGTGTCCGCAGAGGGCTTTCTAG
CAAGAGACATAACAATTCGGAACACGGCAGGGCCAATAAAGCACCAAGCA
GTTGCTCTGAGAATTAATGCAGACTTGGCTGCAATTTACAAATGCACCAT
CGATGGCTACCAAGACACATTATACGTACACTCTTTTAGACAATTCTATA
GAGAGTGCGACATATTCGGAACCATAGACTACATATTTGGTAACGCCGCA
GTTGTATTTCAAGCATGCAACATCGTGTCGAAAATGCCAATGCCGGGACA
ATTCACAGTCGTCACAGCACAGTCCAGGGAGACACCAGATCAGAACACAG
GAATCTCCGTGCAGAACTGCTCCATTATTGCCACTGATGAGTTGTACTCC
AATTCCAGCATTGTCAAAAGCTACTTAGGCCGGCCGTGGAAGAATTACTC
TACGACTGTTGTCCTGGAGTCCTACATTGACGACTTTATTGACCCGACTG
GGTGGAAAAATTGGTCCGGGGACCTAGGGTTGAACACTTTGTACTATGGA
GAGTATGGGAATTATGGTCCTGGCGCTGGGACGGAAAATAGAGTGAACTG
GAAAGGACATCATGTTATGGACTATTATGATGCATCCAATTTCACTGTGC
AAGAGTTTATTGCTGGTGATGAATGGCTGCAGTACACTTCATTTCCTTAT
GATGATGGCATCTGATCTCTGTATGAATACTTTTGTTTGAAATAGTTTTT
TACAACAATTTAAAAATATGTGCATCAAAGGTGAAGTTGCATGGATGTGG
TGAAATATTTTCTTATTTTTTAGGGATATAGGGGGAGGGGGTATTTTCTG
ATTGGATGTTCTACACTTTGGACAGTTCAAAGTTCAAACCATGAACCCCA
AATAAAAAGCTAACAATTTGACCACTGGCCTCATGATTCTAAAGGAAATT
TGGTAAGTTAAACAAATATAGGCACTCGACGCCGCTCCATAATTTTGAGC
TCTCACAAGAACCCTTGAGTAGTTTATCGGTGAATTTTTTTTTTKGKCAA
TACGACATTCTAAATTACTATAATCTGTAAGAAAAGAAATCCAAACTTTA
GTACAAGAAAATTGACAGATTGCCCTAACTAATTGTCCAAATCCATGTGT
GCTAGTTAAAACTCTAAAGAAAAAGAAATGCTATTTTTAAAAAATTCATG
TGATTTTCTAATCCATCAATGACTTTAACTCTTTCAATGTATGTTGTGCT
TGTGCACATAACTTGTCAAGTAATATGATTAAAATGTGGTACACAAATGT
ACTCTCCATGTCATCACTGTATTCGTAATCGGCCAGTAATGACCATATTA
ACCTACCCTGTGACCATGGGTGGATTCATAGAGGGACCGGGGTGGTCCCA
AACCACTTGACATCTGGGAAAAACGTCTATGGAGGTCCTTCGAGGACCCT
CCAAATGTTTGGGCTGGGAGGACCATTCCATTCCTAGCTGTTATAAGTTT
CTACAGTTTAAGCAGTTTTATTTGTATTGTTAAATGCCATAAAGTTATAA
GCCTTATAATCTAAGCAATTTCTTTCAAGAAGGGTGAATGGGTTGCAGGC
TTGCAGAACACTCATTCGGAAGAAGACCCAAACGGTACGATTTTTTTAAG
GGAACATACTTTTTTTTTTTTTTTTATATAAATGACCTTGCTAAAAAAGA
CGCTTACAGTTTAGATTTCGTAACTTGTAATATTATTTTTAGGGGTGTGT
GCCTGTTAACTTATGTTCTTTGATTTTCTTCAATACATATGATTTAACGG
TTGAAAATTAGAAAAATGTGTGAGAAGTAAAAAGACGTGTGTATATATCA
CACCCCTATTTTTAAACCTTTTACATTGGAACCTCTCGACCTTAAAATTT
