MDP0000290099, MDP0000290099 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000290099
Unique Name	MDP0000290099
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	10313

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr2	chromosome	chr2:32803266..32813578 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC010657.494	contig	MDC010657.494:3898..14210 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
KEGG/KAAS of Malus x domestica Whole Genome v1.0	2012-04-02

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000290099_exon_1	MDP0000290099_exon_1	Malus x domestica	CDS
MDP0000290099_exon_2	MDP0000290099_exon_2	Malus x domestica	CDS
MDP0000290099_exon_3	MDP0000290099_exon_3	Malus x domestica	CDS
MDP0000290099_exon_4	MDP0000290099_exon_4	Malus x domestica	CDS
MDP0000290099_exon_5	MDP0000290099_exon_5	Malus x domestica	CDS
MDP0000290099_exon_6	MDP0000290099_exon_6	Malus x domestica	CDS
MDP0000290099_exon_7	MDP0000290099_exon_7	Malus x domestica	CDS
MDP0000290099_exon_8	MDP0000290099_exon_8	Malus x domestica	CDS
MDP0000290099_exon_9	MDP0000290099_exon_9	Malus x domestica	CDS
MDP0000290099_exon_10	MDP0000290099_exon_10	Malus x domestica	CDS
MDP0000290099_exon_11	MDP0000290099_exon_11	Malus x domestica	CDS
MDP0000290099_exon_12	MDP0000290099_exon_12	Malus x domestica	CDS
MDP0000290099_exon_13	MDP0000290099_exon_13	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000290099	MDP0000290099	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000306	Zinc finger, FYVE-type	PFAM	PF01363	FYVE	coord: 771..837 score: 7.7
IPR000306	Zinc finger, FYVE-type	SMART	SM00064	Protein present in Fab1, YOTB, Vac1, and EEA	coord: 769..838 score: 1.3
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 427..440 score: 1.4e-15coord: 446..462 score: 1.4e-15coord: 496..512 score: 1.4e-15coord: 537..553 score: 1.4e-15coord: 553..567 score: 1.4e-15coord: 656..674 score: 1.4e-15coord: 714..735 score: 1.4
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 444..492 score: 1.9e-09coord: 495..547 score: 7.4e-09coord: 551..599 score: 3.7e-12coord: 614..663 score: 3.6e-14coord: 667..715 score: 3.4e-05coord: 720..767 score: 2.7
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 430..440 score: NAcoord: 537..547 score: NAcoord: 589..599 score
IPR000408	Regulator of chromosome condensation, RCC1	PROFILE	PS50012	RCC1_3	coord: 382..443 score: 10.404coord: 444..495 score: 14.283coord: 496..550 score: 12.976coord: 551..602 score: 13.197coord: 615..666 score: 15.429coord: 667..718 score: 12.635coord: 719..770 score: 14
IPR009091	Regulator of chromosome condensation/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30	no description	coord: 382..771 score: 1.2e
IPR009091	Regulator of chromosome condensation/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 382..774 score: 2.5
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 774..842 score: 1.2
IPR011993	Pleckstrin homology-like domain	GENE3D	2.30.29.30	no description	coord: 138..251 score: 3.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	no description	coord: 772..839 score: 9
IPR013591	Brevis radix-like domain	PFAM	PF08381	BRX	coord: 1119..1175 score: 2.7
IPR013591	Brevis radix-like domain	PROFILE	PS51514	BRX	coord: 1120..1175 score: 34
IPR017455	Zinc finger, FYVE-related	PROFILE	PS50178	ZF_FYVE	coord: 775..837 score: 11
None	No IPR available	COIL	coil	coiled-coil	coord: 959..987 score: NAcoord: 1015..1036 score
None	No IPR available	GENE3D	3.40.50.2300	no description	coord: 29..99 score: 3.3
None	No IPR available	PANTHER	PTHR22870	FAMILY NOT NAMED	coord: 148.
None	No IPR available	PANTHER	PTHR22870:SF25	REGULATOR OF CHROMOSOME CONDENSATION-RELATED	coord: 148.
None	No IPR available	PFAM	PF13713	BRX_N	coord: 1010..1046 score: 7
None	No IPR available	SEG	seg	seg	coord: 7..18 score: NAcoord: 128..139 score: NAcoord: 359..371 score: NAcoord: 397..408 score: NAcoord: 450..460 score: NAcoord: 606..614 score: NAcoord: 844..855 score: NAcoord: 924..949 score
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 133..244 score: 3.1
None	No IPR available	SEG	seg	seg	coord: 8..39 score
None	No IPR available	SEG	seg	seg	coord: 38..47 score
None	No IPR available	SEG	seg	seg	coord: 5..19 score
None	No IPR available	SEG	seg	seg	coord: 55..79 score: NAcoord: 80..96 score
None	No IPR available	SEG	seg	seg	coord: 2..26 score
None	No IPR available	SEG	seg	seg	coord: 33..47 score
None	No IPR available	SEG	seg	seg	coord: 1..17 score: NAcoord: 28..53 score
None	No IPR available	SEG	seg	seg	coord: 16..27 score
None	No IPR available	SEG	seg	seg	coord: 28..39 score: NAcoord: 92..102 score: NAcoord: 106..118 score
None	No IPR available	SEG	seg	seg	coord: 33..49 score
None	No IPR available	SEG	seg	seg	coord: 114..126 score: NAcoord: 130..139 score
None	No IPR available	SEG	seg	seg	coord: 56..67 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:32803266..32813578+
mRNA from alignment at MDC010657.494:3898..14210+
coding sequence from alignment at MDC010657.494:3898..14210+

mRNA sequence

>MDP0000290099 ID=MDP0000290099; Name=MDP0000290099; organism=Malus x domestica; type=mRNA; length=10313bp
ATGATTTCAAAGTTTGGATGCGYTCCTTTGCTGCTTTGTATGCTCGTCAT
GCTTATCGATACGTCARTATGATATGTTATTAGATTGGCCAAACTGGCTT
TGTTTTTCGCTTTCGAGTCTTTTTAGTTTGAGAACCTTTTGGATTTTAAC
CAGGGCACCTTTTTTAAGTTTGTACCTTATTTTTAAGAAAGTTTTGTACT
TTTCTTTAAATTCTTATTAAACCACTATCGTTTTACCTAAAAACAAATAA
GATTTTGATTTATTTTATGGAAAATATTGATTATGTTTATTTACTTTTGT
TTAATTGATTGCTAAATCTTTAGSGCTTATCTCTTGGTGCATTGTTTTGC
AGTTACTGCTGTTGATTCTGGAAGCAAGGCTTTGGAATTTTTACGTTTGC
ATGAACAAGGTGATCAAAGTGYTGCAGATATTCCCTCTCTTTCTCCAAAT
AATCATCACTAAGATGTTTATGTAAATTTGATCATTACAGATTACTGCAT
GCCAGGAATGACTGGCTATGATCTCCTCAGAAAGATTAAGGTAAAACACA
GGACCGAAATCTTCAGCAAATCATTATGATTTAAATTAAAATCAAAATCC
AAATATTTTAGATRAAAATTTTGCTATGCTCCCCCTTTKGGRGAATCCTC
TCGCYCTGCATGCAAATTCAAAACCCTAATTTAGATCCCACTTTTGGAGA
ATCTWTAATTTTCTATGRTTGAATGATTAAATTTGGTGCATCATATAGTG
TAGAGAAATATTGATCTTCAARGCTTGTAAATTCAATTCCAAATAATTCT
TGATTGTTYCAAATCCTAAGGCAATTAGCAGATCCATCGAAGGTGATAGT
TTTTCCTCAGAAAACTAATAAAAAWTTATTYGATTTGCRGGAATCTAATG
TGTTTAAAGACATACCAGTTGTTATWATGTCCTCARAGAATGAGCCATCA
AGGATCAACAGGTAATTAGGAGAATATTTTAATATTTCTCCGTATACACT
TAATTCATTACACACACACACACACACAGAGACACACATATATCTGTATA
TAATTATATATATGATCATGATCTGACWTGTGGGTTGATGGGTTATTATT
GATCAGATGCTTGGAGGAAGGAGCAGAAGAGTTTTTTTGTTAAACCAATG
CAATTATCAGATRTGAACAAGCTTAGACCTCACATGTTGAAGGGCAGAAG
CAGTATGGATATGGAGGACCAATCCAACKTCAATAAGAGAGAACAAGAAC
AAAATATAATGACTTGATCACTTCATGAGCATTTCATCAGTTTTTTTTCS
TTTKTTWGTGGAAGTATCGCRTAGGAACGATGGTGGATGGATTGTCAAAC
GTTAATATATGTGGGTTTCATGTTACATGTCATGACATAGATGAGTWACT
AACAGYCGAAAGAAAAAAACTTGATCTCTAGAGTTCATTTMTRAGAGATT
CTTCTATTTTCTCTACTAACAGCCAAAATAAACTAATAGAKGAAAGAAAA
TTTAATTTTTTACTTTCAATCTTAACCACTSATTTTCAGTATCATTTAGT
GCTATTGGAGATTTTGCAARCATGGACAACTTTTGTTTGGAAACTTGAAY
ATGTAGCCATGTAGGGAAATCCATGTTAAGTGGGTTGTTGGAGAAAAAAA
TTGTCTATTCTCTYGCCCAAGCCATTTCGTGGCACTAAGACCGAAAACAA
CACTCGGAGCATATCATGTGTTGAGCCTAGTCRGGCTCTAACTGAGTTTT
AACACCAACAATCTATATATGCTTTTATGCCATTAGATTAGATCCCTTGA
GGGGATTTGCTTCCCATTTATTGGAGGTTAAGATGTATTTACTTATTTAA
TCATARTATAAATAGATTTAATGAGACAATTTYCCCTATCAATTGGTGAT
CAATTGGTTCGAGAGTGGCCGYCACCACCTCTATGATCGCCRCAACCACC
TCTACGATCACCGCCACCACTCTTACTMCTGTTGTCACCAMCACCACCCA
CCAGMATCACTWTTGCCACCACCACTAGCACAYTTGCTAACTAATAACTA
TTGYCTCATTTATATATTAGCAMCTCTACGTTCTTATCAAATTCTTATTT
AAATCTCATTGTACTTTTAAATTAAGCAAATAAAAAAAATTTACAAATTC
TAAAAAWTWAAATCCATAAATTTTCCCATCCAAGCGTCCAAACACAAGGT
AATAAAAAAGGTAAAAAGAACMAAAAAAGTAGTGTTCCYCTCTGTCCCAT
TAAGTCGTGGCAATTTCTGAATGGCTGTTGACCACAATAGTCAGTAGTTG
ACTTCACAGCTACAAWATAGAAACMCCAAAMTAWGATTATAAATTAAAAA
AAAAAAAAAAAAARAAGCAGCCAAAGCCACAGTCTACGACTCCAGAGTCC
CACCGGATCAATCAATCACTTTCGACACCTTCACTCACTCAGATTCTCTC
TCTCTCTCTCTCACTATTTTCCCCGCATATTCGGTCCCTTTCCTTGTGGC
GCACTGCCCGAATTAATCTCCCATACAAACACTGTGCCTCGAAGTAAACG
ACGCCGAGAATCTTGGAAATCACCACCGCTGCCAMYACCACTTTTGGCCG
CATTGCCTCGTCGTTTAGGKACAAACTTGGTGCTTTTCCGCCGCCGTTCT
TGTTATTCGTTCCTCTTCTCCGAGCTCGATTCCGAGCYGCCTCGAATTYG
GAAGTGAATGAACTTCAATCCGAATCAGTGATCTCCATCGAGAAGTTCAA
TCGACGGCTCTGATTGAGTCTCCGGCGAGGGAGAGGGCGAGAGTATTGGA
GTTRCGGAAGGAGGCARTGGGAGGYGCAGTGGTGGCGATGGAGGTTAGGG
TTTCGGAAGGGAAAGGGGGATTGAATCGTTGATGCTGCGTATGGACAGGA
TGACTGCGGATCAGGCAAAGGCGGGCCCACTCGAAAGGGACATTGACTTG
GTGAACTTTCATTCGCTTTGGAATTTATTTTATTTTTATTTRTTTTGATT
AAATTTATTTATTTTTATTTGAAGTTGAAATTGCAGTTGATGAATGAATT
AGAAGCGTCATTAGTGATTATTTTTTGTTAATTATTCATTTCATTAGTGT
TTCGTGGTTTTGATAAGTTTTTCCAATAATTTGTTATTAAAATTTGCAAG
CTCTTATAGTTTGTAAGCTTAGCTGTGTTGATGAGGAAAATGCAATGCAA
GAAACTTAAATATGACGATACTTAWAGTCACCGAAGCAACTGTTATTCCG
CAACGTAATCTCATGYCGCATTTGTTGTTGAATTGCCTTATTGAATATGT
AAGAAGTTGTGTGTGCACTYAGGAGATCACTCACTGTTCGTGTCTACATT
GCCGTGTTACATAGACAGTTGTATTGATTATTTCCTATGCTTATGCGCAC
ATGTTTTTGTGTGTGTGTGTGYGCGCACTTGAAAKAAATGAGAAAGGATG
AATGAGAACAACGATAGTTTATTGCCGCAACCAWTTTGCCACAAATAAAG
TTCTTGGTTAATATTTGATGAACTTAAGARGTGTAGCATGGTGCTTTGAC
AAAATTAAACTCGACGAATAGCTGTGTCATATGYCTCGAAACACAGATGC
TGTATTAGAAGTGACTTGATAAGTTTTTGCTCAAGAGAATAAATTTTCTG
ACGTAACATAGATAGATGTGGCAACATATGCCTCTGCAGAAGGAAGKGAA
TGCTTCTCAGATGTGCTAAATATGTTTAATATTCATACATTTAGTTGGAT
GTTCTTGTAATTAACTGTGYRCTGTTTTCTAATCCACASTGATTCATCTT
GYTCTGCAGTGCTATTAATATCGTTCTTTTCCATACAGTTATCAGTTTGG
AGAACATCTGTAGTTTGTTTTAATTCATGTTCTGCTTATTCCCAAACAGG
CCATCACTGCTCTGAAAAAGGGGGCACAATTGCTCAAGTATGGACGCAGA
GGGAAACCCAAATTTTGTCCTTTCAGGCTGTCCAATGTATGTCCAATTGT
ATTTGAAGAGCAACATACATTCTTTTATCTAWTTTGCTTGTTTCTTTTTT
MTAAATTGCTTATTGTTCTTTCTTGGTGGGAAAAGGCTTTGTTGTTGTTG
TTRTTGYKWATYGKTCTTTYTTGGAGTTTTCAAATGTGAATCRGAGTTTT
TAYGAAYGACTGGTCTTGCATTCATGCTTGTTTATATTGATTATCTATTT
CTTGCTTCACTAAGCTTATGTTACGCCTTTAAGGTATGTCAAAAGGGATT
TGCAGTGAAGTATTTGATGGCTTTATAATGTTTTAGACTTGTATATAGAC
TATAGAGCAATAGTCTCTAGTTATATCATATGTTTGGCATGKTATGCCTC
TAGATGGTGAATTAGGTCYGGATTGATRGTCTAGCGARAAAAAATTACTT
GGTAGAGTAAAGTAGGCAGGGCACAGTAAGTGAAGCGAAATGTCTACAAT
ATCTGTATGCCTTAGGCATTATCTTTCATATTCCAGAACAATTTGKTAAG
AGTAAACTAGGCWGGGCTTATAGGGTGAAAYAACTMAAAAAAAATTTCAT
TTTAAAGAAAAATGGTTACAGTTAACTGGAATGTGGTGAGAAGGATACCC
CTATGAGAAGTAGCCAAGAAATGGCTATCAGATTTGCTTTTACCTCTCCT
TAAAGTAATTTTGCYGGGTTCAGAGAGAGACTGGTCTCCAGTGCATCTAT
GGCTTACTTTTTAATATGATCCCAAGGCTACATATAGACAAACACCATGA
WAACCATCGTATATGCTATTGATATGATTAATAAAGTAAAAAACCTGAAC
AACTGGTTCACTCAGAGGGTTTAGACAGTGTGGAACATATTCTTCATACT
GCTCGGTATTCACATTCTACTAAATCTGCTATGTGGTGCTTGTTTCAGTT
GAATATAGGATTAGCATCATTAGTAATRWGGTTTGGGTGCTTGCTCATGT
CTAGTTCTAACCTTCTTGATGTTGCAGTAAATTCTTCATCTGAAGTTCTA
CTGTTACTCAGYCTTWAAAAACTATTATTCCTTTATGATAATTTTGTTAA
GCTTTATGARATCTAATAACATGATTTTTATGAGTCATTTATYGCAGTTT
YRAGTGATGTACTGGGCAAAGAATATTGCCGTCTATTCCATTTTTYMSTT
GGATTTTSAATGTTATTCCATGTTTCTTCTTTCAGGATGAATCTKTTCTA
ATATGGTACTCAGGGAAMGAGGAGAAATATGTTAAACTAACCCAAGTCTC
RAGAATTGTACCTGGTCAGCGCACTGTAAGTTTCTCWTGTTGTGGTCTCC
TACACCTCTTCAATGGTGAATACTTCAATAGTATGCCRGWTATAGATGAC
AAGAACATACAAATAGTATAAATCACTTATTTGTTTTCCYGTAGATTTAT
CTTTAGTTCTTTCTAGAACTATATTTCCTCCAGATTATATTTKSTTTCCT
GTTGATAAGGATTTTAATGTTGTATTGCTTGTTTAATTCTCTTTGTAATT
TATTTCTCAGTTATGAATGTAACTGAACATTYTGTTTTGATATTATTGCA
GCAAACCTTTCAGAGGTATCCTCGGCCTGAAAAGGAATATCAGTCATTTT
CTCTTATATATAATGATAGGTCTTTGGATTTGGTAAGCATCTTCTTCGTT
GTTGATTTCTGCTGCATCTGATTCTTAGATATTTTGTTCTTTCTTTTCTT
TTATCCAATCCATTTACTTATTTTCTTTTAACTTTCCTATSTATTAGTTA
TGTATCGTACCCCGTGTGCTCTTCCATAAATTTCATTTACTTTTTTTAAW
GTCACTTGTTTATGCCAGATATGCAAGGATAAAGATGAAGCTGAAGTTTG
GTTTACTGGTCTAAAAGCATTAATATCACGTGGCCTTCACCAGAAGCGGA
GAGCAGAATCAAGAAGTGGAGTTACATCTGAGGCAAATAGTCCTAGATCA
CACACCCAACAAAGTTCTCCATTGAGCTCTCCATTTTGTAGTGGTGATAG
TTCGCAGAAGGTGATCTATTTTTGTTTCTCTTGTTATTGCCATCCCTAAA
CTRTGATATAGAAGTAAATWGTCTTCTTGTCACTGCTGCAGGATGGCGYG
GAACCGTTTCATCTTCATGCTGCATTTGAAAGCCCTCCTAAAATTGGTTT
AGAGAAGGCTTTATCGGATGTCATGTTGTATGCCCTGCCTCCAAAAATTC
CCTTCCCTTCAGATGCTTCTTGTGGCTCAGTCCCSTCTTCGGGAGGCTCA
GATGGAATGAACGGACGAACAAAGGGTGCMGGTGTGGATGCATTTAGAGT
AAGTTTATCAAGTGCTGTTAGCTCATCAAGTCAAGGCTCTGGTCATGATG
AAGGTGATGCTTTAGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGCGTT
GGTGATTGCTTTCTSGGTGGAGGATCACATAGAGTTGGAAGTTCTTCTGG
TTGTAAGATGGATTCTTTTGTGCCTAAAGTCTTGGAATCTGCCGTAGTGC
TTGATGTCCAAAGCATAGCWTGTGGTGGACGGCATGCTGCTTTTGTAACC
AAGCAAGGGGAGGTATTTTCTTGGGGTGAAGAATTAGGAGGCAGACTTGG
ACAWGGTGTGGATGCTGATGTTTCACATCCAAAACTCATAGATGCTCTGA
AAAACATGAATATTGAATTATTAGCATGTGGAGAATACCATTCTTGTGCT
GTCACACTTTCCGGTGACATGTACACATGGGGTGSCAGTAATTCCAATTT
TGCACTCCTTGGTCATGGGTCTCAATCAAGTCAATGGGTCCCAAAAAAGC
TAAATGGACCTTTAGAGGGAATTCATGTCTCATCGGTTTCATGTGGACCA
TGGCACACAGCTGTTGTGACCTCTGCTGGGCAACTGTTTACTTTTGGCGA
TGGCACATTTGGTGTTCTAGGTCATGGGGATCGAAAGAGCACTTCGGTGC
CCAGGGAGGTTGATTCCCTTAAAGGTCTCCGCACTGTGCGAGTAGCTTGT
GGTGTTTGGCACACTGCAGCAGTAATTGAAGTTATGGTGGGGTCATCAAG
TTCCAGCAATTGCTCTTCTGGAAAGCTTTTTACATGGGGAGATGGAGATA
AAGGTCGACTTGGACACGGTGATAAGGAAGCAAGACTTGTGCCCACTTGT
GTTGCTGCTTTGGTTGAACCCAACTTYTGTAAAGTTGCCTGCGGACAAAG
CATGACTGTTGCACTTACAACTACGGGCCATGTTTACACTATGGGAAGCC
CTGTTTTTGGTCAATTAGGGGTCCCTAAAGCWGATGGGAAACTTCCAAGA
CGTGTCGAGGGAAAGCTAATGAAGAGTTTTGTYGAAGAAATTGCTTGTGG
TGMTAATCATGTTGCRGTTTTAACTTCAAGAACTGAAGTTTACACTTGGG
GAAAGGGTGCAAATGGTCGATTAGGTCTTGGGGATACAGAAGACAAATTT
TCACCAACAYTAGTTGAAGCTTTAAAAGACAAACAAGTCAARAGTATTGT
CTGTGGYGCTAACTTTACTGCTGCTATCTGTCTTCACAAATGGGTCTCTR
GYATTGATCAATCAATGTGTTCTGGCTGTCGCCTTCCMTTTAATTTTAAA
AGAAAAAGACACAATTGTTATAATTGTGGACTTGTGYTATGCCATTCATG
CAGCAGCAACAAGTGTCTCAAGGCKTCCATGGCACCAAACCCAAACAAAC
CTTATCGTGTCTGTGATAACTGTTTTGCAAAACTTAGGAAGGCCACTGAA
ACCAAYTCTTCATCTGGGTCTGCTATCAGTAGAAGGGGAAGTATGAATCA
GGGATTCAACGAACTGATTGAAAACAATGTTAAAGAAATGGAAAATGGAT
CTTCCAAAARCAACAAGAAAATGGATTTCAGCAGCAATTGTGTTACTCCM
ATTGCAAATGGAGTTTCTGAGCGTCGCRCRCTCAATGGGACTAAATCTTT
CAACCCTGGATCATCCAAAAAGTTYTTCTCTGCTTCRCTTCCTGGATCCA
GAATTGCATCTCGRGCAACATCACCAACATCGAGACGATCTAGTCCACCT
CGTTCCACAACACCAACCCCAGCTCTTTCAGGGCTTACTTTTCCAAAAAT
TGGGGATGATGCTAAAAGGAAAAATGTCAATCTAAGTGAAGAAGTTCTAA
AATTAAAAGCTCAGGTATGTTGCTTGTCTTTTTTTGAATGTCAATAACTG
TATGAAAATTCACTTTTCTGTTCAATATCTAGTTTTCCCTGCATTTCGGT
CAAAGCAAATTTACTTTCTCCCGAGGATAACTTGCCTTTCTGTTTGAGTA
ACAATTTGATTCTGTATGCAACTCTGCAATATCTCGATGTCTAAGAGGGA
CAAAGACTGCTAGATGTCGATGGCATTTTCTCTACTTTGTGTGTCAGTAC
TATGTATACAATAATTTTAGGGCAATGAGCAGTACTGAAATATTTCTCTT
ATATTTTCTTCATCTCCTTCATTCTAGTTTACCATGGTGATTACCTTTTT
ATTCTGTTTTTTTTTTATGGTGTAGGTTGAAGATCTTACTCATAAAGCTC
AACTTCAAGACATTGAGATGGAAAAAACTACCCAACAGTTGAAGGAGGCT
CTGAAAGTAGCAGGGGAAGAAACTCTGAAATGCAAAGCAGCGAAGGAAGT
AATTAAGTCACTCACAGCCCAAGTAGGTTTCATTCTTATGTTTATAGTGA
GTATGCATTCTGCATTTAAACAGTTAGTGTTTGAAATAAAGATTGTGGTC
AGTTTGATTTTTCAAGCACATGCAGTAATTTATCTGGATATTAACATTCT
GTGGGAAATGCAAAAGAAAAGAATATAATGATGAAATCAATTCGTTTTTT
GTATCAGTGAGGATGTATGGAATTTCGTAACAAACAGCAACCTTACTTAG
GTGCTATGTGCATATGATCAAGTTTACAGTTCGTAATCAATAATATGGAA
ATAATGATAAACAGCTAATAGATATATAACTAACAATTTACACTTTTTAA
GTTTATTTAGGTCCTCTGTAGATTATCCTATTTAGGACTGCTGTACTAAA
ATTCAAGTTTTGAGGGTGACATGTCTAATATGGAAATTTTAGTGCGGGAT
CGGTCATGCAAGTTAGATTTATTATGTCGGTTTCATGTCTACTACTGAAA
AAATGCATACTTGATCCCTTTCAGAAGTGCATTACAGTCCTAATCTCATA
TTATGCATTGATTGTTTCAAACTTGTTTAATCCAAGGATAGACTTTTGAC
ATTTTAAGTTCTTTGTCGTGACATTTCGGAACCCCTTTATGCAAGTAAGC
ATTACAGTAGCTGAAATAATACTGTTCGATAGAAAGGTCTGAATTAGTAC
CTTGTTTCATTTATGTTAGTTAAAGGAAATGGCTGAAAGGTTACCAATTG
GAACGGCAAGAAACATGGATACCCGTCCGTTAGACTCTTCCAGTCCCACT
CATGAAGTTTCTACTACAGCCGTCGAGAAAACAAGCAGTCTATTGAATTT
CCATGAACCTTATTCAGTTGTATCGGACAGTGTGATGATTTCTGGTGTGC
CACGGGCCACTTCGAATCACACAGAAGTGTCACATTCAGAAGCAACAGCT
AGGCATAAAAACAGAGGAACAAAGACTGAAATAGCACAAGGGGACGAGTG
GGTTGAGCAAGATGAGCCTGGTGTATATATTACCCTTGTTTCCTTGCCTG
GAGGTGTCAAAGATCTCAAGCGTGTTCGTTTCAGGTATGCCCCTTTTTCC
AGATTACTTCATGCACCCAAATTCAAAAAAAAGGTCCTCAGGTATCGAAA
ATGAATGTGTTTGTGTTTTCAAAGGTGGATTGAATGGTGTCATCACGTGC
ATCTTAGTTGCATATCACAAATTAGGAGGAGCTGTCTAATCTAGTCCAGG
AAACTAATGAAAGGGTTCCCATATTGCACATATTATGTCCAAATTTTAGT
ACGGATTCGTGCTGATATCTAAAGTCTGAATGTCRATAYGTATTTCACAT
GTCAATGTTAATCTTTTATTCATTTTTCTACTTTTCCTAATRGTAACGTT
ACTTTCAAGGGATCCTAAATGTTATGTYCTTCRCTTACGAGGCCTGCATG
TTCCAAACTATAATTTAAYGTACACTGTCAATCATATTTAATTGACGATG
ACTAACTTTCAAGTGCCTCAATTCTTTCAGTCGAAAGCGGTTCAGCGAGA
AACAAGCAGAACAGTGGTGGGCGGCAAATAGGGGTAGAGTATATCAGCAG
TACAATGTTCCGGTGGTTGAAAAATCCAGTATTCCGATGGGGAGAGAAGG
GTTAGCTCATTGA

protein sequence of MDP0000290099

>MDP0000290099 ID=MDP0000290099; Name=MDP0000290099; organism=Malus x domestica; type=polypeptide; length=1193bp
MISKFGCXPLLLCMLVMLIDTAYLLVHCFAVTAVDSGSKALEFLRLHEQD
YCMPGMTGYDLLRKIKKTNKXLFDLXESNVFKDIPVVXMSSXNEPSRINS
DLHREVQSTALIESPARERARVLELRKEAXGGAVVAMEAITALKKGAQLL
KYGRRGKPKFCPFRLSNDESXLIWYSGXEEKYVKLTQVSRIVPGQRTQTF
QRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFTGLKALISRGLHQK
RRAESRSGVTSEANSPRSHTQQSSPLSSPFCSGDSSQKDGXEPFHLHAAF
ESPPKIGLEKALSDVMLYALPPKIPFPSDASCGSVPSSGGSDGMNGRTKG
AGVDAFRVSLSSAVSSSSQGSGHDEGDALALGDVFIWGEGVGDCFLGGGS
HRVGSSSGCKMDSFVPKVLESAVVLDVQSIACGGRHAAFVTKQGEVFSWG
EELGGRLGXGVDADVSHPKLIDALKNMNIELLACGEYHSCAVTLSGDMYT
WGXSNSNFALLGHGSQSSQWVPKKLNGPLEGIHVSSVSCGPWHTAVVTSA
GQLFTFGDGTFGVLGHGDRKSTSVPREVDSLKGLRTVRVACGVWHTAAVI
EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNF
CKVACGQSMTVALTTTGHVYTMGSPVFGQLGVPKADGKLPRRVEGKLMKS
FVEEIACGXNHVAVLTSRTEVYTWGKGANGRLGLGDTEDKFSPTXVEALK
DKQVKSIVCGANFTAAICLHKWVSXIDQSMCSGCRLPFNFKRKRHNCYNC
GLVXCHSCSSNKCLKASMAPNPNKPYRVCDNCFAKLRKATETNSSSGSAI
SRRGSMNQGFNELIENNVKEMENGSSKXNKKMDFSSNCVTPIANGVSERR
XLNGTKSFNPGSSKKFFSASLPGSRIASRATSPTSRRSSPPRSTTPTPAL
SGLTFPKIGDDAKRKNVNLSEEVLKLKAQVEDLTHKAQLQDIEMEKTTQQ
LKEALKVAGEETLKCKAAKEVIKSLTAQLKEMAERLPIGTARNMDTRPLD
SSSPTHEVSTTAVEKTSSLLNFHEPYSVVSDSVMISGVPRATSNHTEVSH
SEATARHKNRGTKTEIAQGDEWVEQDEPGVYITLVSLPGGVKDLKRVRFS
RKRFSEKQAEQWWAANRGRVYQQYNVPVVEKSSIPMGREGLAH

mRNA from alignment at chr2:32803266..32813578+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000290099 ID=MDP0000290099; Name=MDP0000290099; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr2:32803266..32813578+ (Malus x domestica

mRNA from alignment at MDC010657.494:3898..14210+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000290099 ID=MDP0000290099; Name=MDP0000290099; organism=Malus x domestica; type=mRNA; length=10313bp; location=Sequence derived from: MDC010657.494:3898..14210+ (Malus x domestica
ATGATTTCAAAGTTTGGATGCGYTCCTTTGCTGCTTTGTATGCTCGTCAT
GCTTATCGATACGTCARTATGATATGTTATTAGATTGGCCAAACTGGCTT
TGTTTTTCGCTTTCGAGTCTTTTTAGTTTGAGAACCTTTTGGATTTTAAC
CAGGGCACCTTTTTTAAGTTTGTACCTTATTTTTAAGAAAGTTTTGTACT
TTTCTTTAAATTCTTATTAAACCACTATCGTTTTACCTAAAAACAAATAA
GATTTTGATTTATTTTATGGAAAATATTGATTATGTTTATTTACTTTTGT
TTAATTGATTGCTAAATCTTTAGSGCTTATCTCTTGGTGCATTGTTTTGC
AGTTACTGCTGTTGATTCTGGAAGCAAGGCTTTGGAATTTTTACGTTTGC
ATGAACAAGGTGATCAAAGTGYTGCAGATATTCCCTCTCTTTCTCCAAAT
AATCATCACTAAGATGTTTATGTAAATTTGATCATTACAGATTACTGCAT
GCCAGGAATGACTGGCTATGATCTCCTCAGAAAGATTAAGGTAAAACACA
GGACCGAAATCTTCAGCAAATCATTATGATTTAAATTAAAATCAAAATCC
AAATATTTTAGATRAAAATTTTGCTATGCTCCCCCTTTKGGRGAATCCTC
TCGCYCTGCATGCAAATTCAAAACCCTAATTTAGATCCCACTTTTGGAGA
ATCTWTAATTTTCTATGRTTGAATGATTAAATTTGGTGCATCATATAGTG
TAGAGAAATATTGATCTTCAARGCTTGTAAATTCAATTCCAAATAATTCT
TGATTGTTYCAAATCCTAAGGCAATTAGCAGATCCATCGAAGGTGATAGT
TTTTCCTCAGAAAACTAATAAAAAWTTATTYGATTTGCRGGAATCTAATG
TGTTTAAAGACATACCAGTTGTTATWATGTCCTCARAGAATGAGCCATCA
AGGATCAACAGGTAATTAGGAGAATATTTTAATATTTCTCCGTATACACT
TAATTCATTACACACACACACACACACAGAGACACACATATATCTGTATA
TAATTATATATATGATCATGATCTGACWTGTGGGTTGATGGGTTATTATT
GATCAGATGCTTGGAGGAAGGAGCAGAAGAGTTTTTTTGTTAAACCAATG
CAATTATCAGATRTGAACAAGCTTAGACCTCACATGTTGAAGGGCAGAAG
CAGTATGGATATGGAGGACCAATCCAACKTCAATAAGAGAGAACAAGAAC
AAAATATAATGACTTGATCACTTCATGAGCATTTCATCAGTTTTTTTTCS
TTTKTTWGTGGAAGTATCGCRTAGGAACGATGGTGGATGGATTGTCAAAC
GTTAATATATGTGGGTTTCATGTTACATGTCATGACATAGATGAGTWACT
AACAGYCGAAAGAAAAAAACTTGATCTCTAGAGTTCATTTMTRAGAGATT
CTTCTATTTTCTCTACTAACAGCCAAAATAAACTAATAGAKGAAAGAAAA
TTTAATTTTTTACTTTCAATCTTAACCACTSATTTTCAGTATCATTTAGT
GCTATTGGAGATTTTGCAARCATGGACAACTTTTGTTTGGAAACTTGAAY
ATGTAGCCATGTAGGGAAATCCATGTTAAGTGGGTTGTTGGAGAAAAAAA
TTGTCTATTCTCTYGCCCAAGCCATTTCGTGGCACTAAGACCGAAAACAA
CACTCGGAGCATATCATGTGTTGAGCCTAGTCRGGCTCTAACTGAGTTTT
AACACCAACAATCTATATATGCTTTTATGCCATTAGATTAGATCCCTTGA
GGGGATTTGCTTCCCATTTATTGGAGGTTAAGATGTATTTACTTATTTAA
TCATARTATAAATAGATTTAATGAGACAATTTYCCCTATCAATTGGTGAT
CAATTGGTTCGAGAGTGGCCGYCACCACCTCTATGATCGCCRCAACCACC
TCTACGATCACCGCCACCACTCTTACTMCTGTTGTCACCAMCACCACCCA
CCAGMATCACTWTTGCCACCACCACTAGCACAYTTGCTAACTAATAACTA
TTGYCTCATTTATATATTAGCAMCTCTACGTTCTTATCAAATTCTTATTT
AAATCTCATTGTACTTTTAAATTAAGCAAATAAAAAAAATTTACAAATTC
TAAAAAWTWAAATCCATAAATTTTCCCATCCAAGCGTCCAAACACAAGGT
AATAAAAAAGGTAAAAAGAACMAAAAAAGTAGTGTTCCYCTCTGTCCCAT
TAAGTCGTGGCAATTTCTGAATGGCTGTTGACCACAATAGTCAGTAGTTG
ACTTCACAGCTACAAWATAGAAACMCCAAAMTAWGATTATAAATTAAAAA
AAAAAAAAAAAAARAAGCAGCCAAAGCCACAGTCTACGACTCCAGAGTCC
CACCGGATCAATCAATCACTTTCGACACCTTCACTCACTCAGATTCTCTC
TCTCTCTCTCTCACTATTTTCCCCGCATATTCGGTCCCTTTCCTTGTGGC
GCACTGCCCGAATTAATCTCCCATACAAACACTGTGCCTCGAAGTAAACG
ACGCCGAGAATCTTGGAAATCACCACCGCTGCCAMYACCACTTTTGGCCG
CATTGCCTCGTCGTTTAGGKACAAACTTGGTGCTTTTCCGCCGCCGTTCT
TGTTATTCGTTCCTCTTCTCCGAGCTCGATTCCGAGCYGCCTCGAATTYG
GAAGTGAATGAACTTCAATCCGAATCAGTGATCTCCATCGAGAAGTTCAA
TCGACGGCTCTGATTGAGTCTCCGGCGAGGGAGAGGGCGAGAGTATTGGA
GTTRCGGAAGGAGGCARTGGGAGGYGCAGTGGTGGCGATGGAGGTTAGGG
TTTCGGAAGGGAAAGGGGGATTGAATCGTTGATGCTGCGTATGGACAGGA
TGACTGCGGATCAGGCAAAGGCGGGCCCACTCGAAAGGGACATTGACTTG
GTGAACTTTCATTCGCTTTGGAATTTATTTTATTTTTATTTRTTTTGATT
AAATTTATTTATTTTTATTTGAAGTTGAAATTGCAGTTGATGAATGAATT
AGAAGCGTCATTAGTGATTATTTTTTGTTAATTATTCATTTCATTAGTGT
TTCGTGGTTTTGATAAGTTTTTCCAATAATTTGTTATTAAAATTTGCAAG
CTCTTATAGTTTGTAAGCTTAGCTGTGTTGATGAGGAAAATGCAATGCAA
GAAACTTAAATATGACGATACTTAWAGTCACCGAAGCAACTGTTATTCCG
CAACGTAATCTCATGYCGCATTTGTTGTTGAATTGCCTTATTGAATATGT
AAGAAGTTGTGTGTGCACTYAGGAGATCACTCACTGTTCGTGTCTACATT
GCCGTGTTACATAGACAGTTGTATTGATTATTTCCTATGCTTATGCGCAC
ATGTTTTTGTGTGTGTGTGTGYGCGCACTTGAAAKAAATGAGAAAGGATG
AATGAGAACAACGATAGTTTATTGCCGCAACCAWTTTGCCACAAATAAAG
TTCTTGGTTAATATTTGATGAACTTAAGARGTGTAGCATGGTGCTTTGAC
AAAATTAAACTCGACGAATAGCTGTGTCATATGYCTCGAAACACAGATGC
TGTATTAGAAGTGACTTGATAAGTTTTTGCTCAAGAGAATAAATTTTCTG
ACGTAACATAGATAGATGTGGCAACATATGCCTCTGCAGAAGGAAGKGAA
TGCTTCTCAGATGTGCTAAATATGTTTAATATTCATACATTTAGTTGGAT
GTTCTTGTAATTAACTGTGYRCTGTTTTCTAATCCACASTGATTCATCTT
GYTCTGCAGTGCTATTAATATCGTTCTTTTCCATACAGTTATCAGTTTGG
AGAACATCTGTAGTTTGTTTTAATTCATGTTCTGCTTATTCCCAAACAGG
CCATCACTGCTCTGAAAAAGGGGGCACAATTGCTCAAGTATGGACGCAGA
GGGAAACCCAAATTTTGTCCTTTCAGGCTGTCCAATGTATGTCCAATTGT
ATTTGAAGAGCAACATACATTCTTTTATCTAWTTTGCTTGTTTCTTTTTT
MTAAATTGCTTATTGTTCTTTCTTGGTGGGAAAAGGCTTTGTTGTTGTTG
TTRTTGYKWATYGKTCTTTYTTGGAGTTTTCAAATGTGAATCRGAGTTTT
TAYGAAYGACTGGTCTTGCATTCATGCTTGTTTATATTGATTATCTATTT
CTTGCTTCACTAAGCTTATGTTACGCCTTTAAGGTATGTCAAAAGGGATT
TGCAGTGAAGTATTTGATGGCTTTATAATGTTTTAGACTTGTATATAGAC
TATAGAGCAATAGTCTCTAGTTATATCATATGTTTGGCATGKTATGCCTC
TAGATGGTGAATTAGGTCYGGATTGATRGTCTAGCGARAAAAAATTACTT
GGTAGAGTAAAGTAGGCAGGGCACAGTAAGTGAAGCGAAATGTCTACAAT
ATCTGTATGCCTTAGGCATTATCTTTCATATTCCAGAACAATTTGKTAAG
AGTAAACTAGGCWGGGCTTATAGGGTGAAAYAACTMAAAAAAAATTTCAT
TTTAAAGAAAAATGGTTACAGTTAACTGGAATGTGGTGAGAAGGATACCC
CTATGAGAAGTAGCCAAGAAATGGCTATCAGATTTGCTTTTACCTCTCCT
TAAAGTAATTTTGCYGGGTTCAGAGAGAGACTGGTCTCCAGTGCATCTAT
GGCTTACTTTTTAATATGATCCCAAGGCTACATATAGACAAACACCATGA
WAACCATCGTATATGCTATTGATATGATTAATAAAGTAAAAAACCTGAAC
AACTGGTTCACTCAGAGGGTTTAGACAGTGTGGAACATATTCTTCATACT
GCTCGGTATTCACATTCTACTAAATCTGCTATGTGGTGCTTGTTTCAGTT
GAATATAGGATTAGCATCATTAGTAATRWGGTTTGGGTGCTTGCTCATGT
CTAGTTCTAACCTTCTTGATGTTGCAGTAAATTCTTCATCTGAAGTTCTA
CTGTTACTCAGYCTTWAAAAACTATTATTCCTTTATGATAATTTTGTTAA
GCTTTATGARATCTAATAACATGATTTTTATGAGTCATTTATYGCAGTTT
YRAGTGATGTACTGGGCAAAGAATATTGCCGTCTATTCCATTTTTYMSTT
GGATTTTSAATGTTATTCCATGTTTCTTCTTTCAGGATGAATCTKTTCTA
ATATGGTACTCAGGGAAMGAGGAGAAATATGTTAAACTAACCCAAGTCTC
RAGAATTGTACCTGGTCAGCGCACTGTAAGTTTCTCWTGTTGTGGTCTCC
TACACCTCTTCAATGGTGAATACTTCAATAGTATGCCRGWTATAGATGAC
AAGAACATACAAATAGTATAAATCACTTATTTGTTTTCCYGTAGATTTAT
CTTTAGTTCTTTCTAGAACTATATTTCCTCCAGATTATATTTKSTTTCCT
GTTGATAAGGATTTTAATGTTGTATTGCTTGTTTAATTCTCTTTGTAATT
TATTTCTCAGTTATGAATGTAACTGAACATTYTGTTTTGATATTATTGCA
GCAAACCTTTCAGAGGTATCCTCGGCCTGAAAAGGAATATCAGTCATTTT
CTCTTATATATAATGATAGGTCTTTGGATTTGGTAAGCATCTTCTTCGTT
GTTGATTTCTGCTGCATCTGATTCTTAGATATTTTGTTCTTTCTTTTCTT
TTATCCAATCCATTTACTTATTTTCTTTTAACTTTCCTATSTATTAGTTA
TGTATCGTACCCCGTGTGCTCTTCCATAAATTTCATTTACTTTTTTTAAW
GTCACTTGTTTATGCCAGATATGCAAGGATAAAGATGAAGCTGAAGTTTG
GTTTACTGGTCTAAAAGCATTAATATCACGTGGCCTTCACCAGAAGCGGA
GAGCAGAATCAAGAAGTGGAGTTACATCTGAGGCAAATAGTCCTAGATCA
CACACCCAACAAAGTTCTCCATTGAGCTCTCCATTTTGTAGTGGTGATAG
TTCGCAGAAGGTGATCTATTTTTGTTTCTCTTGTTATTGCCATCCCTAAA
CTRTGATATAGAAGTAAATWGTCTTCTTGTCACTGCTGCAGGATGGCGYG
GAACCGTTTCATCTTCATGCTGCATTTGAAAGCCCTCCTAAAATTGGTTT
AGAGAAGGCTTTATCGGATGTCATGTTGTATGCCCTGCCTCCAAAAATTC
CCTTCCCTTCAGATGCTTCTTGTGGCTCAGTCCCSTCTTCGGGAGGCTCA
GATGGAATGAACGGACGAACAAAGGGTGCMGGTGTGGATGCATTTAGAGT
AAGTTTATCAAGTGCTGTTAGCTCATCAAGTCAAGGCTCTGGTCATGATG
AAGGTGATGCTTTAGCTTTAGGGGATGTTTTCATTTGGGGGGAAGGCGTT
GGTGATTGCTTTCTSGGTGGAGGATCACATAGAGTTGGAAGTTCTTCTGG
TTGTAAGATGGATTCTTTTGTGCCTAAAGTCTTGGAATCTGCCGTAGTGC
TTGATGTCCAAAGCATAGCWTGTGGTGGACGGCATGCTGCTTTTGTAACC
AAGCAAGGGGAGGTATTTTCTTGGGGTGAAGAATTAGGAGGCAGACTTGG
ACAWGGTGTGGATGCTGATGTTTCACATCCAAAACTCATAGATGCTCTGA
AAAACATGAATATTGAATTATTAGCATGTGGAGAATACCATTCTTGTGCT
GTCACACTTTCCGGTGACATGTACACATGGGGTGSCAGTAATTCCAATTT
TGCACTCCTTGGTCATGGGTCTCAATCAAGTCAATGGGTCCCAAAAAAGC
TAAATGGACCTTTAGAGGGAATTCATGTCTCATCGGTTTCATGTGGACCA
TGGCACACAGCTGTTGTGACCTCTGCTGGGCAACTGTTTACTTTTGGCGA
TGGCACATTTGGTGTTCTAGGTCATGGGGATCGAAAGAGCACTTCGGTGC
CCAGGGAGGTTGATTCCCTTAAAGGTCTCCGCACTGTGCGAGTAGCTTGT
GGTGTTTGGCACACTGCAGCAGTAATTGAAGTTATGGTGGGGTCATCAAG
TTCCAGCAATTGCTCTTCTGGAAAGCTTTTTACATGGGGAGATGGAGATA
AAGGTCGACTTGGACACGGTGATAAGGAAGCAAGACTTGTGCCCACTTGT
GTTGCTGCTTTGGTTGAACCCAACTTYTGTAAAGTTGCCTGCGGACAAAG
CATGACTGTTGCACTTACAACTACGGGCCATGTTTACACTATGGGAAGCC
CTGTTTTTGGTCAATTAGGGGTCCCTAAAGCWGATGGGAAACTTCCAAGA
CGTGTCGAGGGAAAGCTAATGAAGAGTTTTGTYGAAGAAATTGCTTGTGG
TGMTAATCATGTTGCRGTTTTAACTTCAAGAACTGAAGTTTACACTTGGG
GAAAGGGTGCAAATGGTCGATTAGGTCTTGGGGATACAGAAGACAAATTT
TCACCAACAYTAGTTGAAGCTTTAAAAGACAAACAAGTCAARAGTATTGT
CTGTGGYGCTAACTTTACTGCTGCTATCTGTCTTCACAAATGGGTCTCTR
GYATTGATCAATCAATGTGTTCTGGCTGTCGCCTTCCMTTTAATTTTAAA
AGAAAAAGACACAATTGTTATAATTGTGGACTTGTGYTATGCCATTCATG
CAGCAGCAACAAGTGTCTCAAGGCKTCCATGGCACCAAACCCAAACAAAC
CTTATCGTGTCTGTGATAACTGTTTTGCAAAACTTAGGAAGGCCACTGAA
ACCAAYTCTTCATCTGGGTCTGCTATCAGTAGAAGGGGAAGTATGAATCA
GGGATTCAACGAACTGATTGAAAACAATGTTAAAGAAATGGAAAATGGAT
CTTCCAAAARCAACAAGAAAATGGATTTCAGCAGCAATTGTGTTACTCCM
ATTGCAAATGGAGTTTCTGAGCGTCGCRCRCTCAATGGGACTAAATCTTT
CAACCCTGGATCATCCAAAAAGTTYTTCTCTGCTTCRCTTCCTGGATCCA
GAATTGCATCTCGRGCAACATCACCAACATCGAGACGATCTAGTCCACCT
CGTTCCACAACACCAACCCCAGCTCTTTCAGGGCTTACTTTTCCAAAAAT
TGGGGATGATGCTAAAAGGAAAAATGTCAATCTAAGTGAAGAAGTTCTAA
AATTAAAAGCTCAGGTATGTTGCTTGTCTTTTTTTGAATGTCAATAACTG
TATGAAAATTCACTTTTCTGTTCAATATCTAGTTTTCCCTGCATTTCGGT
CAAAGCAAATTTACTTTCTCCCGAGGATAACTTGCCTTTCTGTTTGAGTA
ACAATTTGATTCTGTATGCAACTCTGCAATATCTCGATGTCTAAGAGGGA
CAAAGACTGCTAGATGTCGATGGCATTTTCTCTACTTTGTGTGTCAGTAC
TATGTATACAATAATTTTAGGGCAATGAGCAGTACTGAAATATTTCTCTT
ATATTTTCTTCATCTCCTTCATTCTAGTTTACCATGGTGATTACCTTTTT
ATTCTGTTTTTTTTTTATGGTGTAGGTTGAAGATCTTACTCATAAAGCTC
AACTTCAAGACATTGAGATGGAAAAAACTACCCAACAGTTGAAGGAGGCT
CTGAAAGTAGCAGGGGAAGAAACTCTGAAATGCAAAGCAGCGAAGGAAGT
AATTAAGTCACTCACAGCCCAAGTAGGTTTCATTCTTATGTTTATAGTGA
GTATGCATTCTGCATTTAAACAGTTAGTGTTTGAAATAAAGATTGTGGTC
AGTTTGATTTTTCAAGCACATGCAGTAATTTATCTGGATATTAACATTCT
GTGGGAAATGCAAAAGAAAAGAATATAATGATGAAATCAATTCGTTTTTT
GTATCAGTGAGGATGTATGGAATTTCGTAACAAACAGCAACCTTACTTAG
GTGCTATGTGCATATGATCAAGTTTACAGTTCGTAATCAATAATATGGAA
ATAATGATAAACAGCTAATAGATATATAACTAACAATTTACACTTTTTAA
GTTTATTTAGGTCCTCTGTAGATTATCCTATTTAGGACTGCTGTACTAAA
ATTCAAGTTTTGAGGGTGACATGTCTAATATGGAAATTTTAGTGCGGGAT
CGGTCATGCAAGTTAGATTTATTATGTCGGTTTCATGTCTACTACTGAAA
AAATGCATACTTGATCCCTTTCAGAAGTGCATTACAGTCCTAATCTCATA
TTATGCATTGATTGTTTCAAACTTGTTTAATCCAAGGATAGACTTTTGAC
ATTTTAAGTTCTTTGTCGTGACATTTCGGAACCCCTTTATGCAAGTAAGC
ATTACAGTAGCTGAAATAATACTGTTCGATAGAAAGGTCTGAATTAGTAC
CTTGTTTCATTTATGTTAGTTAAAGGAAATGGCTGAAAGGTTACCAATTG
GAACGGCAAGAAACATGGATACCCGTCCGTTAGACTCTTCCAGTCCCACT
CATGAAGTTTCTACTACAGCCGTCGAGAAAACAAGCAGTCTATTGAATTT
CCATGAACCTTATTCAGTTGTATCGGACAGTGTGATGATTTCTGGTGTGC
CACGGGCCACTTCGAATCACACAGAAGTGTCACATTCAGAAGCAACAGCT
AGGCATAAAAACAGAGGAACAAAGACTGAAATAGCACAAGGGGACGAGTG
GGTTGAGCAAGATGAGCCTGGTGTATATATTACCCTTGTTTCCTTGCCTG
GAGGTGTCAAAGATCTCAAGCGTGTTCGTTTCAGGTATGCCCCTTTTTCC
AGATTACTTCATGCACCCAAATTCAAAAAAAAGGTCCTCAGGTATCGAAA
ATGAATGTGTTTGTGTTTTCAAAGGTGGATTGAATGGTGTCATCACGTGC
ATCTTAGTTGCATATCACAAATTAGGAGGAGCTGTCTAATCTAGTCCAGG
AAACTAATGAAAGGGTTCCCATATTGCACATATTATGTCCAAATTTTAGT
ACGGATTCGTGCTGATATCTAAAGTCTGAATGTCRATAYGTATTTCACAT
GTCAATGTTAATCTTTTATTCATTTTTCTACTTTTCCTAATRGTAACGTT
ACTTTCAAGGGATCCTAAATGTTATGTYCTTCRCTTACGAGGCCTGCATG
TTCCAAACTATAATTTAAYGTACACTGTCAATCATATTTAATTGACGATG
ACTAACTTTCAAGTGCCTCAATTCTTTCAGTCGAAAGCGGTTCAGCGAGA
AACAAGCAGAACAGTGGTGGGCGGCAAATAGGGGTAGAGTATATCAGCAG
TACAATGTTCCGGTGGTTGAAAAATCCAGTATTCCGATGGGGAGAGAAGG
GTTAGCTCATTGA

Coding sequence (CDS) from alignment at MDC010657.494:3898..14210+

>MDP0000290099 ID=MDP0000290099; Name=MDP0000290099; organism=Malus x domestica; type=CDS; length=3582bp; location=Sequence derived from: MDC010657.494:3898..14210+ (Malus x domestica
ATGATTTCAAAGTTTGGATGCGYTCCTTTGCTGCTTTGTATGCTCGTCAT
GCTTATCGATACSGCTTATCTCTTGGTGCATTGTTTTGCAGTTACTGCTG
TTGATTCTGGAAGCAAGGCTTTGGAATTTTTACGTTTGCATGAACAAGAT
TACTGCATGCCAGGAATGACTGGCTATGATCTCCTCAGAAAGATTAAGAA
AACTAATAAAAAWTTATTYGATTTGCRGGAATCTAATGTGTTTAAAGACA
TACCAGTTGTTATWATGTCCTCARAGAATGAGCCATCAAGGATCAACAGT
GATCTCCATCGAGAAGTTCAATCGACGGCTCTGATTGAGTCTCCGGCGAG
GGAGAGGGCGAGAGTATTGGAGTTRCGGAAGGAGGCARTGGGAGGYGCAG
TGGTGGCGATGGAGGCCATCACTGCTCTGAAAAAGGGGGCACAATTGCTC
AAGTATGGACGCAGAGGGAAACCCAAATTTTGTCCTTTCAGGCTGTCCAA
TGATGAATCTKTTCTAATATGGTACTCAGGGAAMGAGGAGAAATATGTTA
AACTAACCCAAGTCTCRAGAATTGTACCTGGTCAGCGCACTCAAACCTTT
CAGAGGTATCCTCGGCCTGAAAAGGAATATCAGTCATTTTCTCTTATATA
TAATGATAGGTCTTTGGATTTGATATGCAAGGATAAAGATGAAGCTGAAG
TTTGGTTTACTGGTCTAAAAGCATTAATATCACGTGGCCTTCACCAGAAG
CGGAGAGCAGAATCAAGAAGTGGAGTTACATCTGAGGCAAATAGTCCTAG
ATCACACACCCAACAAAGTTCTCCATTGAGCTCTCCATTTTGTAGTGGTG
ATAGTTCGCAGAAGGATGGCGYGGAACCGTTTCATCTTCATGCTGCATTT
GAAAGCCCTCCTAAAATTGGTTTAGAGAAGGCTTTATCGGATGTCATGTT
GTATGCCCTGCCTCCAAAAATTCCCTTCCCTTCAGATGCTTCTTGTGGCT
CAGTCCCSTCTTCGGGAGGCTCAGATGGAATGAACGGACGAACAAAGGGT
GCMGGTGTGGATGCATTTAGAGTAAGTTTATCAAGTGCTGTTAGCTCATC
AAGTCAAGGCTCTGGTCATGATGAAGGTGATGCTTTAGCTTTAGGGGATG
TTTTCATTTGGGGGGAAGGCGTTGGTGATTGCTTTCTSGGTGGAGGATCA
CATAGAGTTGGAAGTTCTTCTGGTTGTAAGATGGATTCTTTTGTGCCTAA
AGTCTTGGAATCTGCCGTAGTGCTTGATGTCCAAAGCATAGCWTGTGGTG
GACGGCATGCTGCTTTTGTAACCAAGCAAGGGGAGGTATTTTCTTGGGGT
GAAGAATTAGGAGGCAGACTTGGACAWGGTGTGGATGCTGATGTTTCACA
TCCAAAACTCATAGATGCTCTGAAAAACATGAATATTGAATTATTAGCAT
GTGGAGAATACCATTCTTGTGCTGTCACACTTTCCGGTGACATGTACACA
TGGGGTGSCAGTAATTCCAATTTTGCACTCCTTGGTCATGGGTCTCAATC
AAGTCAATGGGTCCCAAAAAAGCTAAATGGACCTTTAGAGGGAATTCATG
TCTCATCGGTTTCATGTGGACCATGGCACACAGCTGTTGTGACCTCTGCT
GGGCAACTGTTTACTTTTGGCGATGGCACATTTGGTGTTCTAGGTCATGG
GGATCGAAAGAGCACTTCGGTGCCCAGGGAGGTTGATTCCCTTAAAGGTC
TCCGCACTGTGCGAGTAGCTTGTGGTGTTTGGCACACTGCAGCAGTAATT
GAAGTTATGGTGGGGTCATCAAGTTCCAGCAATTGCTCTTCTGGAAAGCT
TTTTACATGGGGAGATGGAGATAAAGGTCGACTTGGACACGGTGATAAGG
AAGCAAGACTTGTGCCCACTTGTGTTGCTGCTTTGGTTGAACCCAACTTY
TGTAAAGTTGCCTGCGGACAAAGCATGACTGTTGCACTTACAACTACGGG
CCATGTTTACACTATGGGAAGCCCTGTTTTTGGTCAATTAGGGGTCCCTA
AAGCWGATGGGAAACTTCCAAGACGTGTCGAGGGAAAGCTAATGAAGAGT
TTTGTYGAAGAAATTGCTTGTGGTGMTAATCATGTTGCRGTTTTAACTTC
AAGAACTGAAGTTTACACTTGGGGAAAGGGTGCAAATGGTCGATTAGGTC
TTGGGGATACAGAAGACAAATTTTCACCAACAYTAGTTGAAGCTTTAAAA
GACAAACAAGTCAARAGTATTGTCTGTGGYGCTAACTTTACTGCTGCTAT
CTGTCTTCACAAATGGGTCTCTRGYATTGATCAATCAATGTGTTCTGGCT
GTCGCCTTCCMTTTAATTTTAAAAGAAAAAGACACAATTGTTATAATTGT
GGACTTGTGYTATGCCATTCATGCAGCAGCAACAAGTGTCTCAAGGCKTC
CATGGCACCAAACCCAAACAAACCTTATCGTGTCTGTGATAACTGTTTTG
CAAAACTTAGGAAGGCCACTGAAACCAAYTCTTCATCTGGGTCTGCTATC
AGTAGAAGGGGAAGTATGAATCAGGGATTCAACGAACTGATTGAAAACAA
TGTTAAAGAAATGGAAAATGGATCTTCCAAAARCAACAAGAAAATGGATT
TCAGCAGCAATTGTGTTACTCCMATTGCAAATGGAGTTTCTGAGCGTCGC
RCRCTCAATGGGACTAAATCTTTCAACCCTGGATCATCCAAAAAGTTYTT
CTCTGCTTCRCTTCCTGGATCCAGAATTGCATCTCGRGCAACATCACCAA
CATCGAGACGATCTAGTCCACCTCGTTCCACAACACCAACCCCAGCTCTT
TCAGGGCTTACTTTTCCAAAAATTGGGGATGATGCTAAAAGGAAAAATGT
CAATCTAAGTGAAGAAGTTCTAAAATTAAAAGCTCAGGTTGAAGATCTTA
CTCATAAAGCTCAACTTCAAGACATTGAGATGGAAAAAACTACCCAACAG
TTGAAGGAGGCTCTGAAAGTAGCAGGGGAAGAAACTCTGAAATGCAAAGC
AGCGAAGGAAGTAATTAAGTCACTCACAGCCCAATTAAAGGAAATGGCTG
AAAGGTTACCAATTGGAACGGCAAGAAACATGGATACCCGTCCGTTAGAC
TCTTCCAGTCCCACTCATGAAGTTTCTACTACAGCCGTCGAGAAAACAAG
CAGTCTATTGAATTTCCATGAACCTTATTCAGTTGTATCGGACAGTGTGA
TGATTTCTGGTGTGCCACGGGCCACTTCGAATCACACAGAAGTGTCACAT
TCAGAAGCAACAGCTAGGCATAAAAACAGAGGAACAAAGACTGAAATAGC
ACAAGGGGACGAGTGGGTTGAGCAAGATGAGCCTGGTGTATATATTACCC
TTGTTTCCTTGCCTGGAGGTGTCAAAGATCTCAAGCGTGTTCGTTTCAGT
CGAAAGCGGTTCAGCGAGAAACAAGCAGAACAGTGGTGGGCGGCAAATAG
GGGTAGAGTATATCAGCAGTACAATGTTCCGGTGGTTGAAAAATCCAGTA
TTCCGATGGGGAGAGAAGGGTTAGCTCATTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000306	Znf_FYVE
IPR000408	Reg_chr_condens
IPR009091	RCC1/BLIP-II
IPR011011	Znf_FYVE_PHD
IPR011993	PH-like_dom_sf
IPR013083	Znf_RING/FYVE/PHD
IPR013591	Brevis_radix_dom
IPR017455	Znf_FYVE-rel

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding