MDP0000561738, MDP0000561738 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000561738
Unique Name	MDP0000561738
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	6069

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr13	chromosome	chr13:29305782..29311850 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC009168.711	contig	MDC009168.711:11396..17464 +	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
KEGG/KAAS of Malus x domestica Whole Genome v1.0	2012-04-02

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000561738_exon_1	MDP0000561738_exon_1	Malus x domestica	CDS
MDP0000561738_exon_2	MDP0000561738_exon_2	Malus x domestica	CDS
MDP0000561738_exon_3	MDP0000561738_exon_3	Malus x domestica	CDS
MDP0000561738_exon_4	MDP0000561738_exon_4	Malus x domestica	CDS
MDP0000561738_exon_5	MDP0000561738_exon_5	Malus x domestica	CDS
MDP0000561738_exon_6	MDP0000561738_exon_6	Malus x domestica	CDS
MDP0000561738_exon_7	MDP0000561738_exon_7	Malus x domestica	CDS
MDP0000561738_exon_8	MDP0000561738_exon_8	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000561738	MDP0000561738	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001362	Glycoside hydrolase, family 32	SMART	SM00640	Glycosyl hydrolases family	coord: 165..658 score: 1.1e
IPR008985	Concanavalin A-like lectin/glucanase	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 501..700 score: 1
IPR013148	Glycosyl hydrolases family 32, N-terminal	PFAM	PF00251	Glyco_hydro_32N	coord: 195..501 score: 3.4e
IPR013189	Glycosyl hydrolase family 32, C-terminal	PFAM	PF08244	Glyco_hydro_32C	coord: 573..658 score: 1.4
IPR023296	Glycosyl hydrolase family 43, five-bladed beta-propellor domain	GENE3D	2.115.10.20	no description	coord: 199..378 score: 7.5
IPR023296	Glycosyl hydrolase family 43, five-bladed beta-propellor domain	SUPERFAMILY	75005	Arabinanase/levansucrase/invertase	coord: 154..502 score: 2.5e
None	No IPR available	GENE3D	2.60.120.560	no description	coord: 486..700 score: 2.1
None	No IPR available	SEG	seg	seg	coord: 12..28 score: NAcoord: 29..44 score: NAcoord: 92..108 score
None	No IPR available	SEG	seg	seg	coord: 3..20 score: NAcoord: 48..61 score
None	No IPR available	SEG	seg	seg	coord: 43..54 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr13:29305782..29311850+
mRNA from alignment at MDC009168.711:11396..17464+
coding sequence from alignment at MDC009168.711:11396..17464+