TGAATCGGCCCCTGTGTTGACTGATAATAATTGACTCAAGTGAATGCCAC
ATCATCTGCCACATCATCTGCCATGTCATTCATATTTCTGTTGAAAGTTA
GTTAGGATGGTGCTGTGTAGCTTACACAGTAAGCAAGGTAGTTAGGCTAC
TATAGGGATATAAAAAGCTGATTGCAGCTTATTGTTTGTAAGAAAAATAT
CATTCTATCAATACAAAACCTTTCATATTCTTTCTAAGTTTTCTTCTATA
TTCTCTGTATTGTTTCTTTCTTTTTCTTTCTGCAAGTCTGATCTTCTTGG
TTAAGATGGTATCGAGCCAAGGTTGATTTTTTTTTTTCTGGGTATTTTCT
TCCGCTGAGAAATTCTTTGGGATCGATCGTTGAAGGCTGTGGTGGAGTTC
TTGGAGGATTGGTGAAGTGCTTGAACGCTTGCTGATGAATTTTGGGTTGA
GGGTCATTCAATCARGTTGTTGGTTTCTTTCCTTATTCTTTGCACATCAA
GTGTTTGCGTTTTTGCTTCAGTGAAGATATATGGTGAATTGGAATGTTTT
CTTTGGTTTTTCATATATGGGTTATGTGTTGGATTTGATTAAGGCTGATG
CCAAGATTTGTTGAAGATAGACGAATTATAGTTGTGGTGTGATATGATTA
CAGTTGTTCATTTGMGAAATTGCTGGAATTTCAGYKTTTGAAGTATATAC
ATATAGAAGGCCGATGCCAWGAAGTAGTGAGAATATATTGAAGAGGTGAT
CATTGTTGAAGTTTGGAGTTAAACATATTTGTGATTGAGATTGATTTCTT
GTCAGTACTTTGTGATAAAGATGTCTGATAAATCAGTACGCATTGAAAGT
TTGCTTGGTATGTTGACTGTGAAGTTGCAAGATGACAATTTTGTTAAGTG
GAATTATCAGTTTCAGTCGGTTTTACGAGGGTATGATTTCTTTGAATTCT
TTACTGGTGAGTCTCCTTGTCCACCAAAGTTTGTGGTTAACACTGAGAAT
GGAGTGACTACAGAAWTCACAGCAGCTTATAAATCTTGGGTTCAGAAAGA
TATGGCCCTATTGAGTCTGTTAATTGCTACTTTGTCGGATGATGCTATGG
AATATGTAATAGGGTGTAAAACGTCTCATGAAGCTTGGATAAATTTACAA
GACCGTTATGCGTCTGTGTCCAGGGCTAGGATTAATCAACTCAAAATTGA
GTTTCATACAATTCAAAAAGGCAGTGATTCTATTGACAAGTATTTGCTTC
GGTTGAAAGCCATTCAGGATCAGCTTGTGTCTGCAGGGGAGAGGATTACT
GATAATGATGTTGTTATTACTGCTTTATCTGGATTACCACCGGAGTTTGA
TATTGTCAAGGCTGTAGTTTTAGCAAGGGAGACTTCTATTCCGCTGAAAG
ATTTCAGAGCGCAGTTGATTGGTGTTGAATCTGCTATGGAAGCAAGGGTC
TYTACGCTGGCAAGTGGCATGGCTGCAATGTATGTTCAAGGAGATAAGGT
CACAGGTGGTAATCAGAATTCCGGGTATTCACAAGGAGAGAGTTCAAATG
CAGGATCCCGAATTGGTGATATTCAAGGCTATCAAGGGAACAACAGGTTT
CAAAACAGAAATGGGTATAATACTTCTCAGGGGTCTAATACTTCTCAGAA
CTACAACAGAAATGGTTATGGGTCTTTCAATAATTCAAGGCCTTATTATA
ATGGGAATAGACAGAGATGGGGAAACAACTATAATAGTTCTTCTACTGGG
AATCGGTCTTCTTGGAATGGTAATACTACCTTCAAAACAGGTCCTATAGT
TGAATGTCAGATTTGTTCTCGCAGAGGTCATACTGCTGCAAACTGTTCGA
