MDP0000296871, MDP0000296871 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000296871
Unique Name	MDP0000296871
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	4035

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr7	chromosome	chr7:25614042..25618076 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC013149.567	contig	MDC013149.567:31675..35709 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000296871_exon_1	MDP0000296871_exon_1	Malus x domestica	CDS
MDP0000296871_exon_2	MDP0000296871_exon_2	Malus x domestica	CDS
MDP0000296871_exon_3	MDP0000296871_exon_3	Malus x domestica	CDS
MDP0000296871_exon_4	MDP0000296871_exon_4	Malus x domestica	CDS
MDP0000296871_exon_5	MDP0000296871_exon_5	Malus x domestica	CDS
MDP0000296871_exon_6	MDP0000296871_exon_6	Malus x domestica	CDS
MDP0000296871_exon_7	MDP0000296871_exon_7	Malus x domestica	CDS
MDP0000296871_exon_8	MDP0000296871_exon_8	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000296871	MDP0000296871	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000195	Rab-GTPase-TBC domain	PFAM	PF00566	RabGAP-TBC	coord: 380..500 score: 1.1
IPR000195	Rab-GTPase-TBC domain	SMART	SM00164	Domain in Tre-2, BUB2p, and Cdc16p. Probable	coord: 144..527 score: 5.1
IPR000195	Rab-GTPase-TBC domain	PROFILE	PS50086	TBC_RABGAP	coord: 147..501 score: 31
IPR000195	Rab-GTPase-TBC domain	SUPERFAMILY	47923	Ypt/Rab-GAP domain of gyp1p	coord: 120..461 score: 5e-42coord: 436..579 score: 1.2
None	No IPR available	COIL	coil	coiled-coil	coord: 170..198 score
None	No IPR available	GENE3D	1.10.8.270	no description	coord: 324..427 score: 6.6
None	No IPR available	PANTHER	PTHR22957	FAMILY NOT NAMED	coord: 47..579 score: 3.7e
None	No IPR available	PANTHER	PTHR22957:SF31	GTPASE ACTIVATOR PROTEIN OF RAB-LIKE SMALL GTPASES-LIKE PROTEIN	coord: 47..579 score: 3.7e
None	No IPR available	SEG	seg	seg	coord: 4..16 score: NAcoord: 25..41 score: NAcoord: 55..77 score: NAcoord: 83..99 score: NAcoord: 242..257 score: NAcoord: 270..278 score: NAcoord: 614..619 score
None	No IPR available	SEG	seg	seg	coord: 51..76 score
None	No IPR available	SEG	seg	seg	coord: 35..46 score