mRNA sequence

>MDP0000561738 ID=MDP0000561738; Name=MDP0000561738; organism=Malus x domestica; type=mRNA; length=6069bp
ATGAAGCAGTCAACGAACACATCTCCTTTCACCGCCTTAGCAGTGAGGAC
TTCTGCAATCAAGGTATACTGAAACCCTAATAGAGCACCTTCGACATCCT
TTCTCTCAATACACACGCCTCCCAGTTCTTTCTCAGACAGGATGAGGTTG
ATCCCAAATCGTGTCCCCAACTCCTCTAAGTCCTCATTCGGACTTCCTCC
AGCCATGGCCAGTTAAAAGAACCGCACCCCACTCACCCCCCAGAGGCCAC
CACCACAAGCACCAGCCACCGTACCTTATCTCCTCTCAGATCTCCACCAG
ATCCAGATCTCCGCACCTGGGCAGGCCGCCCTCGAGCCGCCAGTGGAACA
ACTTTGCTCGCCGTTCCCCAGTCAATCACGACAGCCGAGCCAAGTCCCCG
GATTCGCAACCAGAGCTTCGAGAAGGAGGGACTAGCCGGTCAGATCTCGG
ACAACGATTCAACTACAGGACGCGCTCGTCGACGGAGCACCGCACTCCTC
CTTTCGAGGCACTCTTGGAGATAGGTTATTGAGGTAGGGAATTTTGGAAC
TGATTATTTTATATAAATCTGAGAAAACTCTGCCAAGCGTATAAGTTAAT
TACCAATTTGTTTTTAGTCGGGCACGAAGTTTTAGACCAGCATCTTGAGT
GATGTACAAGGGATAGAACAAGTTGAAGTTAATGAATGATTATGTTATGC
ATGGTTGACTGTTTTTTAATATTAAGCTAGAAGCTATATAGGGGACATGA
ACTGAAAGCACTTGCAAAATCGACTGGGTCGTCTCAATGTGTTAAAATGC
GTTCTTTTTTTGGGAGAACAAAAAAAAATAAAAAAAAATAAAGCGTTCTT
TAGATCTTCATCATTTGGCACTTCTATATATTTATAAGACCTCGAATGCA
TGAGTACATGCTTTTAATCACGTGAATTATAATTTACTCTTTTATCTTGT
CATCTTTTGTTTGTTTAACATTATTCTTGATTTGATTACCAAAAAGAAAA
ATGGGAAGTTCAAATTTGTTTTTCATAGTGCCATAAATAGTAGTTTACAG
TATTTTTTCATGGTTCGTACTACTGAGTAGGCCTGTCATTTTGGACCAAA
CCCGTTAACCCGATCCGACCCAACCCGTTAATATTTGTATTTGGATGGAT
GCTTAACGGGTCGAGTCGGGTCGCTAACGGGTGAACCCGTTAACAACCCG
TTAAATAACGGGTCACTTTGGGTCAACCCGTTAGACCCATTGGGACCCGT
TAACACCCGTTAGCACCCGTTAGTTGAGGATATTTTAGTAATTTTAGTAA
AATCTTAATAACAAAAAATAAACTTTATGCAAAAAAAAATAATAATAATA
ATTGTTAACGGGTGAAACGGGTGACCCGTTAGCTTAACGGGTCGGGTTCG
GGTGATCCGTTAACTTAACGGGTCGGGTTGAATCCGACCCAAACCCAATA
AACCCGACTCGTTTACAGGTCTACCACTGAGTGATTCTAAAAATTATTAG
CAGCTTGATTTTGCATATAGAGATCTCATATTTGTTTGCAACCATTAAAT
TTTGCATATAAGACATAATATTGTAGCCGAATAACTTTTGAAGATTATTA
AACAAAAAATGAACACGCAAGTATAATTGTTTGGTGTAGAGAAAACCCTT
TTCTAATAGAGGTGTGATATCCACATACTCATTTTTACTTTTCTCACACC
TTTTTTATTTTCGGCCGTAAGATTGAATGAATTGAAGAAGATTAACGAAT
AGAAATTAATAAGAAGTATGTGAGAAGTAAAAAATGGTGTATGGATAACA
TATCCCTTTCTAATACCATCTAACCAGAATGGATAAAAAGAAAGAAAGAA
AATGCAACCCTTTACTTTTGAATTTTTTATTTGAAGAGATCAACTAGGCT
GCTAATTTCTTGTCCTAAAGTTTACTTTTCCTCCTTCAGATCTTATGATG
AGACATCACTCTGCAATGACTTTTTGTTCTTTATCTCACATCTAACCATC
CACCCTTAGCCTTGACTACTCCTATAAATACACCGGAGAGTGTTCCCTTA
TTTTCTCATCCTCACAAACACAAAGCCACCATGTCTGTCTCCTCTCTCTT
TCTCTACTGCTTTCTCTGTCTTTGGCTAGGCCATGCTGTTCTTCGGCTTG
AAGCTTCCCACCATGTTTACAGAAGCCTTCAAACTTCCGAGCTAACTTCC
TCACATCAAGATACTGAACCCTACAGAACTGGTTATCATTTCCAACCTCC
CAAGAACTGGATCAATGGTATATTTTTATATCCCCTTTAATTTTCTTCAT
TAATTTATTCTAGTTTTTGTTCATATATTTTCATTCTTTTTCTATCACCC
GTCATTTTTATTGTTTATAACTCTAACATTTGTTTTCTTGCTTCTCGTTT
TTGACATTGACTTGTTCTAATTGTGGAATGGACAAATCGGCTTGTTTGGT
TGCACAGATCCTAATGGTTAGTTTGTCTCTCCTATTGTTCTATTTTCTTC
AAAAAATATTTTGTGCAATTAGTACTCTTCTCTTACATTTCTGGGTTTAG
TGTATGGGCTTTCAGGATCGAGTCATTAGCATATGTGTCACTAATCTTAC
AATTTGTTCATTTTCCATGAACCTATATGCTTATATACATGTATATAACT
CCTATATACATATATAGCTGGGAGTCAAAGTCATGATTGGTGGCTTTTGT
ATTGTCAAAAATGTTGCGATGCATCAATGTATTGCATTGGTCTGTAGAGT
ACTTAAAACCGTCAGTATAATGGTTTCATCTAAAACATTTAAATCTAGCT
TGTCAGTTTAGCAATGTCTATTCTTGTATTCTTGCTCTTTTAGCCACACT
TTGTTTGTTCCTCTTTTGGTTTAGGCTTTTCGGCACTTTCGAATTTCAAA
AGTACTAAGGCCTTGTCTATTACTCTTGCTGCAGGACCATTGATTTACAA
GGGAATTTACCATCTCTTCTATCAATACAACCCTAAAGGTGTGGTTTGGG
GGAACATTGTGTGGGCTCATTCCACATCAACTGATCTTGTTAACTGGACC
CCACATGATGCTGCCATCTTCCCATCGCAGCCGTCCGATATCAACGGCTG
TTGGTCGGGTTCCGCCACCATCCTCCCGAGTGGCAAACCGGTCATTTTGT
ATACCGGAATCAACCCCCAAAACCAGCAGGTTCAGAATTTGGCCTTCCCC
AAGAACCTCTCAGACCCATTTCTTAGGGAGTGGGTCAAGGTCCCACAAAA
TCCCCTAATGGCACCCACCCAAGCTAACCATATCAACGCAAGCTCATTTA
GGGACCCCACAACTGCTTGGTTGGGCCCAGATAAGAGATGGAGAGTGATC
ATTGGAAGCAAGCAGAACCAAAGAGGATTAGCTATCCTATACAGGAGTAA
AGATTTCCTTCATTGGGTTAAGGCCAAACACCCCCTTCACTCAGCCAAGA
AAACTGGAATGTGGGAATGTCCAGATTTTTTCCCAGTTTCAATCCATGGC
CAGAATGGTCTTGACTCATCAGAAAATGGTCCTGCTGTCAAACATGTGCT
CAAGGCTAGCCTGGATAACACTAAACATGAGTACTACACAATTGGGACTT
ATAACATTGACAAGGATATATATATTCCGGATAAGGGTTCAGTGGAGAGT
GACTCAGGCTTGAGATATGATTATGGAAAGTTTTATGCTTCAAAAACTTT
CTTTGACAGTTCTAAGAATCGGAGGATATTGTGGGGTTGGATTAATGAAT
CGTCGAGCGTCGAGGGTGATATCAAGAAGGGATGGTCTGGACTTCAGGTA
ATGTTCTTTTGCCAAACAAATATTTATGCTGTCAAATTATGAATCTAAAT
CATACCAGATCCTCTTTGGATCTCCAAAAATTAAGTCTAAGGATCAAATG
ATCCAGGCATTTAAAATTTGATCCAACGGTTATAATTAATGTTATTTTCT
ATTTCTTTTTTTGCTATTTTTTTTTTATAAAAAGAAGACAACGGATGGCA
AATCACGATTATCTTTCTGGCCACAAGTTTAGCTTTCACACCAACAACGG
GTTTCGAACCCGAAACCTCCAAATTTTTTTTTAAAGAAGCTCTGGATTCG
TACTTTACCATTGGGCTAACCAGATCGTGGTCCTATTTCTTTGCTATTTG
GTATTTAAATAGTCTCCAATTAGCAGCTGGCTTTTGTGAACTAAATTGGT
CTTGTATTTGCATTGACTTTGACTCTCGCAGGCAATTCCAAGAACCCTAT
GGCTCGCCAAATCCGGGAAACAGTTGGTGCAATGGCCAGTACAAGAAATT
GAAAAGCTACGTGGAAAAACGGTCAAGTTGCCAAGCACTGTGCTTAAGGG
AGGATCGGTGCGTGAGGTAGTTGGTGTCACTGCAGCACAGGTGAATATTT
TATATTGCCACGTTTTTTAATTTACATTAACGATATTTTACTTTAAACTA
GATGAAAAATAATTCAAATACATATAGAAGGCACATCCGTTCTAGTTCTA