ATAGGAGTGATGGTTATCAGGTTATAATCTGTCAAATTTGTGGAAAGAAA
GGTCATAATGCTCTGGAATGTAGACATCGGAATAACTATTCCTATCAGGG
GGCACCTCCACCTCCTTCTCTTACTGCATTTTCTGCTCAAGCTCCGTCTC
ACATGACTGCTGCAGAATATGGTCAGAATGTTCAACATTTCTCTGCTGCT
GATACATGGGTKTTGGATACAGGTGCTTCACACCATATGACATCWAATCT
TGGGAATCTAAATCAACCTGTGCAGTACAATGGTGATGAGAAAATCACTA
TTGGTAATGGGGAAGGTTTGACTGTTCATCATATTGGTTCTACAACACTT
TCAACTCCACAACATTTATTGTTTCTCAAGAATGTTTTACATGTTCCAAC
YATTACTGTTAATCTCTTATCTGTTAAGAAATTATGTGAAGATAATCATT
GCTGGTTCATATGTGATGAGAGTATATTTTTTATACAGGACAAGGCAACA
GGAATGATGTTGTACCACGGCCAKAGTAGGGGAGAGCTATATGAGRTTCC
TGTGACTGTGTTTTCGAGAAGATTGGTKGCTGGTCCGAATAAAGCTGTTG
CATTACTTGGGAAAGCTGTAAAGACTTCTATTTGGCATAAGAGGCTTGGG
CATCCATCTGCAGAAGTGCTTGATGTTATGCTTAGAACTGTTGGACAGCC
TGTTAGTGCAGATTCCTCACCTTCTGTTTGTTCTTCATGTCTTTCTGGAA
AAATGTGTAGACAACCCTTTCCTGTCAAAGAAACTAGGGCTAGTTTTATG
TTTGAAAAAGTACATTCTGATATTTGGGGGCCTGCTCCAGTTAAGTCTCG
AGAAGGGTTTAGATACTATGTAAGTTTTGTGGATGAGTTCTCAAGATTTG
TATGGATCTTCCCTATTATCAATAAATCTGATGTTTTCCAAGTATTTGTC
AAGTTTTTKKCATTTGTTACAACTCAGTTTAATTCTGTAATTAAGTGTTT
ACAGACAGATGGTGGTTCTGAATATATGAGTAACAGGTTTCAGTCCTTTT
TGGCATTCAAAGGCACTGCACATTCCATATCATGCCCTTACACACCTCAG
CAGAATGGTCTTGCTGAGAGGAAACATAGGCACATCGTAAAGACTGCAAT
CACACTTTTAACAGAGGCTGAAGTTCCATTACAGTTCTGGAATTATGCTT
GTAATCATGCTGCTTTTCTGATCAACCGAATGCCGTGTAAGGTTTTGGGG
ATGAAGTCTCCATATCAGATTCTGTTTAAACAAGACCCTGTGTTGCATAC
WTTGAAGATATTTGGATCTGCAGTTTATCCATTCTTAAGGCCATATACTA
AACATAAATTGCAACCTCGGTCTAAGCAGTGTGTTTTTCTTGGTTTTGTR
GCTGGATATAAAGGGGTAGTCTGCTATGATTTGAGTAGTACTAAACTAGT
ATTGTCCAGACATGTGGTGCATGATGAGACTACATTTCCATTTAAAACAA
GYTTGCAGGTGTCTTATGGGAAGTTCAATACAGTCCAGAGTACAACAATG
TCTCYAATCATTGTTCCAATACCATGTTTTGGTTCTGATYCCCCAGCTTC
TCCAACCCATGYCGAGTCATATGCCAATCCAGAAATTGTGGAAGACCAAT
CAATGGATAACTTACAMGTTCCAAGCTCATCAAGTCAAGATTCTCCGAAT
CTCYCTGCTCATACTCATAGCTCTCCTACTCTCTCAACATCAACTCCAAG
TACAATATCATTGTTGCCTGTCCATAGTCCTTCTCAGTTAGAGGTACTAC
CACCAATCTCTTCTTCTGTGGTTGACACTAATGAAGAATCAGCTCACCAT