None	No IPR available	SEG	seg	seg	coord: 19..36 score
None	No IPR available	SEG	seg	seg	coord: 66..77 score
None	No IPR available	SEG	seg	seg	coord: 25..38 score
None	No IPR available	SEG	seg	seg	coord: 5..15 score
None	No IPR available	SEG	seg	seg	coord: 5..17 score: NAcoord: 37..49 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr7:25614042..25618076+
mRNA from alignment at MDC013149.567:31675..35709+
coding sequence from alignment at MDC013149.567:31675..35709+

mRNA sequence

>MDP0000296871 ID=MDP0000296871; Name=MDP0000296871; organism=Malus x domestica; type=mRNA; length=4035bp
ATGATCCCCTCCGGTTCCGGGAACGCCTTCATCTCCGGCGGAGGCGGGTT
ATGGTCGGCGGCACCGTCGTACGTTGCCGTCGGCGTCACGGCCTTGGCTG
GGCTCGCGGTGGTCGTGGCCGTGTTCAGCACTGCCACTAGGTAAACAAAG
CTTTGAAATTTATCAGAAAAGCTCTGAAATTTCTTGAAAAACGCAAACCC
TTGAACAAAAATTCACTGATAAATGAGAGCTCTACGACGAACTCAGACTT
CCTCGTCGCCTTCGAGCTCGAATTCATCTCATTCTTCGTCTTCGCTGTCG
TCGTCGTCGTCGTCTTCGTGGATTTATTTGCGTTCGGTTCTGTTAATCGT
GTCCTCTTCCTCACCAGCTCATTGTTCTTCCTCTGATCGGTGAGTCTCTC
TCTCTAAAGCTTTTGTTTTCGGTAATTTCCGCTCTTAGATCCCGATCTCG
GGAAGCTTCAAGTTCATGTTTTTAGTACCAATTTTAGCTCAGTTCCACTG
TTTTAATGGCGTTTTCGCTTGGATCCCTTCTTTCGGGTCACCTTCTTCAT
TCGCATTTTGGTCCTCCTTGGAAATTGTTACTCTTTCAGTTGCTTAAAAA
ATTGTGGGTTCGATGGATTGGGCAAGCCGCATTGGTTGTTTCTTTTGCGC
ATCGATTTGCTTCTGGAAGATTTGTGTTGTTTTTGTTTCGTGGTTCTAGC
AAAGTTAGGATTTTTATGTTTTAATATTATAAGTGTTTGAATTTTGTATA
TTAAGCTGCCATTGAGCAACAATGCTGTGGTTTAATAAGTCAAAGATTGA
TAAACCCGAATCGATGTTAGCTTTTACTAATCTTCTCAACAGATGGATGG
ATTGAAATGTTTTGGATATTCAAAGTCAATTAATTAAGCTGCAAAGCTAT
TGCATTTATCTGCAGTTTAACTTTAATCCCTGTTGAAAATTTTCTTTGAC
TTGGCCCTTCGAGTGCATGCTTATGCAGAATATCCACACTTTTGAAGCGG
TCTAATTTGGTTTTCGTTTACTGCCAGACCCTTTCTTTTATATGTTTTTA
TTGGCCTGACATTTTCATTCATTCATACATTGATATTTTTCGTATAGCTG
ATGCTTCCTTAATCGTACCATTACTAATTGCGCTTATTGTTTTATTTTCA
GCGTTCGTCTTAAGTCACCTTGGTCCCGCAGGAAAAGAAAACATGCCCTT
TCAGCTCAGCAATGGAGGCTTTTCTTTACACCAGATGGAAAGCTTCGCGA
TGGTGGAGTTAAGTTGGTGAAGAAAGTTCGCAGTGGAGTGAGTTTCTGTC
ACTTTTGTGTTATATATTTGCTATCAAAATGCCGTAACATCTATTCATGG
TTCCAACTTCCATCATTGACATTATTCATCTTAAAATTTCGTGAATGCAG
GGTGTTGATCCAAGTATTAGAGCAGAAGTTTGGCCATTTCTCCTTGGAGT
GTAAGCATGCTCAACACCTCTTTTAAGTTTTTAACTGAAACATTGCTACA
TTAATACCTTGCATCTCCGAGATAGAACTTGTTATGTGCTTCCAACATCA