GCCGCCCACGTCTACTACCAACCGTTTTAATTTTGGTGTATTTTCCTTTT
GTTTTGTCAACCGTTTTGCAGGCAGATGTGGAGATTACATTCGGGATAAG
TGATTTTAAGAAAGCAGAAGTTCTTGACCCTAGTTGGACGGACCCCCAAC
TTTTGTGTGGCCAAAAAAGTGCCACAGTTAAAGGTAGTTTAGGACCATTT
GGGCTGTATGTTTTGGCTTCCAAGGACTTGAAAGAATACACAGCAGTGTT
CTATAGAATATTCAAAGCCAATAACAAATATGTGGTGCTCCTCTGCAGTG
ATCAAAGCCGGTCTCTCTCTCTCTCTCTCTCCCCCACCAAATGTCTAACC
AAACTTCAGATTGCTAACGTTTTCCCAAAAAAAAAAAAATAAAAAAACTT
CAGATTGCTAACTGCTTGTTTTTGTCTAACCATACTTCAAATTGTTAACT
ACTTGTTTTGTTTTGTTTTTTTTTTTTTGGTTATGGGTCGGTAGGTCTTC
CTTAAATAAGGATAATGATAAGACCACTTATGGAGCTTTTGTAAAGGTGG
ATCCTCTTCGTGAGAAGCTGTCGCTAAGAAATTTGGTAAGTTGCTTTAAA
CTAATATATATATATATATATATATATATATCATTTTTTTTATTGAAAAC
GATGTCTTTCCATATGATCATGGACCTCCATACGCATTGCATTCATGGAA
AAGTTTATTTGAATTTAAAAGTCTTCCCCATGAGAAATTTCAATCAAGCA
CATTGGAGAATCTAGAACCACCTCATGGGTAACAGTTCATAAGAAAAGGT
CAAATGCTACGATCAATCTTATCGTATCGTATCAGGGTGAAAAACTGATT
TCTGGTCATTGGCTTTGCAGATCTCATTGTGAGACTCATGTACTTGCATT
CATGATCAAAAATTACTCATACGCCTATATGCATACACTCTTTCTAAAAT
TAGAGAAATTTTTCAATATGACCGTCACATAGGATGATACATCACGTGTC
GTTATATAAATTGTGGGATATATGTGTTAAAAAGTTAATAATTTAGAAAA
TAAAATTTCTCATCACTTACATAAAAACACGTGGTGTACCACTCGTGTTC
CCGTCACAACTAAAAATTTCTCCTAAAATTGGACTAGTATACATGCAAAA
TGGGGATTCTAGCTACTTTGGGCAAGTATGCATGCGCCACAATCTTTGAC
ATGCATGACTCATTCGTTGCACATTTTACACTTGTAGATATGCCAATAGA
CCAGCTTTATACCATCTATGGTTCCTTCTTTTTGGATATGGATGCCTATA
CCTTTTCACTTCATCCTTTTCTTTTTACCCATTTCATGATAAGAAACATT
TGACCTAACGTACTTGGAATTTTTCCTCCTTTTTCTGATCAGATTGATCA
CTCAATTGTGGAGAGCTTTGGTGGAGAAGGCAAGGCGTGCATAACAGCTA
GGGTTTATCCCACATTGGCCATTGACGATGATGCTCACTTGTATGCCTTC
AATTATGGAACAGAAGATGTAAAAATCACAGGGAGTGCATGGAGCTTGAA
AACAGCAAAAATCAATTGA

protein sequence of MDP0000561738

>MDP0000561738 ID=MDP0000561738; Name=MDP0000561738; organism=Malus x domestica; type=polypeptide; length=704bp
MKQSTNTSPFTALAVRTSAIKPWPVKRTAPHSPPRGHHHKHQPPYLISSQ
ISTRSRSPHLGRPPSSRQWNNFARRSPVNHDSRAKSPDSQPELREGGTSR
SDLGQRFNYRTRSSTEHRTPPFEALLEIGHAVLRLEASHHVYRSLQTSEL
TSSHQDTEPYRTGYHFQPPKNWINGFSALSNFKSTKALSITLAAGPLIYK
GIYHLFYQYNPKGVVWGNIVWAHSTSTDLVNWTPHDAAIFPSQPSDINGC
WSGSATILPSGKPVILYTGINPQNQQVQNLAFPKNLSDPFLREWVKVPQN
PLMAPTQANHINASSFRDPTTAWLGPDKRWRVIIGSKQNQRGLAILYRSK
DFLHWVKAKHPLHSAKKTGMWECPDFFPVSIHGQNGLDSSENGPAVKHVL
KASLDNTKHEYYTIGTYNIDKDIYIPDKGSVESDSGLRYDYGKFYASKTF
FDSSKNRRILWGWINESSSVEGDIKKGWSGLQAIPRTLWLAKSGKQLVQW
PVQEIEKLRGKTVKLPSTVLKGGSVREVVGVTAAQADVEITFGISDFKKA
EVLDPSWTDPQLLCGQKSATVKGSLGPFGLYVLASKDLKEYTAVFYRIFK
ANNKYVVLLCSDQSRSSLNKDNDKTTYGAFVKVDPLREKLSLRNLIDHSI
VESFGGEGKACITARVYPTLAIDDDAHLYAFNYGTEDVKITGSAWSLKTA
KIN*

mRNA from alignment at chr13:29305782..29311850+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000561738 ID=MDP0000561738; Name=MDP0000561738; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr13:29305782..29311850+ (Malus x domestica

mRNA from alignment at MDC009168.711:11396..17464+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000561738 ID=MDP0000561738; Name=MDP0000561738; organism=Malus x domestica; type=mRNA; length=6069bp; location=Sequence derived from: MDC009168.711:11396..17464+ (Malus x domestica
ATGAAGCAGTCAACGAACACATCTCCTTTCACCGCCTTAGCAGTGAGGAC
TTCTGCAATCAAGGTATACTGAAACCCTAATAGAGCACCTTCGACATCCT
TTCTCTCAATACACACGCCTCCCAGTTCTTTCTCAGACAGGATGAGGTTG
ATCCCAAATCGTGTCCCCAACTCCTCTAAGTCCTCATTCGGACTTCCTCC
AGCCATGGCCAGTTAAAAGAACCGCACCCCACTCACCCCCCAGAGGCCAC
CACCACAAGCACCAGCCACCGTACCTTATCTCCTCTCAGATCTCCACCAG
ATCCAGATCTCCGCACCTGGGCAGGCCGCCCTCGAGCCGCCAGTGGAACA
ACTTTGCTCGCCGTTCCCCAGTCAATCACGACAGCCGAGCCAAGTCCCCG
GATTCGCAACCAGAGCTTCGAGAAGGAGGGACTAGCCGGTCAGATCTCGG
ACAACGATTCAACTACAGGACGCGCTCGTCGACGGAGCACCGCACTCCTC
CTTTCGAGGCACTCTTGGAGATAGGTTATTGAGGTAGGGAATTTTGGAAC
TGATTATTTTATATAAATCTGAGAAAACTCTGCCAAGCGTATAAGTTAAT
TACCAATTTGTTTTTAGTCGGGCACGAAGTTTTAGACCAGCATCTTGAGT
GATGTACAAGGGATAGAACAAGTTGAAGTTAATGAATGATTATGTTATGC
ATGGTTGACTGTTTTTTAATATTAAGCTAGAAGCTATATAGGGGACATGA
ACTGAAAGCACTTGCAAAATCGACTGGGTCGTCTCAATGTGTTAAAATGC
GTTCTTTTTTTGGGAGAACAAAAAAAAATAAAAAAAAATAAAGCGTTCTT
TAGATCTTCATCATTTGGCACTTCTATATATTTATAAGACCTCGAATGCA
TGAGTACATGCTTTTAATCACGTGAATTATAATTTACTCTTTTATCTTGT
CATCTTTTGTTTGTTTAACATTATTCTTGATTTGATTACCAAAAAGAAAA
ATGGGAAGTTCAAATTTGTTTTTCATAGTGCCATAAATAGTAGTTTACAG
TATTTTTTCATGGTTCGTACTACTGAGTAGGCCTGTCATTTTGGACCAAA
CCCGTTAACCCGATCCGACCCAACCCGTTAATATTTGTATTTGGATGGAT
GCTTAACGGGTCGAGTCGGGTCGCTAACGGGTGAACCCGTTAACAACCCG
TTAAATAACGGGTCACTTTGGGTCAACCCGTTAGACCCATTGGGACCCGT
TAACACCCGTTAGCACCCGTTAGTTGAGGATATTTTAGTAATTTTAGTAA
AATCTTAATAACAAAAAATAAACTTTATGCAAAAAAAAATAATAATAATA
ATTGTTAACGGGTGAAACGGGTGACCCGTTAGCTTAACGGGTCGGGTTCG
GGTGATCCGTTAACTTAACGGGTCGGGTTGAATCCGACCCAAACCCAATA
AACCCGACTCGTTTACAGGTCTACCACTGAGTGATTCTAAAAATTATTAG
CAGCTTGATTTTGCATATAGAGATCTCATATTTGTTTGCAACCATTAAAT
TTTGCATATAAGACATAATATTGTAGCCGAATAACTTTTGAAGATTATTA
AACAAAAAATGAACACGCAAGTATAATTGTTTGGTGTAGAGAAAACCCTT
TTCTAATAGAGGTGTGATATCCACATACTCATTTTTACTTTTCTCACACC
TTTTTTATTTTCGGCCGTAAGATTGAATGAATTGAAGAAGATTAACGAAT
AGAAATTAATAAGAAGTATGTGAGAAGTAAAAAATGGTGTATGGATAACA
TATCCCTTTCTAATACCATCTAACCAGAATGGATAAAAAGAAAGAAAGAA
AATGCAACCCTTTACTTTTGAATTTTTTATTTGAAGAGATCAACTAGGCT
GCTAATTTCTTGTCCTAAAGTTTACTTTTCCTCCTTCAGATCTTATGATG
AGACATCACTCTGCAATGACTTTTTGTTCTTTATCTCACATCTAACCATC
CACCCTTAGCCTTGACTACTCCTATAAATACACCGGAGAGTGTTCCCTTA
TTTTCTCATCCTCACAAACACAAAGCCACCATGTCTGTCTCCTCTCTCTT
TCTCTACTGCTTTCTCTGTCTTTGGCTAGGCCATGCTGTTCTTCGGCTTG
AAGCTTCCCACCATGTTTACAGAAGCCTTCAAACTTCCGAGCTAACTTCC
TCACATCAAGATACTGAACCCTACAGAACTGGTTATCATTTCCAACCTCC
CAAGAACTGGATCAATGGTATATTTTTATATCCCCTTTAATTTTCTTCAT
TAATTTATTCTAGTTTTTGTTCATATATTTTCATTCTTTTTCTATCACCC
GTCATTTTTATTGTTTATAACTCTAACATTTGTTTTCTTGCTTCTCGTTT
TTGACATTGACTTGTTCTAATTGTGGAATGGACAAATCGGCTTGTTTGGT
TGCACAGATCCTAATGGTTAGTTTGTCTCTCCTATTGTTCTATTTTCTTC
AAAAAATATTTTGTGCAATTAGTACTCTTCTCTTACATTTCTGGGTTTAG
TGTATGGGCTTTCAGGATCGAGTCATTAGCATATGTGTCACTAATCTTAC
AATTTGTTCATTTTCCATGAACCTATATGCTTATATACATGTATATAACT
CCTATATACATATATAGCTGGGAGTCAAAGTCATGATTGGTGGCTTTTGT
ATTGTCAAAAATGTTGCGATGCATCAATGTATTGCATTGGTCTGTAGAGT
ACTTAAAACCGTCAGTATAATGGTTTCATCTAAAACATTTAAATCTAGCT
TGTCAGTTTAGCAATGTCTATTCTTGTATTCTTGCTCTTTTAGCCACACT
TTGTTTGTTCCTCTTTTGGTTTAGGCTTTTCGGCACTTTCGAATTTCAAA
AGTACTAAGGCCTTGTCTATTACTCTTGCTGCAGGACCATTGATTTACAA
GGGAATTTACCATCTCTTCTATCAATACAACCCTAAAGGTGTGGTTTGGG
GGAACATTGTGTGGGCTCATTCCACATCAACTGATCTTGTTAACTGGACC
CCACATGATGCTGCCATCTTCCCATCGCAGCCGTCCGATATCAACGGCTG
TTGGTCGGGTTCCGCCACCATCCTCCCGAGTGGCAAACCGGTCATTTTGT
ATACCGGAATCAACCCCCAAAACCAGCAGGTTCAGAATTTGGCCTTCCCC
AAGAACCTCTCAGACCCATTTCTTAGGGAGTGGGTCAAGGTCCCACAAAA
TCCCCTAATGGCACCCACCCAAGCTAACCATATCAACGCAAGCTCATTTA
GGGACCCCACAACTGCTTGGTTGGGCCCAGATAAGAGATGGAGAGTGATC
ATTGGAAGCAAGCAGAACCAAAGAGGATTAGCTATCCTATACAGGAGTAA
AGATTTCCTTCATTGGGTTAAGGCCAAACACCCCCTTCACTCAGCCAAGA
AAACTGGAATGTGGGAATGTCCAGATTTTTTCCCAGTTTCAATCCATGGC
CAGAATGGTCTTGACTCATCAGAAAATGGTCCTGCTGTCAAACATGTGCT
CAAGGCTAGCCTGGATAACACTAAACATGAGTACTACACAATTGGGACTT
ATAACATTGACAAGGATATATATATTCCGGATAAGGGTTCAGTGGAGAGT
GACTCAGGCTTGAGATATGATTATGGAAAGTTTTATGCTTCAAAAACTTT
CTTTGACAGTTCTAAGAATCGGAGGATATTGTGGGGTTGGATTAATGAAT
CGTCGAGCGTCGAGGGTGATATCAAGAAGGGATGGTCTGGACTTCAGGTA
ATGTTCTTTTGCCAAACAAATATTTATGCTGTCAAATTATGAATCTAAAT
CATACCAGATCCTCTTTGGATCTCCAAAAATTAAGTCTAAGGATCAAATG
ATCCAGGCATTTAAAATTTGATCCAACGGTTATAATTAATGTTATTTTCT
ATTTCTTTTTTTGCTATTTTTTTTTTATAAAAAGAAGACAACGGATGGCA
AATCACGATTATCTTTCTGGCCACAAGTTTAGCTTTCACACCAACAACGG
GTTTCGAACCCGAAACCTCCAAATTTTTTTTTAAAGAAGCTCTGGATTCG
TACTTTACCATTGGGCTAACCAGATCGTGGTCCTATTTCTTTGCTATTTG
GTATTTAAATAGTCTCCAATTAGCAGCTGGCTTTTGTGAACTAAATTGGT
CTTGTATTTGCATTGACTTTGACTCTCGCAGGCAATTCCAAGAACCCTAT
GGCTCGCCAAATCCGGGAAACAGTTGGTGCAATGGCCAGTACAAGAAATT
GAAAAGCTACGTGGAAAAACGGTCAAGTTGCCAAGCACTGTGCTTAAGGG
AGGATCGGTGCGTGAGGTAGTTGGTGTCACTGCAGCACAGGTGAATATTT
TATATTGCCACGTTTTTTAATTTACATTAACGATATTTTACTTTAAACTA
GATGAAAAATAATTCAAATACATATAGAAGGCACATCCGTTCTAGTTCTA
GCCGCCCACGTCTACTACCAACCGTTTTAATTTTGGTGTATTTTCCTTTT
GTTTTGTCAACCGTTTTGCAGGCAGATGTGGAGATTACATTCGGGATAAG
TGATTTTAAGAAAGCAGAAGTTCTTGACCCTAGTTGGACGGACCCCCAAC
TTTTGTGTGGCCAAAAAAGTGCCACAGTTAAAGGTAGTTTAGGACCATTT
GGGCTGTATGTTTTGGCTTCCAAGGACTTGAAAGAATACACAGCAGTGTT
CTATAGAATATTCAAAGCCAATAACAAATATGTGGTGCTCCTCTGCAGTG
ATCAAAGCCGGTCTCTCTCTCTCTCTCTCTCCCCCACCAAATGTCTAACC
AAACTTCAGATTGCTAACGTTTTCCCAAAAAAAAAAAAATAAAAAAACTT
CAGATTGCTAACTGCTTGTTTTTGTCTAACCATACTTCAAATTGTTAACT
ACTTGTTTTGTTTTGTTTTTTTTTTTTTGGTTATGGGTCGGTAGGTCTTC
CTTAAATAAGGATAATGATAAGACCACTTATGGAGCTTTTGTAAAGGTGG
ATCCTCTTCGTGAGAAGCTGTCGCTAAGAAATTTGGTAAGTTGCTTTAAA
CTAATATATATATATATATATATATATATATCATTTTTTTTATTGAAAAC
GATGTCTTTCCATATGATCATGGACCTCCATACGCATTGCATTCATGGAA
AAGTTTATTTGAATTTAAAAGTCTTCCCCATGAGAAATTTCAATCAAGCA
CATTGGAGAATCTAGAACCACCTCATGGGTAACAGTTCATAAGAAAAGGT
CAAATGCTACGATCAATCTTATCGTATCGTATCAGGGTGAAAAACTGATT
TCTGGTCATTGGCTTTGCAGATCTCATTGTGAGACTCATGTACTTGCATT
CATGATCAAAAATTACTCATACGCCTATATGCATACACTCTTTCTAAAAT
TAGAGAAATTTTTCAATATGACCGTCACATAGGATGATACATCACGTGTC
GTTATATAAATTGTGGGATATATGTGTTAAAAAGTTAATAATTTAGAAAA
TAAAATTTCTCATCACTTACATAAAAACACGTGGTGTACCACTCGTGTTC
CCGTCACAACTAAAAATTTCTCCTAAAATTGGACTAGTATACATGCAAAA
TGGGGATTCTAGCTACTTTGGGCAAGTATGCATGCGCCACAATCTTTGAC
ATGCATGACTCATTCGTTGCACATTTTACACTTGTAGATATGCCAATAGA
CCAGCTTTATACCATCTATGGTTCCTTCTTTTTGGATATGGATGCCTATA
CCTTTTCACTTCATCCTTTTCTTTTTACCCATTTCATGATAAGAAACATT
TGACCTAACGTACTTGGAATTTTTCCTCCTTTTTCTGATCAGATTGATCA
CTCAATTGTGGAGAGCTTTGGTGGAGAAGGCAAGGCGTGCATAACAGCTA
GGGTTTATCCCACATTGGCCATTGACGATGATGCTCACTTGTATGCCTTC
AATTATGGAACAGAAGATGTAAAAATCACAGGGAGTGCATGGAGCTTGAA
AACAGCAAAAATCAATTGA

Coding sequence (CDS) from alignment at MDC009168.711:11396..17464+

>MDP0000561738 ID=MDP0000561738; Name=MDP0000561738; organism=Malus x domestica; type=CDS; length=2112bp; location=Sequence derived from: MDC009168.711:11396..17464+ (Malus x domestica
ATGAAGCAGTCAACGAACACATCTCCTTTCACCGCCTTAGCAGTGAGGAC
TTCTGCAATCAAGCCATGGCCAGTTAAAAGAACCGCACCCCACTCACCCC
CCAGAGGCCACCACCACAAGCACCAGCCACCGTACCTTATCTCCTCTCAG
ATCTCCACCAGATCCAGATCTCCGCACCTGGGCAGGCCGCCCTCGAGCCG
CCAGTGGAACAACTTTGCTCGCCGTTCCCCAGTCAATCACGACAGCCGAG
CCAAGTCCCCGGATTCGCAACCAGAGCTTCGAGAAGGAGGGACTAGCCGG
TCAGATCTCGGACAACGATTCAACTACAGGACGCGCTCGTCGACGGAGCA
CCGCACTCCTCCTTTCGAGGCACTCTTGGAGATAGGCCATGCTGTTCTTC
GGCTTGAAGCTTCCCACCATGTTTACAGAAGCCTTCAAACTTCCGAGCTA
ACTTCCTCACATCAAGATACTGAACCCTACAGAACTGGTTATCATTTCCA
ACCTCCCAAGAACTGGATCAATGGCTTTTCGGCACTTTCGAATTTCAAAA
GTACTAAGGCCTTGTCTATTACTCTTGCTGCAGGACCATTGATTTACAAG
GGAATTTACCATCTCTTCTATCAATACAACCCTAAAGGTGTGGTTTGGGG
GAACATTGTGTGGGCTCATTCCACATCAACTGATCTTGTTAACTGGACCC
CACATGATGCTGCCATCTTCCCATCGCAGCCGTCCGATATCAACGGCTGT
TGGTCGGGTTCCGCCACCATCCTCCCGAGTGGCAAACCGGTCATTTTGTA
TACCGGAATCAACCCCCAAAACCAGCAGGTTCAGAATTTGGCCTTCCCCA
AGAACCTCTCAGACCCATTTCTTAGGGAGTGGGTCAAGGTCCCACAAAAT
CCCCTAATGGCACCCACCCAAGCTAACCATATCAACGCAAGCTCATTTAG
GGACCCCACAACTGCTTGGTTGGGCCCAGATAAGAGATGGAGAGTGATCA
TTGGAAGCAAGCAGAACCAAAGAGGATTAGCTATCCTATACAGGAGTAAA
GATTTCCTTCATTGGGTTAAGGCCAAACACCCCCTTCACTCAGCCAAGAA
AACTGGAATGTGGGAATGTCCAGATTTTTTCCCAGTTTCAATCCATGGCC
AGAATGGTCTTGACTCATCAGAAAATGGTCCTGCTGTCAAACATGTGCTC
AAGGCTAGCCTGGATAACACTAAACATGAGTACTACACAATTGGGACTTA
TAACATTGACAAGGATATATATATTCCGGATAAGGGTTCAGTGGAGAGTG
ACTCAGGCTTGAGATATGATTATGGAAAGTTTTATGCTTCAAAAACTTTC
TTTGACAGTTCTAAGAATCGGAGGATATTGTGGGGTTGGATTAATGAATC
GTCGAGCGTCGAGGGTGATATCAAGAAGGGATGGTCTGGACTTCAGGCAA
TTCCAAGAACCCTATGGCTCGCCAAATCCGGGAAACAGTTGGTGCAATGG
CCAGTACAAGAAATTGAAAAGCTACGTGGAAAAACGGTCAAGTTGCCAAG
CACTGTGCTTAAGGGAGGATCGGTGCGTGAGGTAGTTGGTGTCACTGCAG
CACAGGCAGATGTGGAGATTACATTCGGGATAAGTGATTTTAAGAAAGCA
GAAGTTCTTGACCCTAGTTGGACGGACCCCCAACTTTTGTGTGGCCAAAA
AAGTGCCACAGTTAAAGGTAGTTTAGGACCATTTGGGCTGTATGTTTTGG
CTTCCAAGGACTTGAAAGAATACACAGCAGTGTTCTATAGAATATTCAAA
GCCAATAACAAATATGTGGTGCTCCTCTGCAGTGATCAAAGCCGGTCTTC
CTTAAATAAGGATAATGATAAGACCACTTATGGAGCTTTTGTAAAGGTGG
ATCCTCTTCGTGAGAAGCTGTCGCTAAGAAATTTGATTGATCACTCAATT
GTGGAGAGCTTTGGTGGAGAAGGCAAGGCGTGCATAACAGCTAGGGTTTA
TCCCACATTGGCCATTGACGATGATGCTCACTTGTATGCCTTCAATTATG
GAACAGAAGATGTAAAAATCACAGGGAGTGCATGGAGCTTGAAAACAGCA
AAAATCAATTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001362	Glyco_hydro_32
IPR008985	Concanavalin A-like lectin/glucanase
IPR013148	Glyco_hydro_32_N
IPR013189	Glyco_hydro_32_C
IPR023296	Glyco_hydro_beta-prop_sf

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process