ATGGTCACCAGGTTGAAGTCCGGTGCCATTTCAAGAAGATCTTACACAGG
TTATATTGGTTCATTTCCAGAATTACAAACTCTACAGTTGGATAATGAAT
GTGATTTTACTGGGGGTTTTTCATTTGTTGCTGCAATAAAAGATTTGGAG
GAACCATCAACATTCCGAAAAGCTTCTACAAGCCCACATTGGCAAACTGC
AATGCAAGAGGAGTTTAATGCCCTCAAAACTCAAGGAACTTGGCAGTTGG
TTCCTTCTCCACCAAACAGAACCATTATTGGCAGTAAGTGGGTATATAAA
GTTAAGAAGAATCCTGATGGAAGTGTATCGAGGTATAAAGCCAGACTTGT
GGCTCAAGGTTTTTCCCAAGAACAAGGCATTGACTACTCAGAAACTTTTA
GTCCAGTAGTACGCCACACTACTGTACGACTCATTTTATCCTTAGCAGCT
ATAAATAAATGGGAATTGAGGCAGTTAGATATCAAAAATGCATTTCTGCA
TGGTGACTTACAAGAAGAGGTGTATATGAAACAGCCTCAAGGGTTTGTTG
ATCAAACTMAACCCCATTATGTCTGCAAGTTGATTAAATCGTTGTATGGG
TTGAAGCAAGCCCCTCGGGCATGGAATTCAAAGTTCACAACCTATTTACC
AGCTTTGGGATTTATACCCTCTTCATCGGATACCAGTTTGTTTGTGAAGA
ATGATGACAAGGATGTGGTGGTTCTTTTACTATATGTCGATGACATCATT
TTGACAGGATCAAATGCTARCAAAGTTCAGCAAGTTATCGATGATTTGGC
AGGTGTTTTTGACTTAAAGGATATGGGCAGACTTACTTACTTCCTGGGAC
TTCAGATTCAATACAAGGAGAATGGAGACATATTTGTGAATCAATCCAAG
TATGTTAAAGATCTTATTCATAAAGCTGGAATGGAGTCTTGTAAACCTGC
GAATACACCATGCAAACCTCACAATCAGATGCTATTGAATGAGGGCATAC
CATTGCAGGACTCCACATTGTACCGAAGTTTGGTTGGTTCCCTGCAATAT
CTCACTTTTACACGTCCAGATATAGCTTATGCTGTGAATTCCGTGTGTCA
ATTTATGACTGCTCCGACAGATATACATCTTACTTCTGTCAAACGAATTA
TTCGATATCTTCAAGGCACTGCCGAATGTGGTCTTACATATGCAGCTGAT
ACTGACATACATTTGACAGCGTTTTCTGATGCTGATTGGGCTGCTGATTT
GAACACAAGACAATCTGTGACTGGTTATGTGGTTTATCTTGGTGGGAATC
CAATCTCTTGGCAGTCAAAGAAGCAATCCTCTGTCTCTCGCAGTTCTACA
GAGGCGGAATACAAGGCACTTGCTCATACTGCAGCAGATGTGGCATGGAT
TCGGCTCCTTTTGAAAGATTTGGGAGTTGCATTACCTGTTCAACCCACTA
TATTCTGTGATAATAAATCCGCAATAGCACTCAGTGCTAATCCGGTGTAT
CATTCGAGAATCAAACACCTTGATACGGATTATCATTTTGTCCGTGAAAG
GGTGCATCATGGTGATCTGTTGGTTGAGTATCTCCCTACTAATGAACAGA
CCGCTGATATTCTTACTAAAGGATTACATAGTCCGCCATTCACTCGTCAT
TGTTTCAATCTCAAACTTGGTTTCCCTCGTTGAGATTGAGGGGGGATGTT
GACTGATAATAATTGACTCAAGTGAATGCCACATCATCTGCCACATCATC
TGCCATGTCATTCATATTTCTGTTGAAAGTTAGTTAGGATGGTGCTGTGT
AGCTTACACAGTAAGCAAGGTAGTTAGGCTACTATAGGGATATAAAAAGC
TGATTGCAGCTTATTGTTTGTAAGAAAAATATCATTCTATCAATACAAAA
CCTTTCATATTCTTTCTAAGTTTTCTTCTATATTCTCTGTATTGTTTCTT
TCTTTTTCTTTCTGCAAGTCTGATCTTCTTGGTTAAGACCCTGCTCGTGA
CGTGATAAAATTGATATGTCGATTAGCACTAAATAATAACAAATCTAGTC
AAAATGTTACCCTTCTAGCATGATTTGTTCTTTAATTAGTTGAAGAATGT
TGAGAATAGCCAAATATATATAATATATATAATGCTTGACTGGCTTAGTC
CATTGATTGGAGTCATGAGTTTGTTATGACTTCAATCCTAACCTCACAAA
AGAACACACACAACCATGAATTCGTTGACAATTTTGAACAACATATGTTC
ATACGTTGTTTGGCAGTAAGGGGTATGAATGTAATTTCGGAAGGATCCGC
GAGGGAAATGCGGTTGGAAGGGAAGAAAGGAAAGGACCCCTTCTTGTCGT
CTCCAACTAACTTTTGA

Coding sequence (CDS) from alignment at MDC001776.406:11065..20681+

>MDP0000267128 ID=MDP0000267128; Name=MDP0000267128; organism=Malus x domestica; type=CDS; length=4389bp; location=Sequence derived from: MDC001776.406:11065..20681+ (Malus x domestica
ATGGCTTCCTCCACTCCAAAATTGCTGCAGCTCCTCTGCATAATCTTATT
TCTCCACATTTCTTCTTCTTCGTCATCGTCAAACACAACTACTTTTAATC
CCCATTTGGCGTCCCTAAGATCATTCTGCAAGTCCGCACCCTACCCAGAC
ATCTGCTTCGACTCGTTGAAGCTCTCAATCTCAATAAACATCACCCCCAA
CATCATCTCCTACCTCCTCCATTCCCTCCAAGTCGCGATCTCCGAAGCCG
GAAAGCTCACCGATCTCTTCTACAAGGCTGGACAGTACCCAAACATCGTC
GAGAAGCAAAAGGGAGCTGTCCAGGACTGCAAGGAGCTCCACCAAATCAC
TCTCTCTTCCTTACAAAGATCTGTGTCTCAAGTCCAAGCGGGAAACGCCA
AGAAACTCAACGATGCTAGGGCTTACCTCAGCGCCGCTCTCACAAACAAG
AACACTTGCATGGAAGGGTTGGATTCTGCTTCTGGCCCTATGAAGCCAAC
CCTAGTTAACTCCTTGACTAGCACATACAAATATGTAAGCAATTCTCTCT
CAGCTATCTCAAAACAAGGGACCAATAAAGGGCGCACAAATCGCCGTCTC
ATGAGCATTCCGAGGTGGTTGTCGAGGAGAGACCGGCGGATATTGGAGAG
TTCCGGTGACGAATATGACCCCAGGGAAGTCCTAACGGTTGCCGCGGATG
GATCAGGGAACTTCACCACAATTAGTGATGCTATTATTTTTGCTCCAAAT
AATAGTTATGATAGGACGATTATATATGTTAAAGAAGGGGTTTATGAAGA
AAATGTGGAGATTCCGAGCTACAAGACCAACATTGTTCTTCTTGGAGATG
GAAGTGACATCACTTTCATCACTGGTAACCGGAGTGTTGTTGATGGATGG
ACTACATTCAGATCTGCAACCGTCGCTGTGTCCGCAGAGGGCTTTCTAGC
AAGAGACATAACAATTCGGAACACGGCAGGGCCAATAAAGCACCAAGCAG
TTGCTCTGAGAATTAATGCAGACTTGGCTGCAATTTACAAATGCACCATC
GATGGCTACCAAGACACATTATACGTACACTCTTTTAGACAATTCTATAG