GGTGTTTTGGTGTATCATTCCTGGCAGAGGATTGTATGCTCTTTCTCTCC
TATTAGTCTGGATCATTGCTTTTAGACATGTCATTAGGTCCAAGTCAAAC
ATACTGACTGCTAGATATATGAGCTTTTATTTAGGTCTGGTTATGGCTTC
AGAGAAGTTCATTTTAGGCTTTAGACCTGACATTTCTGCTTTTGAACTAT
TCGCTGCATAATCAATGTGGAGTTAAAGTTTCAGAAAAGTGTTCTTTTTT
TTTTCCTCCACGTAATATGAGTAATGCGATTCCTTCTGAATTGATGGCAT
GAGTTTTGGAAATAAAATCTGCAAGTATACCTTGGTCAAAACTTAAATTA
TTCCTGTGATTATGTCTTTAATGCCATTATCATATTCATATATGACCATC
GTACTGATTCCTGTTCTGCATATACATTAAAATGTTGTGTTGTTTTCGGG
AAGTGCGAAACCATACTTACATATGTTGACTGGATTTCTGTCTCGACTCT
CAACAGCTATGAATTAAACAGTTCAAAAGAAGAAAGGGAGATAGTACGAT
CTCAGAAAAGGTAATAGTGCCAAGTTCATCTAGTTCTTTTGTAGCTTCAT
ATTGCATAAGTTGATTGAAGCTTTTTCCAGTTTGAGTAATATTTTTTATT
ATCCATTGGCTTTGCTAACTTTATGGTACATTGTTCGAATATTTGGTTGC
AGAAAGGAATATGAGAAACTCCGCAGACAGTGCCGCCGACTCATAAAGCG
CGAAAATGATAGCTCTAAGTTGAATGGGGACGGTAGTAGATTCACCCATG
ATACAGGTTCTCCCAGCTCTGAGGATGTGGTTAGCGCCAGGGAATCCCTT
TCTAGTGAAGATAAGATACCAGATGTTGAATACTCAGATGACCCTTCCAG
TACATTGTTGGATGGAGATGATGATGGTTCAAGAGAAAACACAAATGCTG
ATTCCAAAGCAGTAAACTCTGACTCGTCTGACTCGGATTCCTCTGAAGAA
CCTGAGGTGATTCATGCTTTCCCCTCATGTGAAGGGAGGGAAGAAAATGA
TCATGACGTGACTTCCAAGGATGAATCTTCTCCCTTGAGGACAGAGGTCC
AATCAAATCTAAACATTGAGGATTTTGCCACCTGGCAGCGGATCATACGC
CTTGATGCGGTACGGACTAATTCAGATTGGATTCCGCACGCCCCATCTCA
AGCTGAAGTGTCACAGGATAGGGCATCACGTACTGCTGAGGCTGTTGGGT
TGAAAGATTACAGTCACTTGGAGCCTTGCAGAATTTTCCATGCTGCTAGA
CTAGTTGCTATTCTTGAAGCATATGCACTCTATGACCCCGAAATTGGTTA
CTGCCAGGGCATGAGTGACCTGCTTTCTCCTATAGCTGCTGTAATAACAG
AGGATCACGAGGCTTTCTGGTGTTTTGTCGGTTTCATGAAGAAGGCTCGA
CATAATTTTAGGCTTGACGAGGTAGGGATCCGAAGGCAGTTGAGTATCGT
TTCTAAAATTATCAAATGCAAGGACTCCCATCTATACAGGCACTTGGAGA
AGCTCCAGGCGGAGGATTGCTTTTTCGTTTATAGGATGGTGGTTGTGCTA
TTTAGGAGGGAGTTGACGTTCGAACAGACAGTATGCCTATGGGAGGTAAT
GTGGGCCGATCAAGCAGCCATAAGGGCAGGTATCGGAAAATCTGCATGGA
GCAGGATAAGGCAACGAGCCCCACCAACAGACGATCTGTTACTCTTCGCC
ATCGCAGCTTCTGTATTGCAGAAGAGGAAGCTGATAATCGAGAAGTATAG
CAGCATGGATGAGATTATCCGGGAGTGCAATAGCATCTCGGGGCAACTCG
ATATATGGAAGCTCCTGGACGATGCACATGACCTGGTAGTAAACCTCCAT
GACAAGATAGAGACATCTTTCTCATGACTGCATATTTCGGTAGCATAGTT
CGTTCTTATGGTTCATTCTCGGCATCCTGTTATTCGGAGCATCCAAATTC
CTCGTTCCTTCTTTCCTCTTTCACAACATAAGCACTTCGGGAGCTCACTC
CGACCAGACTATCTATCTTCAAGCTTGCTTAAAAGTGGCGGTGTCAAAAC
TTTCGAACGATTAACTATTCAGATTTACCTGCATTGTATTCTGCTCTGTT
TTTACCGCGCGATTCCACGATTTGCAGGTAAAACTCCTGTATTAGCATTT
ACCATTTATCCGTTAATGTAACCATACTCCCATACTGGATGAGGAGCACA
TTTTCATGTGTTCCCAAATTGTCCAATTAGAAATAATACCATTCTCCTAT
ATAGGCCCTTGCAGTTCAGTGTTCCTTTGGTGGTTGGATATGTAAATTAT
TATCTAGTTGGGGCTATTTTCGACCCTTTTGTGCAATACGAGCCTTTGAA
TTGCTCCAGTTTCGTCGAGTTTCGATCCCTTAAAGAATGGATTCGGTCGG
TAGGAATGTCATACCAAACACTGAATTATGTATAA

protein sequence of MDP0000296871

>MDP0000296871 ID=MDP0000296871; Name=MDP0000296871; organism=Malus x domestica; type=polypeptide; length=693bp
MIPSGSGNAFISGGGGLWSAAPSYVAVGVTALAGLAVVVAVFSTATRALR
RTQTSSSPSSSNSSHSSSSLSSSSSSSWIYLRSVLLIVSSSSPAHCSSSD
RVRLKSPWSRRKRKHALSAQQWRLFFTPDGKLRDGGVKLVKKVRSGGVDP
SIRAEVWPFLLGVYELNSSKEEREIVRSQKRKEYEKLRRQCRRLIKREND
SSKLNGDGSRFTHDTGSPSSEDVVSARESLSSEDKIPDVEYSDDPSSTLL
DGDDDGSRENTNADSKAVNSDSSDSDSSEEPEVIHAFPSCEGREENDHDV
TSKDESSPLRTEVQSNLNIEDFATWQRIIRLDAVRTNSDWIPHAPSQAEV
SQDRASRTAEAVGLKDYSHLEPCRIFHAARLVAILEAYALYDPEIGYCQG
MSDLLSPIAAVITEDHEAFWCFVGFMKKARHNFRLDEVGIRRQLSIVSKI
IKCKDSHLYRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTVCLWEVMWAD
QAAIRAGIGKSAWSRIRQRAPPTDDLLLFAIAASVLQKRKLIIEKYSSMD
EIIRECNSISGQLDIWKLLDDAHDLFVLMVHSRHPVIRSIQIPRSFFPLS
QHKHFGSSLRPDYLSSSLLKSGGVKTFERLTIQIYLHCILLCFYRAIPRF
AVGAIFDPFVQYEPLNCSSFVEFRSLKEWIRSVGMSYQTLNYV

mRNA from alignment at chr7:25614042..25618076+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000296871 ID=MDP0000296871; Name=MDP0000296871; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr7:25614042..25618076+ (Malus x domestica

mRNA from alignment at MDC013149.567:31675..35709+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000296871 ID=MDP0000296871; Name=MDP0000296871; organism=Malus x domestica; type=mRNA; length=4035bp; location=Sequence derived from: MDC013149.567:31675..35709+ (Malus x domestica
ATGATCCCCTCCGGTTCCGGGAACGCCTTCATCTCCGGCGGAGGCGGGTT
ATGGTCGGCGGCACCGTCGTACGTTGCCGTCGGCGTCACGGCCTTGGCTG
GGCTCGCGGTGGTCGTGGCCGTGTTCAGCACTGCCACTAGGTAAACAAAG
CTTTGAAATTTATCAGAAAAGCTCTGAAATTTCTTGAAAAACGCAAACCC
TTGAACAAAAATTCACTGATAAATGAGAGCTCTACGACGAACTCAGACTT
CCTCGTCGCCTTCGAGCTCGAATTCATCTCATTCTTCGTCTTCGCTGTCG
TCGTCGTCGTCGTCTTCGTGGATTTATTTGCGTTCGGTTCTGTTAATCGT
GTCCTCTTCCTCACCAGCTCATTGTTCTTCCTCTGATCGGTGAGTCTCTC
TCTCTAAAGCTTTTGTTTTCGGTAATTTCCGCTCTTAGATCCCGATCTCG
GGAAGCTTCAAGTTCATGTTTTTAGTACCAATTTTAGCTCAGTTCCACTG
TTTTAATGGCGTTTTCGCTTGGATCCCTTCTTTCGGGTCACCTTCTTCAT
TCGCATTTTGGTCCTCCTTGGAAATTGTTACTCTTTCAGTTGCTTAAAAA
ATTGTGGGTTCGATGGATTGGGCAAGCCGCATTGGTTGTTTCTTTTGCGC
ATCGATTTGCTTCTGGAAGATTTGTGTTGTTTTTGTTTCGTGGTTCTAGC
AAAGTTAGGATTTTTATGTTTTAATATTATAAGTGTTTGAATTTTGTATA
TTAAGCTGCCATTGAGCAACAATGCTGTGGTTTAATAAGTCAAAGATTGA
TAAACCCGAATCGATGTTAGCTTTTACTAATCTTCTCAACAGATGGATGG
ATTGAAATGTTTTGGATATTCAAAGTCAATTAATTAAGCTGCAAAGCTAT
TGCATTTATCTGCAGTTTAACTTTAATCCCTGTTGAAAATTTTCTTTGAC
TTGGCCCTTCGAGTGCATGCTTATGCAGAATATCCACACTTTTGAAGCGG
TCTAATTTGGTTTTCGTTTACTGCCAGACCCTTTCTTTTATATGTTTTTA
TTGGCCTGACATTTTCATTCATTCATACATTGATATTTTTCGTATAGCTG
ATGCTTCCTTAATCGTACCATTACTAATTGCGCTTATTGTTTTATTTTCA
GCGTTCGTCTTAAGTCACCTTGGTCCCGCAGGAAAAGAAAACATGCCCTT
TCAGCTCAGCAATGGAGGCTTTTCTTTACACCAGATGGAAAGCTTCGCGA
TGGTGGAGTTAAGTTGGTGAAGAAAGTTCGCAGTGGAGTGAGTTTCTGTC
ACTTTTGTGTTATATATTTGCTATCAAAATGCCGTAACATCTATTCATGG
TTCCAACTTCCATCATTGACATTATTCATCTTAAAATTTCGTGAATGCAG
GGTGTTGATCCAAGTATTAGAGCAGAAGTTTGGCCATTTCTCCTTGGAGT
GTAAGCATGCTCAACACCTCTTTTAAGTTTTTAACTGAAACATTGCTACA
TTAATACCTTGCATCTCCGAGATAGAACTTGTTATGTGCTTCCAACATCA
GGTGTTTTGGTGTATCATTCCTGGCAGAGGATTGTATGCTCTTTCTCTCC
TATTAGTCTGGATCATTGCTTTTAGACATGTCATTAGGTCCAAGTCAAAC
ATACTGACTGCTAGATATATGAGCTTTTATTTAGGTCTGGTTATGGCTTC
AGAGAAGTTCATTTTAGGCTTTAGACCTGACATTTCTGCTTTTGAACTAT
TCGCTGCATAATCAATGTGGAGTTAAAGTTTCAGAAAAGTGTTCTTTTTT
TTTTCCTCCACGTAATATGAGTAATGCGATTCCTTCTGAATTGATGGCAT
GAGTTTTGGAAATAAAATCTGCAAGTATACCTTGGTCAAAACTTAAATTA
TTCCTGTGATTATGTCTTTAATGCCATTATCATATTCATATATGACCATC
GTACTGATTCCTGTTCTGCATATACATTAAAATGTTGTGTTGTTTTCGGG
AAGTGCGAAACCATACTTACATATGTTGACTGGATTTCTGTCTCGACTCT
CAACAGCTATGAATTAAACAGTTCAAAAGAAGAAAGGGAGATAGTACGAT
CTCAGAAAAGGTAATAGTGCCAAGTTCATCTAGTTCTTTTGTAGCTTCAT
ATTGCATAAGTTGATTGAAGCTTTTTCCAGTTTGAGTAATATTTTTTATT
ATCCATTGGCTTTGCTAACTTTATGGTACATTGTTCGAATATTTGGTTGC
AGAAAGGAATATGAGAAACTCCGCAGACAGTGCCGCCGACTCATAAAGCG
CGAAAATGATAGCTCTAAGTTGAATGGGGACGGTAGTAGATTCACCCATG
ATACAGGTTCTCCCAGCTCTGAGGATGTGGTTAGCGCCAGGGAATCCCTT
TCTAGTGAAGATAAGATACCAGATGTTGAATACTCAGATGACCCTTCCAG
TACATTGTTGGATGGAGATGATGATGGTTCAAGAGAAAACACAAATGCTG
ATTCCAAAGCAGTAAACTCTGACTCGTCTGACTCGGATTCCTCTGAAGAA
CCTGAGGTGATTCATGCTTTCCCCTCATGTGAAGGGAGGGAAGAAAATGA
TCATGACGTGACTTCCAAGGATGAATCTTCTCCCTTGAGGACAGAGGTCC
AATCAAATCTAAACATTGAGGATTTTGCCACCTGGCAGCGGATCATACGC
CTTGATGCGGTACGGACTAATTCAGATTGGATTCCGCACGCCCCATCTCA
AGCTGAAGTGTCACAGGATAGGGCATCACGTACTGCTGAGGCTGTTGGGT
TGAAAGATTACAGTCACTTGGAGCCTTGCAGAATTTTCCATGCTGCTAGA
CTAGTTGCTATTCTTGAAGCATATGCACTCTATGACCCCGAAATTGGTTA
CTGCCAGGGCATGAGTGACCTGCTTTCTCCTATAGCTGCTGTAATAACAG
AGGATCACGAGGCTTTCTGGTGTTTTGTCGGTTTCATGAAGAAGGCTCGA
CATAATTTTAGGCTTGACGAGGTAGGGATCCGAAGGCAGTTGAGTATCGT
TTCTAAAATTATCAAATGCAAGGACTCCCATCTATACAGGCACTTGGAGA
AGCTCCAGGCGGAGGATTGCTTTTTCGTTTATAGGATGGTGGTTGTGCTA
TTTAGGAGGGAGTTGACGTTCGAACAGACAGTATGCCTATGGGAGGTAAT
GTGGGCCGATCAAGCAGCCATAAGGGCAGGTATCGGAAAATCTGCATGGA
GCAGGATAAGGCAACGAGCCCCACCAACAGACGATCTGTTACTCTTCGCC
ATCGCAGCTTCTGTATTGCAGAAGAGGAAGCTGATAATCGAGAAGTATAG
CAGCATGGATGAGATTATCCGGGAGTGCAATAGCATCTCGGGGCAACTCG
ATATATGGAAGCTCCTGGACGATGCACATGACCTGGTAGTAAACCTCCAT
GACAAGATAGAGACATCTTTCTCATGACTGCATATTTCGGTAGCATAGTT
CGTTCTTATGGTTCATTCTCGGCATCCTGTTATTCGGAGCATCCAAATTC
CTCGTTCCTTCTTTCCTCTTTCACAACATAAGCACTTCGGGAGCTCACTC
CGACCAGACTATCTATCTTCAAGCTTGCTTAAAAGTGGCGGTGTCAAAAC
TTTCGAACGATTAACTATTCAGATTTACCTGCATTGTATTCTGCTCTGTT
TTTACCGCGCGATTCCACGATTTGCAGGTAAAACTCCTGTATTAGCATTT
ACCATTTATCCGTTAATGTAACCATACTCCCATACTGGATGAGGAGCACA
TTTTCATGTGTTCCCAAATTGTCCAATTAGAAATAATACCATTCTCCTAT
ATAGGCCCTTGCAGTTCAGTGTTCCTTTGGTGGTTGGATATGTAAATTAT
TATCTAGTTGGGGCTATTTTCGACCCTTTTGTGCAATACGAGCCTTTGAA
TTGCTCCAGTTTCGTCGAGTTTCGATCCCTTAAAGAATGGATTCGGTCGG
TAGGAATGTCATACCAAACACTGAATTATGTATAA

Coding sequence (CDS) from alignment at MDC013149.567:31675..35709+

>MDP0000296871 ID=MDP0000296871; Name=MDP0000296871; organism=Malus x domestica; type=CDS; length=2082bp; location=Sequence derived from: MDC013149.567:31675..35709+ (Malus x domestica
ATGATCCCCTCCGGTTCCGGGAACGCCTTCATCTCCGGCGGAGGCGGGTT
ATGGTCGGCGGCACCGTCGTACGTTGCCGTCGGCGTCACGGCCTTGGCTG
GGCTCGCGGTGGTCGTGGCCGTGTTCAGCACTGCCACTAGAGCTCTACGA
CGAACTCAGACTTCCTCGTCGCCTTCGAGCTCGAATTCATCTCATTCTTC
GTCTTCGCTGTCGTCGTCGTCGTCGTCTTCGTGGATTTATTTGCGTTCGG
TTCTGTTAATCGTGTCCTCTTCCTCACCAGCTCATTGTTCTTCCTCTGAT
CGCGTTCGTCTTAAGTCACCTTGGTCCCGCAGGAAAAGAAAACATGCCCT
TTCAGCTCAGCAATGGAGGCTTTTCTTTACACCAGATGGAAAGCTTCGCG
ATGGTGGAGTTAAGTTGGTGAAGAAAGTTCGCAGTGGAGGTGTTGATCCA
AGTATTAGAGCAGAAGTTTGGCCATTTCTCCTTGGAGTCTATGAATTAAA
CAGTTCAAAAGAAGAAAGGGAGATAGTACGATCTCAGAAAAGAAAGGAAT
ATGAGAAACTCCGCAGACAGTGCCGCCGACTCATAAAGCGCGAAAATGAT
AGCTCTAAGTTGAATGGGGACGGTAGTAGATTCACCCATGATACAGGTTC
TCCCAGCTCTGAGGATGTGGTTAGCGCCAGGGAATCCCTTTCTAGTGAAG
ATAAGATACCAGATGTTGAATACTCAGATGACCCTTCCAGTACATTGTTG
GATGGAGATGATGATGGTTCAAGAGAAAACACAAATGCTGATTCCAAAGC
AGTAAACTCTGACTCGTCTGACTCGGATTCCTCTGAAGAACCTGAGGTGA
TTCATGCTTTCCCCTCATGTGAAGGGAGGGAAGAAAATGATCATGACGTG
ACTTCCAAGGATGAATCTTCTCCCTTGAGGACAGAGGTCCAATCAAATCT
AAACATTGAGGATTTTGCCACCTGGCAGCGGATCATACGCCTTGATGCGG
TACGGACTAATTCAGATTGGATTCCGCACGCCCCATCTCAAGCTGAAGTG
TCACAGGATAGGGCATCACGTACTGCTGAGGCTGTTGGGTTGAAAGATTA
CAGTCACTTGGAGCCTTGCAGAATTTTCCATGCTGCTAGACTAGTTGCTA
TTCTTGAAGCATATGCACTCTATGACCCCGAAATTGGTTACTGCCAGGGC
ATGAGTGACCTGCTTTCTCCTATAGCTGCTGTAATAACAGAGGATCACGA
GGCTTTCTGGTGTTTTGTCGGTTTCATGAAGAAGGCTCGACATAATTTTA
GGCTTGACGAGGTAGGGATCCGAAGGCAGTTGAGTATCGTTTCTAAAATT
ATCAAATGCAAGGACTCCCATCTATACAGGCACTTGGAGAAGCTCCAGGC
GGAGGATTGCTTTTTCGTTTATAGGATGGTGGTTGTGCTATTTAGGAGGG
AGTTGACGTTCGAACAGACAGTATGCCTATGGGAGGTAATGTGGGCCGAT
CAAGCAGCCATAAGGGCAGGTATCGGAAAATCTGCATGGAGCAGGATAAG
GCAACGAGCCCCACCAACAGACGATCTGTTACTCTTCGCCATCGCAGCTT
CTGTATTGCAGAAGAGGAAGCTGATAATCGAGAAGTATAGCAGCATGGAT
GAGATTATCCGGGAGTGCAATAGCATCTCGGGGCAACTCGATATATGGAA
GCTCCTGGACGATGCACATGACCTGTTCGTTCTTATGGTTCATTCTCGGC
ATCCTGTTATTCGGAGCATCCAAATTCCTCGTTCCTTCTTTCCTCTTTCA
CAACATAAGCACTTCGGGAGCTCACTCCGACCAGACTATCTATCTTCAAG
CTTGCTTAAAAGTGGCGGTGTCAAAACTTTCGAACGATTAACTATTCAGA
TTTACCTGCATTGTATTCTGCTCTGTTTTTACCGCGCGATTCCACGATTT
GCAGTTGGGGCTATTTTCGACCCTTTTGTGCAATACGAGCCTTTGAATTG
CTCCAGTTTCGTCGAGTTTCGATCCCTTAAAGAATGGATTCGGTCGGTAG
GAATGTCATACCAAACACTGAATTATGTATAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000195	Rab-GAP-TBC_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005097	Rab GTPase activator activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure

Vocabulary: **Biological Process**
Term	Definition
GO:0032313	regulation of Rab GTPase activity