AGAGTGCGACATATTCGGAACCATAGACTACATATTTGGTAACGCCGCAG
TTGTATTTCAAGCATGCAACATCGTGTCGAAAATGCCAATGCCGGGACAA
TTCACAGTCGTCACAGCACAGTCCAGGGAGACACCAGATCAGAACACAGG
AATCTCCGTGCAGAACTGCTCCATTATTGCCACTGATGAGTTGTACTCCA
ATTCCAGCATTGTCAAAAGCTACTTAGGCCGGCCGTGGAAGAATTACTCT
ACGACTGTTGTCCTGGAGTCCTACATTGACGACTTTATTGACCCGACTGG
GTGGAAAAATTGGTCCGGGGACCTAGGGTTGAACACTTTGTACTATGGAG
AGTATGGGAATTATGGTCCTGGCGCTGGGACGGAAAATAGAGTGAACTGG
AAAGGACATCATGTTATGGACTATTATGATGCATCCAATTTCACTGTGCA
AGAGTTTATTGCTGGTGATGAATGGCTGCAGGCTAGGATTAATCAACTCA
AAATTGAGTTTCATACAATTCAAAAAGGCAGTGATTCTATTGACAAGTAT
TTGCTTCGGTTGAAAGCCATTCAGGATCAGCTTGTGTCTGCAGGGGAGAG
GATTACTGATAATGATGTTGTTATTACTGCTTTATCTGGATTACCACCGG
AGTTTGATATTGTCAAGGCTGTAGTTTTAGCAAGGGAGACTTCTATTCCG
CTGAAAGATTTCAGAGCGCAGTTGATTGGTGTTGAATCTGCTATGGAAGC
AAGGGTCTYTACGCTGGCAAGTGGCATGGCTGCAATGTATGTTCAAGGAG
ATAAGGTCACAGGTGGTAATCAGAATTCCGGGTATTCACAAGGAGAGAGT
TCAAATGCAGGATCCCGAATTGGTGATATTCAAGGCTATCAAGGGAACAA
CAGGTTTCAAAACAGAAATGGGTATAATACTTCTCAGGGGTCTAATACTT
CTCAGAACTACAACAGAAATGGTTATGGGTCTTTCAATAATTCAAGGCCT
TATTATAATGGGAATAGACAGAGATGGGGAAACAACTATAATAGTTCTTC
TACTGGGAATCGGTCTTCTTGGAATGGTAATACTACCTTCAAAACAGGTC
CTATAGTTGAATGTCAGATTTGTTCTCGCAGAGGTCATACTGCTGCAAAC
TGTTCGAATAGGAGTGATGGTTATCAGGTTATAATCTGTCAAATTTGTGG
AAAGAAAGGTCATAATGCTCTGGAATGTAGACATCGGAATAACTATTCCT
ATCAGGGGGCACCTCCACCTCCTTCTCTTACTGCATTTTCTGCTCAAGCT
CCGTCTCACATGACTGCTGCAGAATATGGTCAGAATGTTCAACATTTCTC
TGCTGCTGATACATGGGTKTTGGATACAGGTGCTTCACACCATATGACAT
CWAATCTTGGGAATCTAAATCAACCTGTGCAGTACAATGGTGATGAGAAA
ATCACTATTGGTAATGGGGAAGGTTTGACTGTTCATCATATTGGTTCTAC
AACACTTTCAACTCCACAACATTTATTGTTTCTCAAGAATGTTTTACATG
ACAAGGCAACAGGAATGATGTTGTACCACGGCCAKAGTAGGGGAGAGCTA
TATGAGRTTCCTGTGACTGTGTTTTCGAGAAGATTGGTKGCTGGTCCGAA
TAAAGCTGTTGCATTACTTGGGAAAGCTGTAAAGACTTCTATTTGGCATA
AGAGGCTTGGGCATCCATCTGCAGAAGTGCTTGATGTTATGCTTAGAACT
GTTGGACAGCCTGTTAGTGCAGATTCCTCACCTTCTGTTTGTTCTTCATG
TCTTTCTGGAAAAATGTGTAGACAACCCTTTCCTGTCAAAGAAACTAGGG
CTAGTTTTATGTTTGAAAAAGTACATTCTGATATTTGGGGGCCTGCTCCA
GTTAAGTCTCGAGAAGGGTTTAGATACTATATATTTGGATCTGCAGTTTA
TCCATTCTTAAGGCCATATACTAAACATAAATTGCAACCTCGGTCTAAGC
AGTGTGTTTTTCTTGGTTTTGTRGCTGGATATAAAGGGGTAGTCTGCTAT
GATTTGAGTAGTACTAAACTAGTATTGTCCAGACATGTGGTGCATGATGA
GACTACATTTCCATTTAAAACAAGYTTGCAGGTGTCTTATGGGAAGTTCA
ATACAGTCCAGAGTACAACAATGTCTCYAATCATTGTTCCAATACCATGT
TTTGGTTCTGATYCCCCAGCTTCTCCAACCCATGYCGAGTCATATGCCAA
TCCAGAAATTGTGGAAGACCAATCAATGGATAACTTACAMGTTCCAAGCT
CATCAAGTCAAGATTCTCCGAATCTCYCTGCTCATACTCATAGCTCTCCT
ACTCTCTCAACATCAACTCCAAGTACAATATCATTGTTGCCTGTCCATAG
TCCTTCTCAGTTAGAGGTACTACCACCAATCTCTTCTTCTGTGGTTGACA
CTAATGAAGAATCAGCTCACCATATGGTCACCAGGTTGAAGTCCGGTGCC
ATTTCAAGAAGATCTTACACAGGTTATATTGGTTCATTTCCAGAATTACA
AACTCTACAGTTGGATAATGAATGTGATTTTACTGGGGGTTTTTCATTTG
TTGCTGCAATAAAAGATTTGGAGGAACCATCAACATTCCGAAAAGCTTCT
ACAAGCCCACATTGGCAAACTGCAATGCAAGAGGAGTTTAATGCCCTCAA
AACTCAAGGAACTTGGCAGTTGAATGATGACAAGGATGTGGTGGTTCTTT
TACTATATGTCGATGACATCATTTTGACAGGATCAAATGCTARCAAAGTT
CAGCAAGTTATCGATGATTTGGCAGATATACATCTTACTTCTGTCAAACG
AATTATTCGATATCTTCAAGGCACTGCCGAATGTGGTCTTACATATGCAG
CTGATACTGACATACATTTGACAGCGTTTTCTGATGCTGATTGGGCTGCT
GATTTGAACACAAGACAATCTGTGACTGGTTATGTGGTTTATCTTGGTGG
GAATCCAATCTCTTGGCAGTCAAAGAAGCAATCCTCTGTCTCTCGCAGTT
CTACAGAGGCGGAATACAAGGCACTTGCTCATACTGCAGCAGATGTGGCA
TGGATTCGGCTCCTTTTGAAAGATTTGGGAGTTGCATTACCTGTTCAACC
CACTATATTCTGTGATAATAAATCCGCAATAGCACTCATAAGGGGTATGA
ATGTAATTTCGGAAGGATCCGCGAGGGAAATGCGGTTGGAAGGGAAGAAA
GGAAAGGACCCCTTCTTGTCGTCTCCAACTAACTTTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000070	Pectinesterase_cat
IPR001878	Znf_CCHC
IPR006501	Pectinesterase_inhib_dom
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018040	Pectinesterase_Tyr_AS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity
GO:0003676	nucleic acid binding
GO:0008270	zinc ion binding
GO:0004857	enzyme inhibitor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification