MDP0000580739, MDP0000580739 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000580739
Unique Name	MDP0000580739
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	1870

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr5	chromosome	chr5:22273061..22274930 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC016957.218	contig	MDC016957.218:124..1993 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0	2012-07-23
BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000580739_exon_1	MDP0000580739_exon_1	Malus x domestica	CDS
MDP0000580739_exon_2	MDP0000580739_exon_2	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000580739	MDP0000580739	Malus x domestica	polypeptide

Homology

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|317106712|dbj|BAJ53211.1| (JHL23C09.7 [Jatropha curcas])

HSP 1 Score: 268.085 bits (684), Expect = 3.787e-69
Identity = 189/608 (31.09%), Postives = 305/608 (50.16%), Query Frame = 1

Query:    4 ASTSSRSNLGTIPDIVNEEQKFEF-QTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQ--NSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVD----XGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQT-------SPTASDF--DAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE--KHYEXENQVKVIT----KENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPVIEQNNFTNQSLHIIGKQLDKIETKVDN-------LSXKPLSKEIPLTSFRESPSLKTSTSIKIEQMLHKLE 1740
            +++S+RS     P+I     + E    D S    EW IPK+  + IYK    F  FKT++ +KT E+ + LSK  E   L + + +  H+   + YIHIGL+Q+  KPLTR GLNTSIL  +RDARF +F DS+LG VE+SL  GPI F+ +PD+T+SL+D ++L+++ L IKT  YK+ +G+ P+ALIY+I+YK   +    +   +     T  +QTD    N  IP+TI+W +I LP++W L     P A +     VNL  +EQ+ DG V + F+R             S +      S S+ TD   +    I S+   K K  +      + V  +   +D+ N K++ ++ +  + Q  Y+       ++         SPTAS    +   ++ +L VL++ +      K L ++I   +N+ +       YT E   E+   + D+   N+ EI FFD+ +  K  +    +  IT    +  W+  D+T + S  PP+    +   + ++  +P+K+  +    K VIEQNNF+N SL  +  QL +IE  +++       +  K   K      ++ S S K     K++  L KLE
Sbjct:    8 SASSNRSEDSDNPEIKRVINRNELILQDFSKAIDEWEIPKVDKEQIYKVS-KFNLFKTDYVIKTEERDFQLSKPFERITLLSSKTLQHHKSKKYKYIHIGLIQVGIKPLTREGLNTSILAVVRDARFLNFQDSLLGSVETSLSEGPISFEVYPDMTVSLNDLNILESIVLEIKTHNYKMKQGSIPIALIYKIHYKAMNSAFGTKYKLQPKIGETRFLQTDLTKTNTVIPKTIQWKDITLPNEWILEGVVPPPAPEPVKPNVNLQKIEQFEDGKVTLKFNR-------------SQSMRYTGSSSSVTTDENDKPSSSIPSVIYAKYKEPEHKPIIQTLVKPRYSTSDIPN-KMKGVDYSHSIPQAVYNPVDNYVNQQSNLVNSAPESPTASAITENVSDINRELNVLSKDD----IEKSLIKEISKTKNLIKMKKILKTYTFE---ELKYEYLDYKICNQTEIKFFDWYKLIKENKTAKSLNPITIRDKRPEWIVNDQT-IKSDFPPKTISKLKYQDNEIICAPYKIVHDNDINKKVIEQNNFSNASLICLNSQLKRIEHMLEDKPLVSETIKGKETVKTHMFKPYQISQSSKQEFVNKLKDQLSKLE 592

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|24461860|gb|AAN62347.1|AF506028_14 (CTV.20 [Citrus trifoliata])

HSP 1 Score: 234.958 bits (598), Expect = 3.553e-59
Identity = 158/458 (34.50%), Postives = 244/458 (53.28%), Query Frame = 1

Query:  319 KPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSL---VNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTY----HXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKVITKEN-----------W-VKEDKTVVSSSHPPQETILISTAN--TQVPASPFKLPK---EXAGVKPVIEQNNFTNQSLHIIGKQLDKIETK 1620
            KPLT+ GL+TSIL  LRD RF  F DS+L  +ESSLC GPI FDC+P++TISL D ++LK++ L IKT  YK+++G+ P+ALI++I YK   +  + Q   +S +D TLL+QTD   AN  IP+ I+W +INLP +W ++  + P  I   L     L NV QY DG VK+ F           RS+ S  SN+ S S     +R+      + +L  +  KS    S+       +D+ +  + S++    V  P Y    H  S   ++E + PT+  F A  V   ++ +  +E F  D+  L  D  +  N  ++  F  ++  + K EI + + +F+  +++ I FFD+ E  Y  EN +    KE+           W + +    + S HPP  ++ I       Q+ ASP+K+PK     + +  +I+QNNF N +L+ IGKQL +IE +
Sbjct:  103 KPLTKEGLDTSILAVLRDGRFISFDDSLLSSIESSLCKGPIPFDCYPNITISLKDKNVLKSMILQIKTHNYKMIKGSIPVALIFKISYKAMVSAFSTQHRFQSKRDETLLLQTDLSRANTVIPKPIQWKDINLPEEW-ILEGAAPPTIPKQLEPNTELQNVTQYSDGKVKLLF----------RRSMSSRFSNKESCSSIPTLERKFTKIPSVINLPYQSTKSQPRFST-------SDIPSSSIHSVDYTTNVPHPIYTSSQHVQS-QEEKEPSLPTSPTFSA--VTENVINIIEKE-FELDKTLLHNDFYSDLNKEKKIWFFKQFLNQRK-EIQQIYYEFVNFHKVHILFFDWFE-IYSSENNITYPFKESNPITIRKKIPEWKLSDSDKTIESEHPPLRSLTIDHGEPPIQIRASPYKIPKPNDSDSNLSSIIQQNNFCNTNLNTIGKQLTRIENQ 536

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|147857929|emb|CAN80385.1| (hypothetical protein VITISV_039771 [Vitis vinifera])

HSP 1 Score: 230.335 bits (586), Expect = 8.750e-58
Identity = 169/595 (28.40%), Postives = 285/595 (47.90%), Query Frame = 1

Query:   16 SRSNLGTIPDIVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFF---FDFVEKHYEXENQVKVITKEN-----WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQLDKIETKVDNL----------SXKPLSKEIPLT-SFRESPSLKTSTSIKIEQ 1722
            SR +  +  D+VN  +    +  + LD  +W +PK+S++ IYKK      F T + +KT E   +L +D++  +L     I  H++DG+N+IH G++Q+AAKPLTR GLNTSI++CLRD R   + DSI+G+V++ L + P++F C+P+ T+ + D  +L  + L+IKT G+K+  G  P+++I R  YK   T++   AL  SPK  T    +D  + ++  IP+ I W ++  P +W   N    +A ++    ++ + QY DG  ++ F    R S  S+  +  +  +R S S S+P  R  R+ E  +S   + +K ++   S               +S    + V+ PTY          Q   T S  D              E F  ++  L +D  +  N  R + F S      +    + +  +++  +  I F   F+  ++    +   K I   +     W   D  V+ S HPP+  I  +   T V ASPFK   E  G      ++ +IEQ N+TN  L  +G Q++++E  ++              KPL K   L+  F+E+P +  +   +I Q
Sbjct:    2 SRRSNDSQDDVVNSXEINYPKIXNELD--DWKLPKVSNQEIYKK--GTFKFFTYYTIKTSEMXVSLEQDNQVIRLLDNRSIEKHKRDGNNFIHFGMIQVAAKPLTRLGLNTSIVMCLRDNRHLXYRDSIIGVVQAGLNDDPVYFQCYPNFTVRIRDADILDXVILHIKTHGFKIKPGNSPVSIITRFAYKSMNTSIGSGALCTSPKGETTYFHSDMLDKSBFIIPKKILWKDVEFPENWHFSNAVPAIAQRSE--RIEQIVQYPDGGGELVFSNSFRHS--SSPRVSVYEPSRAS-SSSIPV-RTTREXEGSSSGNPKNIKLIEENXSTQ-------------ESQXDESPVMSPTY---------SQMINTISLSD--------------EDFEINKDFLRKDFYSEVNKQRNDWFFSTVPKVIRTIYQEEFYAYLRQEKKNIKFWIWFELFKQEEYPDYPCKCINNTSTKAKIWKTSDNIVIESIHPPKAKIEKNINGTIVTASPFKTKPEDKGTTSATDIRRIIEQINYTNMFLITLGNQVNRVEEIIETQDHLKKSFVKNDNKPLFKNFELSRKFQENPQIDQAFIDRISQ 550

HSP 2 Score: 156.762 bits (395), Expect = 1.230e-35
Identity = 73/209 (34.93%), Postives = 126/209 (60.29%), Query Frame = 1

Query:  184 VKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFD 807
            +KT E   +L +D +  +L     I  H++DG+N+IH G++ +A KPLTR G+NTSI++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT G+K+  G  P+++I R  YK    ++   AL  SPK  T    +D    ++  IP+ I  +++  P +W   N    +A ++   +++ + QY D
Sbjct: 1392 IKTSEMTVSLEQDDQVIRLLDNRSIEKHKRDGYNFIHFGMIXVAXKPLTRLGVNTSIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHGFKIKPGNSPVSIITRFAYKSMNXSVESXALCTSPKGETTYFHSDMLXKSDFIIPKKILXNDVEFPENWHFANAIPAIAQRSK--SIEQIVQYPD 1598

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|147846463|emb|CAN81666.1| (hypothetical protein VITISV_023751 [Vitis vinifera])

HSP 1 Score: 220.32 bits (560), Expect = 9.055e-55
Identity = 150/520 (28.85%), Postives = 254/520 (48.85%), Query Frame = 1

Query:  118 KISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLL--VLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE-------KHYEXENQVKVITKEN-WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQLDKIETKVD 1626
            K+S++ IYKK      F T + +KT E + +L +D +  +L     I  H++D +N+IH G++Q+A KPLTR GLNTSI++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT  +K+  G  P+++I R  YK   T++   AL  SPK  T     D  + ++  IP+ I W ++  P +W   N    +A ++   +++ + QY DG  ++ F    R S  S+  +  +  +R S S S+P  R  R++E  NS  N K                    N KL  + ++  V +P Y   +   +E Q           P + Q++  +    E F  ++  L +D  +  N  R + F +      +    K +  ++   +  I F+ + E         Y  +      TK   W   D  V+ S HPP+  I  +   T + ASPFK   E  G      ++ ++EQ N+TN  L  +G Q++K+E  ++
Sbjct:  413 KVSNQEIYKK--GTFKFFTNYTIKTSEMSVSLEQDDQVIRLLDNRSIEKHKRDDYNFIHFGMIQVAVKPLTRLGLNTSIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHDFKIKPGNSPVSIITRFAYKSMNTSVGSGALCTSPKGETTYFHLDMLDKSDFIIPKKILWKDVEFPENWHFANAVPAIAQRSE--SIEQIVQYPDGGGELIFSNSFRHS--SSPRVSVYEPSRAS-SSSIPV-RTTREEEGSNS-GNPK--------------------NIKLTGVRSHTNVARPFYTEENESTQESQQD---ESLVMSPTYSQMINTISLSDEDFEINKDLLRKDFYSEVNKQRNDWFFNTVPKVIRTIYQKEFYAYLGQEKKNIKFWIWFELFKQEDYPDYPCKRINNTSTKAKIWKTSDNIVIESIHPPEAKIEKNINGTIITASPFKTKPEDKGTVSATDIRRIMEQINYTNMFLITLGNQVNKVEEIIE 900

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|147820415|emb|CAN60041.1| (hypothetical protein VITISV_008274 [Vitis vinifera])

HSP 1 Score: 218.779 bits (556), Expect = 2.635e-54
Identity = 161/616 (26.14%), Postives = 293/616 (47.56%), Query Frame = 1

Query:   46 IVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTY--HXPSIPPKEEQTSPTASDFDAEPVHHQLL--VLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE-------KHYEXENQVKVITKEN-WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQLDKIETKVDNL----------SXKPLSKEIPLT-SFRESPSLKTSTSIKIEQMLHKLEKD---KSVRIQKMKVLIPSFK 1794
            +VN E+    +  + LD  +W +P +S++ IYKK      F T++ +KT E + +L +D +  +L     I  H++DG+N+IH G++Q+AAKPLT+ GLNTSI++CLRD R   + +SI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT G+K+      +++I R  YK   T++ F+AL  SPK  T    +D  + ++  IP+ I W ++  P +W  +N    +A ++   +++ + QY DG  ++     +    D   +L+    N        P + Q    +L                          L   KL  + ++  V +P Y     S    +++ SP  S     P + Q++  +    E F  ++  L  D  +  N  R + F S      +    + +  +++  +  I F+ + E        +Y  ++     TK   W   D  V+ S H P+  I  +   T V ASPFK   +  G      ++ ++EQ N+TN  L  +G Q++++E  ++              KPL K   L+  F+E+P +  +   +I Q  H  +++   K++ I+ ++  I  +K
Sbjct:  483 VVNSEEINYPKIQNDLD--DWKLPNVSNQEIYKK--GTFKFFTDYTIKTFEMSVSLEQDDQVIRLLDNRSIEKHKRDGYNFIHFGMIQVAAKPLTKLGLNTSIVMCLRDNRHLXYRNSIIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHGFKIKPXNXXVSIITRFAYKSMNTSVGFRALCTSPKGETTYFHSDMLDKSDFIIPKKILWKDVEFPENWHFVNVVPAIAQRSE--SIEQIVQYPDGGGEL----VSPTLSDIPAALEFLFMN--------PLELQALPSQL------------------------EXLXKKKLTDVRSHTNVARPFYTEENESTQEFQQEESPVMS-----PTYSQMINTISLSDEDFEINKDLLRXDFYSEVNKQRNDWFFSTVPKVIRTIYQEEFYAYLRQEKKNIKFWIWFELFKQEEYPNYPCKHINNTSTKAKIWKTSDNIVIESIHXPKAKIEKNINGTIVTASPFKTKPKDKGTASAIDIRRIMEQINYTNMFLITLGNQVNRVEEIIETQDHLKKSFVKNDNKPLFKPFELSKKFQENPQIDQAFIDRISQKDHSDKQEIILKTLTIKDLQEEIGQYK 1051

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|147833383|emb|CAN66235.1| (hypothetical protein VITISV_023373 [Vitis vinifera])

HSP 1 Score: 218.394 bits (555), Expect = 3.441e-54
Identity = 172/569 (30.23%), Postives = 275/569 (48.33%), Query Frame = 1

Query:   46 IVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKVITKEN-WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQ--LDKIETKVDNLSXKPLSKEIPLT-SFRESPSLKTSTSIKIEQ 1722
            +VN E+    +  + LD  +W +PK+S++ IYKK      F T++ +KT E   +L +D +  +L     +  H+KDG+N+IH G++Q+AAKPLTR GLNT+I++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ L D  +L ++ L+IKT G+K+  G  P+++I R  YK   T++   AL  SPKD +  I          IP+ I W +++ P +W   N    +A ++   +++ + QY DG  ++ F +  R S  S+  +  +  +R S S S+P  R  R++E  +S   + +K     ++++  +          +  E N  +++                    DF +E V+ Q     R + F     K+ R I   E           Y  +EK  I K W  F    + E          Y  +      TK   W   D   + S HPP+  I  +   T V ASPFK   E  G      +  ++EQ N+TN  L  +G Q  L K   K DN   KPL K   L+  F+E+P +  +   KI Q
Sbjct:  560 VVNSEEINYPKIQNDLD--DWKLPKVSNQEIYKK--GTFKFFTDYTIKTSEMTVSLEQDDQVIRLLDNRSVEKHKKDGYNFIHFGMIQVAAKPLTRLGLNTAIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGFKIKPGNSPVSIITRFAYKSMNTSVGSGALCTSPKDKSDFI----------IPKKILWKDVDFPENWHFANAVPAIAQRSE--SIEQIVQYPDGGGELVFSKSFRHS--SSPRVSVYEPSRAS-SSSIPV-RTTREEEGSSSGNPKNVKLTGMINTISLSD----------EDFEINKDLLR-------------------KDFYSE-VNKQ-----RNDWFFSTXPKVIRTIYQEEFY--------AYLRQEKKNI-KFWIWFELFKQXEY-------PXYPCKXINNTSTKXKIWKTSDNIXIESIHPPEAKIEKNINGTIVTASPFKTKPEDKGTASASDIXRIMEQINYTNMFLITLGNQDHLKKPFVKNDN---KPLFKPFELSKKFQENPQIDQAFIDKISQ 1054

[Close]

BLAST of MDP0000580739 vs. NCBI nr
Match: gi|242071789|ref|XP_002451171.1| (hypothetical protein SORBIDRAFT_05g025330 [Sorghum bicolor] >gi|241937014|gb|EES10159.1| hypothetical protein SORBIDRAFT_05g025330 [Sorghum bicolor])

HSP 1 Score: 216.468 bits (550), Expect = 1.308e-53
Identity = 162/559 (28.98%), Postives = 257/559 (45.97%), Query Frame = 1

Query:  223 HETCQLFTPEQINSHR-KDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE----KHYE-----------------XENQVKVITK--ENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPV--------IEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEI----PLTSFRESPSLKTSTSIKIEQML---HKLEKDKSVRIQKMKVLI 1782
            HET  L +  +IN  R K  ++Y+H GLVQ+A + LTR+GLN SIL CLRD R   F DS+LGMVE+SL NGP+ F+ FPD ++SLSDP++ KALTLN++TSG+ +  G++ +++ YRIYYK   T++   A   +PK  + L+Q +  N NI  P+ ++W EI LP  W L     P  ++ +   + ++ +  DG V++                 +F+S R +F  S P+                   S+D    +  Q                   +V  TY   S  P          + D +P       + R++ F  D++ L R+I   +N  ++  +        +L+I + W   M   +  IFFFD+ E    +H+E                    ++ +I K  ++W       V + HPP E I +      + A P K        +P+        +EQ N++N SLH +G+Q ++IE  + +   KP   E+    P +S  E P  +      + QM     KL K K++     + LI
Sbjct:    2 HETLHLLSEREINDIRAKPQYHYLHFGLVQVAIRSLTRKGLNVSILACLRDCRNKRFQDSLLGMVEASLSNGPVFFNTFPDFSVSLSDPNINKALTLNLQTSGFDLEPGSENISVTYRIYYKAM-TSLAPCAKQYTPKGLSTLLQANPRN-NIITPKALKWEEIRLPEKWTLTQAVEPQTLEQT--EIQSISETPDGDVEV-----------------AFSSKRKAFVQSRPS------------------VSIDNRPQMKPQ------------------NIVYATYEDNSYEPSISDFEINVIETD-DPELQTYCYIVREKEFQIDKELLRREIALPKNKAKKERYFKNVDQPFRLKIREVWHKEMIEQKKNIFFFDWYENSQIRHFEEFFKPGSKQKDKIEPESDNEKITMIKKVSKDWKTTSGKQVEAMHPPFEPIQLEAKGESIKACPLKNISRATYAEPIKVEHIGHLVEQQNYSNISLHALGQQTERIEVILTD-GTKPNKSEVKVNHPSSSHSEVPQTQIVIPPFVPQMASSNFKLGKQKAMESSVSEELI 501

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|242068045|ref|XP_002449299.1| (hypothetical protein SORBIDRAFT_05g007360 [Sorghum bicolor] >gi|241935142|gb|EES08287.1| hypothetical protein SORBIDRAFT_05g007360 [Sorghum bicolor])

HSP 1 Score: 216.468 bits (550), Expect = 1.308e-53
Identity = 160/550 (29.09%), Postives = 255/550 (46.36%), Query Frame = 1

Query:  223 HETCQLFTPEQINSHR-KDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE----KHYE-----------------XENQVKVITK--ENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPV--------IEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEI----PLTSFRESPSLKTSTSIKIEQM---LHKLEKDKSV 1755
            HET  L +  +IN  R K  ++Y+H GLVQ+A + LTR+GLN SIL CLRD R   F DS+LGMVE+SL NGP+ F+ FPD ++SLSDP++ KALT N++TSG+ +  G++ +++ YRIYYK   T++   A   +PK  + L+Q +  N NI  P+ ++W EI LP  W L     P  ++ +   + ++ +  DG V++                 +F+S R +F  S P+                   S+D    +  Q                   +V  TY   S  P        A + D +P       + R++ F  D++ L R+I   +N  ++  +        +L+I + W   M   +  IFFFD+ E    +H+E                    ++ +I K  ++W       V + HPP E I +      + A P K        +P+        +EQ N++N SLH +G+Q ++IE  + +   KP   E+    P +S  E P  +      + QM   + KL K K++
Sbjct:    2 HETLHLLSEREINDIRAKPQYHYLHFGLVQVAIRSLTRKGLNVSILACLRDCRNKRFQDSLLGMVEASLSNGPVFFNTFPDFSVSLSDPNINKALTQNLQTSGFDLEPGSENISVTYRIYYKAM-TSLAPCAKQYTPKGLSTLLQANPRN-NIITPKALKWEEIRLPEKWTLTQAVEPQTLEQT--EIQSISETPDGDVEV-----------------AFSSKRKAFVQSRPS------------------VSIDNRPQMKPQ------------------NIVYATYEDNSYEPSISDFEINAIEID-DPELQTYCYIVREKEFQIDKELLRREIALPKNKAKKERYFKNVDQPFRLKIREVWHKEMIEQKKNIFFFDWYENSQIRHFEEFFKPGSKQKDKIEPESDNEKITMIKKVSKDWKTTSGKQVEAVHPPFEPIQLEAKGESIKACPLKNISRATYAEPIKVEHIGHLVEQQNYSNISLHALGQQTERIEAILTD-GTKPNKSEVKVNLPSSSHSEVPQTQIVIPPFVPQMASSIFKLGKQKAM 492

[Close]

BLAST of MDP0000580739 vs. NCBI nr
Match: gi|242068605|ref|XP_002449579.1| (hypothetical protein SORBIDRAFT_05g019550 [Sorghum bicolor] >gi|241935422|gb|EES08567.1| hypothetical protein SORBIDRAFT_05g019550 [Sorghum bicolor])

HSP 1 Score: 215.312 bits (547), Expect = 2.913e-53
Identity = 161/550 (29.27%), Postives = 254/550 (46.18%), Query Frame = 1

Query:  223 HETCQLFTPEQINSHR-KDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE----KHYE-----------------XENQVKVITK--ENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPV--------IEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEI----PLTSFRESPSLKTSTSIKIEQML---HKLEKDKSV 1755
            HET  L +  +IN  R K  ++Y+H GLVQIA + LTR+GLN SIL CLRD R   F DS+LGMVE+SL NGP+ F+ FPD ++SLSDP++ KALTLN++TSG+ +  G++ +++ YRIYYK   T++   A   +PK  + L+Q +  N NI  P+ ++W EI LP  W L     P  ++ +   + ++ +  DG V++                 +F+S R +F  S P+                   S+D    +  Q                   +V  TY   S  P          + D +P       + R++ F  D++ L R+I   +N  ++  +        +L+I + W   M   +  IFFFD+ E    +H+E                    ++ +I K  ++W       V + HPP E I +      + A P K        +P+        +EQ N++N SLH +G+Q ++IE  + +   KP   E+    P +S  E P  +      + QM     KL K K++
Sbjct:    2 HETLHLLSEREINDIRAKPQYHYLHFGLVQIAIRSLTRKGLNVSILACLRDCRNKRFQDSLLGMVEASLSNGPVFFNTFPDFSVSLSDPNINKALTLNLQTSGFDLEPGSENISVTYRIYYKAM-TSLAPCAKQYTPKGLSTLLQANPRN-NIITPKALKWEEIRLPEKWTLTQAVEPQTLEQT--EVQSISETPDGDVEV-----------------AFSSKRKAFVQSRPS------------------VSIDNRPQMKPQ------------------NIVYATYEDNSYEPSISDFEINVIETD-DPELQTYCYIVREKEFQIDKELLRREIALPKNKAKKERYFKNVDQPFRLKIREVWHKEMIEQKKNIFFFDWYENSQIRHFEEFFKPGSKQKDKIEPESDNEKITMIKKVSKDWKTTSGKQVEAVHPPFEPIQLEAKGESIKACPLKNISRATYAEPIKVEHIGHLVEQQNYSNISLHALGQQTERIEAILTD-GTKPNKSEVKVNLPSSSHSEVPQTQIVIPPFVPQMASSNFKLGKQKAM 492

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BLAST of MDP0000580739 vs. NCBI nr
Match: gi|147864932|emb|CAN83629.1| (hypothetical protein VITISV_031958 [Vitis vinifera])

HSP 1 Score: 208.379 bits (529), Expect = 3.561e-51
Identity = 160/548 (29.20%), Postives = 262/548 (47.81%), Query Frame = 1

Query:   94 DFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPR--RNIFRSK---YTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKVITKENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQL--------------DKIETKVDNLSXKPLSKEI 1659
            D  +W + K+S+  IYKK      F T++ + T   + +L +D +  +L     I  H++DG+N+IH G++Q+AAKPLTR GLNTSI++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT G+K+  G  P+++I R  YK   T++   AL  SPK  T    +D    ++  IP+ I W ++  P +W   N     AI     +++ + QY DG  ++ F    R    S+  +  +  +R S S S+P  R  R++E               GSS    +      N KL  + ++  ++                + + SD D E ++  LL   R++   Y      R+      +P+  R I++ +   Y  +EK  I K W  F    + E  + D+  K     +    I    W   D  V+ S HPP+  I  +   T V  SPFK+  E  G      ++ ++EQ N+TN  L  +G Q+              DK E  ++ L+ K L +EI
Sbjct:  118 DLNDWKLXKVSNXEIYKK--GTFKFFTDYTIXTSXMSVSLEQDDQVIRLLDNRSIKKHKRDGYNFIHFGMIQVAAKPLTRLGLNTSIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRIRDVDILDSVVLHIKTHGFKIKPGNSPVSIITRFAYKSMNTSVGSGALCTSPKGETTYFHSDMLXKSDFIIPKKILWKDVEFPENWHFAN--AVPAIAQRFESIEQIVQYLDGGGELVFPNSFRHL--SSPRVSVYEPSRAS-SSSIPV-RTTREEE---------------GSSSGNPK------NIKLTGVRSHTNMI---------------NTISLSDEDFE-INKDLL---RKD--FYSEVNKQRNDWFFNTIPKVIRTIYQGEFYAYLRQEKKNI-KFWIWFELFKQEE--YPDYPGKRINNTSTKAKI----WKTSDNIVIESIHPPEAKIEKNINGTIVTTSPFKIKPEDKGTASATDIRRIMEQINYTNMFLITLGNQVNQRTSIQNPFEDHSDKQEIILNTLTIKDLQEEI 608

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BLAST of MDP0000580739 vs. ExPASy Swiss-Prot
Match: POLG_PVCV2 (Genome polyprotein OS=Petunia vein clearing virus (isolate Hohn) PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 9.086e-11
Identity = 68/285 (23.86%), Postives = 120/285 (42.11%), Query Frame = 1

Query:  121 ISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGH-NYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENAN---IKIPRTIRWSEI--NLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTS-------NRNSFSGSMPTDRQGRD 936
            + SK  + K++  AS   +H V         + + +   L  PE+  SH K     +IH G V+IA     R+G      L L D R+ ++  + LG  E +L  G +    FP+ T+SLSD ++  AL + ++  G  + + +    L Y+I ++V    M+   LT    +  L ++ D  N      ++PR +   ++   LP  W    E      +       ++ +  D +V I+FD    K   +        S       +  +FS ++P+  Q  D
Sbjct:   76 VQSKPRHVKEYVAASKLDQHPVFA-------TGEEQFVTLHIPEEFASHWKSHQFTHIHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFTMSLSDANLSTALKIQVQIQGAPLTKDSIQATLHYQIAWRVQNHAMD---LTLPGGEEALFLKIDAGNGATQCTQVPRQLSKEDLIKILPDSWVTNYEKLKEPEEPLRSTEVSMSKRHDKSVAISFDHSHYKKLRNTHHFMGMISDDVIVLDDPETFSKTLPSLMQTHD 350

[Close]

BLAST of MDP0000580739 vs. ExPASy Swiss-Prot
Match: POLG_PVCV1 (Genome polyprotein OS=Petunia vein clearing virus (isolate Shepherd) PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.510e-10
Identity = 67/285 (23.51%), Postives = 120/285 (42.11%), Query Frame = 1

Query:  121 ISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGH-NYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENAN---IKIPRTIRWSEI--NLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTS-------NRNSFSGSMPTDRQGRD 936
            + SK  + K++  AS   +H V         + + +   L  PE+  SH K     +IH G V+IA     R+G      L L D R+ ++  + LG  E +L  G +    FP+ T+SLSD ++  AL + ++  G  + + +    L Y+I ++V    M+   LT    +  L ++ D  +      ++PR +   ++   LP  W    E      +       ++ +  D +V I+FD    K   +        S       +  +FS ++P+  Q  D
Sbjct:   75 VQSKPRHVKEYVAASKLDQHPVFA-------TGEEQFVTLHIPEEFASHWKSHQFTHIHFGAVKIALTYHGRKGQPVVARLALLDTRYLEYQHANLGTAEITLNAGTVFITLFPNFTMSLSDANLSTALKIQVQIQGAPLTKDSIQATLHYQIAWRVQNHAMD---LTLPGGEEALFLKIDAGSGATQCTQVPRQLSKEDLIKILPDSWVTNYEKLREPEEPLRSTEVSMSKRHDKSVAISFDHSHYKKLRNTHHFMGMISDDVIVLDDPETFSKTLPSLMQTHD 349

[Close]

BLAST of MDP0000580739 vs. ExPASy Swiss-Prot
Match: POL_RTBVP (Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) PE=1 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.111e-8
Identity = 46/182 (25.27%), Postives = 79/182 (43.41%), Query Frame = 1

Query:   10 TSSRSNLGTIPDIVNEEQKFEFQTDSSLDFAEWN-IPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHE--TCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEG 546
            ++S SN+    +    E   E   +  ++  +W  +  I    +Y+K W       +  + +  +  A+S  H   T  LF  E I + +  G  Y HIG++ I  K L RR + T +++   D  F    ++ +G +E  +  G   F   PD    + D   L  L + I+T GY+  EG
Sbjct:   17 STSESNIKKGKNSTKRELIEEVDVNQEVENFDWKKLSGIKPNKLYEKNWQEKVKLKQQSIVSAYKEEAISVTHNAYTTTLFPQEVIKNVKNQGKLYYHIGMMAIGVKGLHRRKIGTKVMIMFYDDSFGKAREASIGSIEMDMNAGCGVFYSCPDFAKYIKD---LSHLKIGIQTLGYENYEG 195

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: E6NUA1_9ROSI (JHL23C09.7 protein OS=Jatropha curcas GN=JHL23C09.7 PE=4 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.119e-69
Identity = 189/608 (31.09%), Postives = 305/608 (50.16%), Query Frame = 1

Query:    4 ASTSSRSNLGTIPDIVNEEQKFEF-QTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQ--NSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVD----XGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQT-------SPTASDF--DAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE--KHYEXENQVKVIT----KENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPVIEQNNFTNQSLHIIGKQLDKIETKVDN-------LSXKPLSKEIPLTSFRESPSLKTSTSIKIEQMLHKLE 1740
            +++S+RS     P+I     + E    D S    EW IPK+  + IYK    F  FKT++ +KT E+ + LSK  E   L + + +  H+   + YIHIGL+Q+  KPLTR GLNTSIL  +RDARF +F DS+LG VE+SL  GPI F+ +PD+T+SL+D ++L+++ L IKT  YK+ +G+ P+ALIY+I+YK   +    +   +     T  +QTD    N  IP+TI+W +I LP++W L     P A +     VNL  +EQ+ DG V + F+R             S +      S S+ TD   +    I S+   K K  +      + V  +   +D+ N K++ ++ +  + Q  Y+       ++         SPTAS    +   ++ +L VL++ +      K L ++I   +N+ +       YT E   E+   + D+   N+ EI FFD+ +  K  +    +  IT    +  W+  D+T + S  PP+    +   + ++  +P+K+  +    K VIEQNNF+N SL  +  QL +IE  +++       +  K   K      ++ S S K     K++  L KLE
Sbjct:    8 SASSNRSEDSDNPEIKRVINRNELILQDFSKAIDEWEIPKVDKEQIYKVS-KFNLFKTDYVIKTEERDFQLSKPFERITLLSSKTLQHHKSKKYKYIHIGLIQVGIKPLTREGLNTSILAVVRDARFLNFQDSLLGSVETSLSEGPISFEVYPDMTVSLNDLNILESIVLEIKTHNYKMKQGSIPIALIYKIHYKAMNSAFGTKYKLQPKIGETRFLQTDLTKTNTVIPKTIQWKDITLPNEWILEGVVPPPAPEPVKPNVNLQKIEQFEDGKVTLKFNR-------------SQSMRYTGSSSSVTTDENDKPSSSIPSVIYAKYKEPEHKPIIQTLVKPRYSTSDIPN-KMKGVDYSHSIPQAVYNPVDNYVNQQSNLVNSAPESPTASAITENVSDINRELNVLSKDD----IEKSLIKEISKTKNLIKMKKILKTYTFE---ELKYEYLDYKICNQTEIKFFDWYKLIKENKTAKSLNPITIRDKRPEWIVNDQT-IKSDFPPKTISKLKYQDNEIICAPYKIVHDNDINKKVIEQNNFSNASLICLNSQLKRIEHMLEDKPLVSETIKGKETVKTHMFKPYQISQSSKQEFVNKLKDQLSKLE 592

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BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: Q8H6Q8_PONTR (CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.865e-59
Identity = 158/458 (34.50%), Postives = 244/458 (53.28%), Query Frame = 1

Query:  319 KPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSL---VNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTY----HXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKVITKEN-----------W-VKEDKTVVSSSHPPQETILISTAN--TQVPASPFKLPK---EXAGVKPVIEQNNFTNQSLHIIGKQLDKIETK 1620
            KPLT+ GL+TSIL  LRD RF  F DS+L  +ESSLC GPI FDC+P++TISL D ++LK++ L IKT  YK+++G+ P+ALI++I YK   +  + Q   +S +D TLL+QTD   AN  IP+ I+W +INLP +W ++  + P  I   L     L NV QY DG VK+ F           RS+ S  SN+ S S     +R+      + +L  +  KS    S+       +D+ +  + S++    V  P Y    H  S   ++E + PT+  F A  V   ++ +  +E F  D+  L  D  +  N  ++  F  ++  + K EI + + +F+  +++ I FFD+ E  Y  EN +    KE+           W + +    + S HPP  ++ I       Q+ ASP+K+PK     + +  +I+QNNF N +L+ IGKQL +IE +
Sbjct:  103 KPLTKEGLDTSILAVLRDGRFISFDDSLLSSIESSLCKGPIPFDCYPNITISLKDKNVLKSMILQIKTHNYKMIKGSIPVALIFKISYKAMVSAFSTQHRFQSKRDETLLLQTDLSRANTVIPKPIQWKDINLPEEW-ILEGAAPPTIPKQLEPNTELQNVTQYSDGKVKLLF----------RRSMSSRFSNKESCSSIPTLERKFTKIPSVINLPYQSTKSQPRFST-------SDIPSSSIHSVDYTTNVPHPIYTSSQHVQS-QEEKEPSLPTSPTFSA--VTENVINIIEKE-FELDKTLLHNDFYSDLNKEKKIWFFKQFLNQRK-EIQQIYYEFVNFHKVHILFFDWFE-IYSSENNITYPFKESNPITIRKKIPEWKLSDSDKTIESEHPPLRSLTIDHGEPPIQIRASPYKIPKPNDSDSNLSSIIQQNNFCNTNLNTIGKQLTRIENQ 536

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: A5ARS0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039771 PE=4 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.519e-58
Identity = 169/595 (28.40%), Postives = 285/595 (47.90%), Query Frame = 1

Query:   16 SRSNLGTIPDIVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFF---FDFVEKHYEXENQVKVITKEN-----WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQLDKIETKVDNL----------SXKPLSKEIPLT-SFRESPSLKTSTSIKIEQ 1722
            SR +  +  D+VN  +    +  + LD  +W +PK+S++ IYKK      F T + +KT E   +L +D++  +L     I  H++DG+N+IH G++Q+AAKPLTR GLNTSI++CLRD R   + DSI+G+V++ L + P++F C+P+ T+ + D  +L  + L+IKT G+K+  G  P+++I R  YK   T++   AL  SPK  T    +D  + ++  IP+ I W ++  P +W   N    +A ++    ++ + QY DG  ++ F    R S  S+  +  +  +R S S S+P  R  R+ E  +S   + +K ++   S               +S    + V+ PTY          Q   T S  D              E F  ++  L +D  +  N  R + F S      +    + +  +++  +  I F   F+  ++    +   K I   +     W   D  V+ S HPP+  I  +   T V ASPFK   E  G      ++ +IEQ N+TN  L  +G Q++++E  ++              KPL K   L+  F+E+P +  +   +I Q
Sbjct:    2 SRRSNDSQDDVVNSXEINYPKIXNELD--DWKLPKVSNQEIYKK--GTFKFFTYYTIKTSEMXVSLEQDNQVIRLLDNRSIEKHKRDGNNFIHFGMIQVAAKPLTRLGLNTSIVMCLRDNRHLXYRDSIIGVVQAGLNDDPVYFQCYPNFTVRIRDADILDXVILHIKTHGFKIKPGNSPVSIITRFAYKSMNTSIGSGALCTSPKGETTYFHSDMLDKSBFIIPKKILWKDVEFPENWHFSNAVPAIAQRSE--RIEQIVQYPDGGGELVFSNSFRHS--SSPRVSVYEPSRAS-SSSIPV-RTTREXEGSSSGNPKNIKLIEENXSTQ-------------ESQXDESPVMSPTY---------SQMINTISLSD--------------EDFEINKDFLRKDFYSEVNKQRNDWFFSTVPKVIRTIYQEEFYAYLRQEKKNIKFWIWFELFKQEEYPDYPCKCINNTSTKAKIWKTSDNIVIESIHPPKAKIEKNINGTIVTASPFKTKPEDKGTTSATDIRRIIEQINYTNMFLITLGNQVNRVEEIIETQDHLKKSFVKNDNKPLFKNFELSRKFQENPQIDQAFIDRISQ 550

HSP 2 Score: 156.762 bits (395), Expect = 1.337e-35
Identity = 73/209 (34.93%), Postives = 126/209 (60.29%), Query Frame = 1

Query:  184 VKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFD 807
            +KT E   +L +D +  +L     I  H++DG+N+IH G++ +A KPLTR G+NTSI++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT G+K+  G  P+++I R  YK    ++   AL  SPK  T    +D    ++  IP+ I  +++  P +W   N    +A ++   +++ + QY D
Sbjct: 1392 IKTSEMTVSLEQDDQVIRLLDNRSIEKHKRDGYNFIHFGMIXVAXKPLTRLGVNTSIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHGFKIKPGNSPVSIITRFAYKSMNXSVESXALCTSPKGETTYFHSDMLXKSDFIIPKKILXNDVEFPENWHFANAIPAIAQRSK--SIEQIVQYPD 1598

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: A5BZZ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023751 PE=4 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.850e-55
Identity = 150/520 (28.85%), Postives = 254/520 (48.85%), Query Frame = 1

Query:  118 KISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLL--VLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE-------KHYEXENQVKVITKEN-WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQLDKIETKVD 1626
            K+S++ IYKK      F T + +KT E + +L +D +  +L     I  H++D +N+IH G++Q+A KPLTR GLNTSI++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT  +K+  G  P+++I R  YK   T++   AL  SPK  T     D  + ++  IP+ I W ++  P +W   N    +A ++   +++ + QY DG  ++ F    R S  S+  +  +  +R S S S+P  R  R++E  NS  N K                    N KL  + ++  V +P Y   +   +E Q           P + Q++  +    E F  ++  L +D  +  N  R + F +      +    K +  ++   +  I F+ + E         Y  +      TK   W   D  V+ S HPP+  I  +   T + ASPFK   E  G      ++ ++EQ N+TN  L  +G Q++K+E  ++
Sbjct:  413 KVSNQEIYKK--GTFKFFTNYTIKTSEMSVSLEQDDQVIRLLDNRSIEKHKRDDYNFIHFGMIQVAVKPLTRLGLNTSIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHDFKIKPGNSPVSIITRFAYKSMNTSVGSGALCTSPKGETTYFHLDMLDKSDFIIPKKILWKDVEFPENWHFANAVPAIAQRSE--SIEQIVQYPDGGGELIFSNSFRHS--SSPRVSVYEPSRAS-SSSIPV-RTTREEEGSNS-GNPK--------------------NIKLTGVRSHTNVARPFYTEENESTQESQQD---ESLVMSPTYSQMINTISLSDEDFEINKDLLRKDFYSEVNKQRNDWFFNTVPKVIRTIYQKEFYAYLGQEKKNIKFWIWFELFKQEDYPDYPCKRINNTSTKAKIWKTSDNIVIESIHPPEAKIEKNINGTIITASPFKTKPEDKGTVSATDIRRIMEQINYTNMFLITLGNQVNKVEEIIE 900

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: A5BD41_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_008274 PE=4 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.866e-54
Identity = 161/616 (26.14%), Postives = 293/616 (47.56%), Query Frame = 1

Query:   46 IVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTY--HXPSIPPKEEQTSPTASDFDAEPVHHQLL--VLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE-------KHYEXENQVKVITKEN-WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQLDKIETKVDNL----------SXKPLSKEIPLT-SFRESPSLKTSTSIKIEQMLHKLEKD---KSVRIQKMKVLIPSFK 1794
            +VN E+    +  + LD  +W +P +S++ IYKK      F T++ +KT E + +L +D +  +L     I  H++DG+N+IH G++Q+AAKPLT+ GLNTSI++CLRD R   + +SI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT G+K+      +++I R  YK   T++ F+AL  SPK  T    +D  + ++  IP+ I W ++  P +W  +N    +A ++   +++ + QY DG  ++     +    D   +L+    N        P + Q    +L                          L   KL  + ++  V +P Y     S    +++ SP  S     P + Q++  +    E F  ++  L  D  +  N  R + F S      +    + +  +++  +  I F+ + E        +Y  ++     TK   W   D  V+ S H P+  I  +   T V ASPFK   +  G      ++ ++EQ N+TN  L  +G Q++++E  ++              KPL K   L+  F+E+P +  +   +I Q  H  +++   K++ I+ ++  I  +K
Sbjct:  483 VVNSEEINYPKIQNDLD--DWKLPNVSNQEIYKK--GTFKFFTDYTIKTFEMSVSLEQDDQVIRLLDNRSIEKHKRDGYNFIHFGMIQVAAKPLTKLGLNTSIVMCLRDNRHLXYRNSIIGAVQAGLNDGPVYFQCYPNFTVRIRDADILDSVVLHIKTHGFKIKPXNXXVSIITRFAYKSMNTSVGFRALCTSPKGETTYFHSDMLDKSDFIIPKKILWKDVEFPENWHFVNVVPAIAQRSE--SIEQIVQYPDGGGEL----VSPTLSDIPAALEFLFMN--------PLELQALPSQL------------------------EXLXKKKLTDVRSHTNVARPFYTEENESTQEFQQEESPVMS-----PTYSQMINTISLSDEDFEINKDLLRXDFYSEVNKQRNDWFFSTVPKVIRTIYQEEFYAYLRQEKKNIKFWIWFELFKQEEYPNYPCKHINNTSTKAKIWKTSDNIVIESIHXPKAKIEKNINGTIVTASPFKTKPKDKGTASAIDIRRIMEQINYTNMFLITLGNQVNRVEEIIETQDHLKKSFVKNDNKPLFKPFELSKKFQENPQIDQAFIDRISQKDHSDKQEIILKTLTIKDLQEEIGQYK 1051

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: A5C143_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023373 PE=4 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.743e-54
Identity = 172/569 (30.23%), Postives = 275/569 (48.33%), Query Frame = 1

Query:   46 IVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKVITKEN-WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQ--LDKIETKVDNLSXKPLSKEIPLT-SFRESPSLKTSTSIKIEQ 1722
            +VN E+    +  + LD  +W +PK+S++ IYKK      F T++ +KT E   +L +D +  +L     +  H+KDG+N+IH G++Q+AAKPLTR GLNT+I++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ L D  +L ++ L+IKT G+K+  G  P+++I R  YK   T++   AL  SPKD +  I          IP+ I W +++ P +W   N    +A ++   +++ + QY DG  ++ F +  R S  S+  +  +  +R S S S+P  R  R++E  +S   + +K     ++++  +          +  E N  +++                    DF +E V+ Q     R + F     K+ R I   E           Y  +EK  I K W  F    + E          Y  +      TK   W   D   + S HPP+  I  +   T V ASPFK   E  G      +  ++EQ N+TN  L  +G Q  L K   K DN   KPL K   L+  F+E+P +  +   KI Q
Sbjct:  560 VVNSEEINYPKIQNDLD--DWKLPKVSNQEIYKK--GTFKFFTDYTIKTSEMTVSLEQDDQVIRLLDNRSVEKHKKDGYNFIHFGMIQVAAKPLTRLGLNTAIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGFKIKPGNSPVSIITRFAYKSMNTSVGSGALCTSPKDKSDFI----------IPKKILWKDVDFPENWHFANAVPAIAQRSE--SIEQIVQYPDGGGELVFSKSFRHS--SSPRVSVYEPSRAS-SSSIPV-RTTREEEGSSSGNPKNVKLTGMINTISLSD----------EDFEINKDLLR-------------------KDFYSE-VNKQ-----RNDWFFSTXPKVIRTIYQEEFY--------AYLRQEKKNI-KFWIWFELFKQXEY-------PXYPCKXINNTSTKXKIWKTSDNIXIESIHPPEAKIEKNINGTIVTASPFKTKPEDKGTASASDIXRIMEQINYTNMFLITLGNQDHLKKPFVKNDN---KPLFKPFELSKKFQENPQIDQAFIDKISQ 1054

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: C5Y875_SORBI (Putative uncharacterized protein Sb05g007360 OS=Sorghum bicolor GN=Sb05g007360 PE=4 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.422e-53
Identity = 160/550 (29.09%), Postives = 255/550 (46.36%), Query Frame = 1

Query:  223 HETCQLFTPEQINSHR-KDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE----KHYE-----------------XENQVKVITK--ENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPV--------IEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEI----PLTSFRESPSLKTSTSIKIEQM---LHKLEKDKSV 1755
            HET  L +  +IN  R K  ++Y+H GLVQ+A + LTR+GLN SIL CLRD R   F DS+LGMVE+SL NGP+ F+ FPD ++SLSDP++ KALT N++TSG+ +  G++ +++ YRIYYK   T++   A   +PK  + L+Q +  N NI  P+ ++W EI LP  W L     P  ++ +   + ++ +  DG V++                 +F+S R +F  S P+                   S+D    +  Q                   +V  TY   S  P        A + D +P       + R++ F  D++ L R+I   +N  ++  +        +L+I + W   M   +  IFFFD+ E    +H+E                    ++ +I K  ++W       V + HPP E I +      + A P K        +P+        +EQ N++N SLH +G+Q ++IE  + +   KP   E+    P +S  E P  +      + QM   + KL K K++
Sbjct:    2 HETLHLLSEREINDIRAKPQYHYLHFGLVQVAIRSLTRKGLNVSILACLRDCRNKRFQDSLLGMVEASLSNGPVFFNTFPDFSVSLSDPNINKALTQNLQTSGFDLEPGSENISVTYRIYYKAM-TSLAPCAKQYTPKGLSTLLQANPRN-NIITPKALKWEEIRLPEKWTLTQAVEPQTLEQT--EIQSISETPDGDVEV-----------------AFSSKRKAFVQSRPS------------------VSIDNRPQMKPQ------------------NIVYATYEDNSYEPSISDFEINAIEID-DPELQTYCYIVREKEFQIDKELLRREIALPKNKAKKERYFKNVDQPFRLKIREVWHKEMIEQKKNIFFFDWYENSQIRHFEEFFKPGSKQKDKIEPESDNEKITMIKKVSKDWKTTSGKQVEAVHPPFEPIQLEAKGESIKACPLKNISRATYAEPIKVEHIGHLVEQQNYSNISLHALGQQTERIEAILTD-GTKPNKSEVKVNLPSSSHSEVPQTQIVIPPFVPQMASSIFKLGKQKAM 492

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: C5Y6X7_SORBI (Putative uncharacterized protein Sb05g025330 OS=Sorghum bicolor GN=Sb05g025330 PE=4 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.422e-53
Identity = 162/559 (28.98%), Postives = 257/559 (45.97%), Query Frame = 1

Query:  223 HETCQLFTPEQINSHR-KDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE----KHYE-----------------XENQVKVITK--ENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPV--------IEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEI----PLTSFRESPSLKTSTSIKIEQML---HKLEKDKSVRIQKMKVLI 1782
            HET  L +  +IN  R K  ++Y+H GLVQ+A + LTR+GLN SIL CLRD R   F DS+LGMVE+SL NGP+ F+ FPD ++SLSDP++ KALTLN++TSG+ +  G++ +++ YRIYYK   T++   A   +PK  + L+Q +  N NI  P+ ++W EI LP  W L     P  ++ +   + ++ +  DG V++                 +F+S R +F  S P+                   S+D    +  Q                   +V  TY   S  P          + D +P       + R++ F  D++ L R+I   +N  ++  +        +L+I + W   M   +  IFFFD+ E    +H+E                    ++ +I K  ++W       V + HPP E I +      + A P K        +P+        +EQ N++N SLH +G+Q ++IE  + +   KP   E+    P +S  E P  +      + QM     KL K K++     + LI
Sbjct:    2 HETLHLLSEREINDIRAKPQYHYLHFGLVQVAIRSLTRKGLNVSILACLRDCRNKRFQDSLLGMVEASLSNGPVFFNTFPDFSVSLSDPNINKALTLNLQTSGFDLEPGSENISVTYRIYYKAM-TSLAPCAKQYTPKGLSTLLQANPRN-NIITPKALKWEEIRLPEKWTLTQAVEPQTLEQT--EIQSISETPDGDVEV-----------------AFSSKRKAFVQSRPS------------------VSIDNRPQMKPQ------------------NIVYATYEDNSYEPSISDFEINVIETD-DPELQTYCYIVREKEFQIDKELLRREIALPKNKAKKERYFKNVDQPFRLKIREVWHKEMIEQKKNIFFFDWYENSQIRHFEEFFKPGSKQKDKIEPESDNEKITMIKKVSKDWKTTSGKQVEAMHPPFEPIQLEAKGESIKACPLKNISRATYAEPIKVEHIGHLVEQQNYSNISLHALGQQTERIEVILTD-GTKPNKSEVKVNHPSSSHSEVPQTQIVIPPFVPQMASSNFKLGKQKAMESSVSEELI 501

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: C5Y391_SORBI (Putative uncharacterized protein Sb05g019550 OS=Sorghum bicolor GN=Sb05g019550 PE=4 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 3.169e-53
Identity = 161/550 (29.27%), Postives = 254/550 (46.18%), Query Frame = 1

Query:  223 HETCQLFTPEQINSHR-KDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVE----KHYE-----------------XENQVKVITK--ENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAGVKPV--------IEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEI----PLTSFRESPSLKTSTSIKIEQML---HKLEKDKSV 1755
            HET  L +  +IN  R K  ++Y+H GLVQIA + LTR+GLN SIL CLRD R   F DS+LGMVE+SL NGP+ F+ FPD ++SLSDP++ KALTLN++TSG+ +  G++ +++ YRIYYK   T++   A   +PK  + L+Q +  N NI  P+ ++W EI LP  W L     P  ++ +   + ++ +  DG V++                 +F+S R +F  S P+                   S+D    +  Q                   +V  TY   S  P          + D +P       + R++ F  D++ L R+I   +N  ++  +        +L+I + W   M   +  IFFFD+ E    +H+E                    ++ +I K  ++W       V + HPP E I +      + A P K        +P+        +EQ N++N SLH +G+Q ++IE  + +   KP   E+    P +S  E P  +      + QM     KL K K++
Sbjct:    2 HETLHLLSEREINDIRAKPQYHYLHFGLVQIAIRSLTRKGLNVSILACLRDCRNKRFQDSLLGMVEASLSNGPVFFNTFPDFSVSLSDPNINKALTLNLQTSGFDLEPGSENISVTYRIYYKAM-TSLAPCAKQYTPKGLSTLLQANPRN-NIITPKALKWEEIRLPEKWTLTQAVEPQTLEQT--EVQSISETPDGDVEV-----------------AFSSKRKAFVQSRPS------------------VSIDNRPQMKPQ------------------NIVYATYEDNSYEPSISDFEINVIETD-DPELQTYCYIVREKEFQIDKELLRREIALPKNKAKKERYFKNVDQPFRLKIREVWHKEMIEQKKNIFFFDWYENSQIRHFEEFFKPGSKQKDKIEPESDNEKITMIKKVSKDWKTTSGKQVEAVHPPFEPIQLEAKGESIKACPLKNISRATYAEPIKVEHIGHLVEQQNYSNISLHALGQQTERIEAILTD-GTKPNKSEVKVNLPSSSHSEVPQTQIVIPPFVPQMASSNFKLGKQKAM 492

[Close]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Match: A5BVS5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031958 PE=4 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.873e-51
Identity = 160/548 (29.20%), Postives = 262/548 (47.81%), Query Frame = 1

Query:   94 DFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQ-ENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPR--RNIFRSK---YTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKVITKENWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXAG------VKPVIEQNNFTNQSLHIIGKQL--------------DKIETKVDNLSXKPLSKEI 1659
            D  +W + K+S+  IYKK      F T++ + T   + +L +D +  +L     I  H++DG+N+IH G++Q+AAKPLTR GLNTSI++CLRD R  ++ DSI+G V++ L +GP++F C+P+ T+ + D  +L ++ L+IKT G+K+  G  P+++I R  YK   T++   AL  SPK  T    +D    ++  IP+ I W ++  P +W   N     AI     +++ + QY DG  ++ F    R    S+  +  +  +R S S S+P  R  R++E               GSS    +      N KL  + ++  ++                + + SD D E ++  LL   R++   Y      R+      +P+  R I++ +   Y  +EK  I K W  F    + E  + D+  K     +    I    W   D  V+ S HPP+  I  +   T V  SPFK+  E  G      ++ ++EQ N+TN  L  +G Q+              DK E  ++ L+ K L +EI
Sbjct:  118 DLNDWKLXKVSNXEIYKK--GTFKFFTDYTIXTSXMSVSLEQDDQVIRLLDNRSIKKHKRDGYNFIHFGMIQVAAKPLTRLGLNTSIVMCLRDNRHLEYRDSIIGAVQAGLNDGPVYFQCYPNFTVRIRDVDILDSVVLHIKTHGFKIKPGNSPVSIITRFAYKSMNTSVGSGALCTSPKGETTYFHSDMLXKSDFIIPKKILWKDVEFPENWHFAN--AVPAIAQRFESIEQIVQYLDGGGELVFPNSFRHL--SSPRVSVYEPSRAS-SSSIPV-RTTREEE---------------GSSSGNPK------NIKLTGVRSHTNMI---------------NTISLSDEDFE-INKDLL---RKD--FYSEVNKQRNDWFFNTIPKVIRTIYQGEFYAYLRQEKKNI-KFWIWFELFKQEE--YPDYPGKRINNTSTKAKI----WKTSDNIVIESIHPPEAKIEKNINGTIVTTSPFKIKPEDKGTASATDIRRIMEQINYTNMFLITLGNQVNQRTSIQNPFEDHSDKQEIILNTLTIKDLQEEI 608

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0005s18930.1 ()

HSP 1 Score: 255.758 bits (652), Expect = 6.958e-68
Identity = 161/476 (33.82%), Postives = 256/476 (53.78%), Query Frame = 1

Query:    4 ASTSSRSNLGTIPDIVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQ--NSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELIN--SLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDA--EPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKVITKEN 1413
            +STS  S    I  + +EE   E   D + +  +W IPKIS   IY+K   +  FKT+  +KT E+   L+K  ET QL + + +  H    + YIH+GLVQ+  KPLT+ GLNTSIL  LRD RF +F DS+L  ++SSLC+GP+ FDC+P++TISL D ++L+++ L IKT  Y +LEG+ P+ALI++I+YK   +    +   +S K  TLL+QT+   +N  +P+ I+W +I+L  DW L   + P   Q     V + N+ QY DG VK++F R          S  S  S+  S S ++   R  +   +IN     NR  KS             +D+ +   Q+ +    + +P Y        E+ + PT+  F A  E + ++L VLT ++ F  ++     D     N+ +R  F   +  +++ +I K + D+++ + ++I FFD+ E HY+     K I ++N
Sbjct:   14 SSTSESSESRRI--VQSEEITIE---DFTKNIDDWKIPKISQTQIYQKS-KYNIFKTDFTIKTEERDIQLTKPFETIQLLSQKSLQKHLAQNYKYIHVGLVQVGIKPLTKEGLNTSILAVLRDTRFQNFQDSLLSSIKSSLCSGPVSFDCYPNITISLKDKNILQSMLLQIKTHNYDMLEGSIPVALIFKIHYKAMFSAFASKHKFQSQKGETLLLQTNLSRSNTVVPKAIQWKDISLLEDWILEGAAPPELPQPPQPNVQIKNITQYTDGKVKLSFHR---------HSTSSRFSDGLSSSSTIDLGRISKILSVINIPYHTNRPRKST------------SDIPSTSFQNADYTTNIPKPVY-----TDLEQPSPPTSPTFSAVIENIQNELNVLTSEKHFVINKTLFKSDFYGDHNIEKRTWFFHHF-LQQRNDIQKQFYDYIEIHEVQILFFDWFEFHYDTLTNTKHIIQQN 456

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0011s03170.1 ()

HSP 1 Score: 217.624 bits (553), Expect = 2.100e-56
Identity = 148/459 (32.24%), Postives = 238/459 (51.85%), Query Frame = 1

Query:    4 ASTSSRSNLGTIPDIVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRP--VAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHY 1374
            +STS  S    I  + +EE   E   D + +  +W IPKIS   IY+K   +  FKT+  +KT E+   L+K  ET QL + + +  H    + YIH+GL           GLNTSIL  LRDARF +F DS+L  +ESSL +GP+ FDC+P++TISL D ++L+++ L IKT  Y +LEG+  +ALI++I+YK   +    +   +S K  TL +QTD   +N  + + I+W +I+LP DW L   + P         V + N+ QY DG VK++F R          S  S  S  +S S  +   R  +   +IN   +  L           ++  +D+ +   Q+ +    + +P Y   ++      TSPT S    E + ++L VLT ++ F  ++  L  D     N+ +R+ F  ++  +++ +I   +   ++T+ ++I FFD+ E HY
Sbjct:   14 SSTSKSSESRRI--VQSEEITIE---DFTKNIDDWKIPKISQTQIYQKS-KYDIFKTDFTIKTEERDIQLTKPFETIQLLSQKSLQKHLARNYKYIHVGL----------EGLNTSILAVLRDARFQNFQDSLLSSIESSLYSGPVSFDCYPNITISLKDKNILQSMLLQIKTHNYDMLEGSILVALIFKIHYKAMFSAFASKHKFQSQKGETLQLQTDLSRSNTVVSKAIQWKDISLPEDWILEGAAPPELPPPPQPNVQIKNITQYTDGKVKLSFHR---------HSTSSRFSETSSSSSIIDLGRISKIPFVINIPYHANL----------PRKSTSDIPSTSFQNADYTTNIPKPVY--TNLEQTSPPTSPTFS-VVTENIQNELNVLTSEKHFVINKPLLKSDFYGDHNMEKRSCF-FQHFLQQRNDIQNQFYACIETHNVQILFFDWFEFHY 433

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0002s22830.1 ()

HSP 1 Score: 199.134 bits (505), Expect = 7.729e-51
Identity = 126/351 (35.90%), Postives = 184/351 (52.42%), Query Frame = 1

Query:  184 VKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELIN--SLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDA--EPVHHQLLVLTRQEPFXYDRKKLCRD 1224
            +KT E+   L K  ET QLF+ + +  H    + YIH+GLVQ+  KPLT+ GLNTSIL  LRDARF +F DS+L  +ESSLC+GPI FDCFP++TISL D ++L+++ L IKT  Y +LEG+ P+ALI++I+YK   +    +   +S K  TL +QTD    N  +P+ I W +I+LP DW L                       DG VK++F R          S  S  S  +S S ++   R  +   +IN    AN   KS            I+D+ +   Q+ +    + +P Y        E+ + PT+  F A  E + ++L VLT ++ F  ++    RD
Sbjct:   25 IKTEERDIQLIKPFETIQLFSQKSLQKHLARNYKYIHVGLVQVGIKPLTKEGLNTSILAVLRDARFQNFQDSLLSSIESSLCSGPISFDCFPNITISLKDKNILQSMLLQIKTYNYDMLEGSIPVALIFKIHYKAMFSTFASKHKFQSKKGETLPLQTDLSRLNTVVPKAIHWKDISLPEDWIL----------------------EDGKVKLSFHR---------HSTSSRFSEDSSTSSTIDLGRIFKIPSVINIPYHANPNRKS------------ISDIPSTSFQNADYTTNIPKPVY-----TDLEQPSPPTSPTFSAVTENIQNKLNVLTSEKHFVINKTLFIRD 327

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0010s00240.1 ()

HSP 1 Score: 165.236 bits (417), Expect = 1.237e-40
Identity = 84/184 (45.65%), Postives = 120/184 (65.22%), Query Frame = 1

Query:  280 HNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQ--NSLVNLDNVEQYFDGTVKIN 825
            + YIH+GLVQ+  KPLT+ GLNTSIL  LRDARF +F DS+L  +E SLC+  + FDC+P+LTISL D ++L+++ L IKT  Y +LEG+  +ALI++I+YK   +    +   +S K  TLL+QTD   +N  +P+ I+W +I L  DW L   + P   Q     V + N+ QY DG VK++
Sbjct:   31 YKYIHVGLVQVEIKPLTKEGLNTSILAILRDARFHNFQDSLLSFIEFSLCSSLVSFDCYPNLTISLIDKNILQSMLLQIKTHKYNMLEGSIFVALIFKIHYKAMFSAFASKHKYQSRKGETLLLQTDLSRSNTIVPKAIQWKDITLLDDWILEGATHPRIPQPPQPNVQIKNITQYTDGKVKLH 214

HSP 2 Score: 53.5286 bits (127), Expect = 5.245e-7
Identity = 39/136 (28.68%), Postives = 69/136 (50.74%), Query Frame = 1

Query: 1240 NVPRRNIFRSKYTTEEKLEIH---KAWKDFMQTNRLEIFFFDFVEKHYEXENQVK-----------VITKEN---WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKE--XAGVKPVIEQNNFTNQSLHII 1590
            NV  +NI  ++YT + K+++H     + ++++ +++ I FFD+ E HY   + V            + T+     W       V S HPP   I I+  +  V A+P+K+P +   +  K +I QNNFTN +L+ +
Sbjct:  197 NVQIKNI--TQYT-DGKVKLHDIQNKFYNYIEIHKVRILFFDWFEIHYASAHHVTYPFASIKHACPITTRSKTPVWKLTSGPSVVSDHPPLRNIQITHNSKIVDAAPYKIPSDDTLSNTKHIIHQNNFTNINLNTL 329

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0005s17220.1 ()

HSP 1 Score: 153.295 bits (386), Expect = 4.864e-37
Identity = 84/211 (39.81%), Postives = 125/211 (59.24%), Query Frame = 1

Query:  250 EQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFT 882
            + +  H+     YIH+G +Q+  KPLT+ GLNT IL+ L+DARF +F DS+   +ESSLC GPI F C+P+LTI L D ++L+++ L IKT  Y +LEG+ P+ALI++I YKV  +    +   +S K  TLL+QT+   +N  +PR           +W  I E  P    N  + +  + QY +G VK++F R +  S  S++S  S T
Sbjct:    3 KSLQKHQDRNSKYIHVGFIQVGIKPLTKEGLNTFILVVLKDARFQNFQDSLFSSIESSLCTGPIFFYCYPNLTIPLKDRNILQSMILQIKTYNYNMLEGSIPVALIFKIRYKVMFSTFASKHKFQSQKGETLLLQTNLSRSNTVVPR-----------NW--IFEGAPQRQPN--IQIKEITQYTNGKVKLSFHRHSTSSRFSDKSSSSGT 198

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0001s20540.1 ()

HSP 1 Score: 150.599 bits (379), Expect = 3.152e-36
Identity = 75/162 (46.30%), Postives = 109/162 (67.28%), Query Frame = 1

Query:  157 FASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHT 642
            F  FKT+  +KT E+   L+K  ET QL   + +  H+   +  IHIGLVQ+  KPLT+ GLNTSIL   RDARF +F DS+L  +ESSLC+GP+ F+C+P+LTISL D ++L+++TL +KT  Y +LEG+ P+ALI++I+YK   +  +    +    D+T
Sbjct:    7 FDFFKTDFTIKTEERDIQLTKPFETIQLLYKKSLQ-HQDRNYKCIHIGLVQVGIKPLTKEGLNTSILAVFRDARFQNFQDSLLSSLESSLCSGPVSFNCYPNLTISLRDRYILQSMTLQMKTHNYNMLEGSIPIALIFKIHYKAMKSTSDIPNTSFQNADYT 167

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0008s21810.1 ()

HSP 1 Score: 150.214 bits (378), Expect = 4.117e-36
Identity = 117/432 (27.08%), Postives = 201/432 (46.53%), Query Frame = 1

Query:  535 VLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRP--VAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHYEXENQVKV----------ITKEN----WVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKEXA--GVKPVIEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEIPLTSFRESPSLKTSTSIKIEQMLHK---LEKDKSVRIQK 1767
            +LEG+  +ALI++I+YK   +    +   +S K  TLL+QTD   +N  +P+ I+W +I+L  DW L   + P    +    V + N+ QY DG VK++F R          S  S  S  +S S ++   R  +   +IN L +  L           ++  +D+ +   Q+ +    + +P Y   ++      TSPT S    E + ++L VLT ++ F  D+     D  +  N  +R            LEI + + +F++ ++++I FFD+ E +Y  E+ +            +T  +    W    +  V S HPP   I I+  N  V A+P+KL  + A    K +I QNNFTN +L+ +GKQL ++E ++   +               S  +KTST +K++  + K   + K    +IQ+
Sbjct:    1 MLEGSIHVALIFKIHYKAMFSAFASKHKFQSQKGETLLLQTDLSRSNTVVPKVIQWKDISLLEDWILEGAAPPEIPPLPQPNVQIKNITQYTDGKVKLSFHR---------HSTSSRFSEASSSSNTIDLGRISKIPSVINILYHENL----------PRKSTSDIPSPSFQNADYTTNIPKPVY--TNLDQPSPPTSPTFSAI-TENIQNELNVLTSEKHFVLDKTLFKEDFYSTCNSFQRGFLFD-------LEIQQQFYNFIELHKIQILFFDWFELYYAFEHHISYSFASIKHACPVTSRSKTPVWNLTSRPTVESEHPPLRNIQITHNNQTVEAAPYKLSTDDALSNTKHIINQNNFTNTNLNTLGKQLTRLEKQIQRTT-------------TSSVGIKTSTDLKLKNPVFKPYQITKTSQTQIQE 390

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0011s09490.1 ()

HSP 1 Score: 145.206 bits (365), Expect = 1.324e-34
Identity = 70/145 (48.28%), Postives = 101/145 (69.66%), Query Frame = 1

Query:  301 LVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCL 735
            LVQ+  KPLT+ GLNTSIL  LRDA+F +F DS+L  +ESSLC+GP+ FD +P+LT+SL   ++L+++ L IKT  Y +LEG+   ALI++I+YK   +  + +   +S K  TLL+QTD   +N  +PR I+W ++ LP DW L
Sbjct:    2 LVQVGIKPLTKEGLNTSILEVLRDAKFQNFQDSLLSSIESSLCSGPVSFDYYPNLTMSLKYRNILQSMILKIKTHNYNMLEGSILAALIFKIHYKAMFSAFSSKHKFQSQKGETLLLQTDIFRSNTVVPRAIQWKDVTLPKDWIL 146

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0003s02870.1 ()

HSP 1 Score: 130.954 bits (328), Expect = 2.585e-30
Identity = 100/367 (27.25%), Postives = 170/367 (46.32%), Query Frame = 1

Query:  640 TLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRP--VAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFFDFVEKHY-----------EXENQVKVITKE---NWVKEDKTVVSSSHPPQETILISTANTQVPASPFKLPKE--XAGVKPVIEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEIPLTSFRESP 1686
            TLL+QTD   +N  +P+ I+W  I+LP DW L   + P         V + N+ QY DG VK++F R          S  S  S  +S S ++   R  +   +IN   +  L           ++  +D+ +   Q+ +    + +P Y    +      TSPT S    E + ++L VLT ++ F  ++  L  D     N+ +R+ F  ++  +++ +I K +  +++T+ ++I FFD+ E HY             ++   + T+     W       V S HPP   I +S  +  V A+P+KLP E      K +I+QNNFTN +LH IGKQL  +E  +       ++ + P+    ++P
Sbjct:   30 TLLLQTDLSRSNTVVPKAIQWKGISLPEDWILEGVAPPELPPPPQPNVQIKNITQYTDGKVKLSFHR---------HSTSSRFSETSSSSSTIDLGRIFKIPFVINIPYHANL----------PRKSTSDIPSTSFQNADYTTNIPKPIY--TDLEQPSPSTSPTFSAV-TENIQNELNVLTSEKHFVINKPLLKSDFYGDHNMEKRSWF-FQHFLQQRNDIQKQFYAYIETHNVQILFFDWFEFHYVSAQHIAYPFASIKHACPITTRSKTPTWTLTSGPTVESDHPPLRNIQLSHKDQTVDAAPYKLPGEDTLTNTKHIIQQNNFTNTNLHTIGKQLTGLEKHIQKNPAHFITDKTPIDLKLKNP 373

[Close]

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Match: POPTR_0004s21010.1 ()

HSP 1 Score: 119.013 bits (297), Expect = 1.016e-26
Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 1

Query:    7 STSSRSNLGTIPDIVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPI 441
            S+SS S       I+N E+        S+D  +W IPK+S   IY+  + F  FKT+  +K  E+   L+K  ET QL + + +  H+   + YIHIGLVQI  KP T+ GLNTSIL  LRDARF +F D +L  +ES+LCNGPI
Sbjct:   12 SSSSTSESSESKRIINSEEITIEYFTKSID--DWKIPKVSKTQIYQN-FKFDLFKTDFTIKIEERDIQLTKPFETIQLLSKKSVQKHQDCNYKYIHIGLVQIGIKPFTKEGLNTSILAVLRDARFQNFQDFLLSSIESNLCNGPI 153

[Close]

BLAST of MDP0000580739 vs. GDR
Match: ppa021024m ()

HSP 1 Score: 172.555 bits (436), Expect = 5.427e-43
Identity = 98/242 (40.50%), Postives = 143/242 (59.09%), Query Frame = 1

Query:   94 DFAEWNIPKISSKNIYKKKWAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNF---QALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDG 810
            +   W+IP++   +IY K     +F++++ +KTVE+                    SH    +NY+HIGLVQIA KPLTR GL  SILLC+RD R   F+DS+LG+V S+L  GPI+F+CFP+ +++LSD ++LKALTLNI+T  Y +   +Q LA+IYR+ YKV    MN    +A     K  T L QT+ E +N+ +P+ I+WS+I LP  W L   +    ++N       + Q+ DG
Sbjct:   17 ELCNWDIPRVPITDIYYK--GSFNFRSDYAIKTVEKTI------------------SHLDKKYNYLHIGLVQIAVKPLTRTGLPNSILLCVRDGRLRKFTDSLLGIVGSTLGEGPIYFNCFPNFSVALSDINVLKALTLNIQTQDYDMDPRSQNLAIIYRVSYKV----MNIVCPKAKDLDSKGETTLFQTNLEKSNVAVPKMIKWSDITLPEKWILDEVAPKKPLENQ--EPTRILQFADG 232

HSP 2 Score: 68.1662 bits (165), Expect = 1.442e-11
Identity = 67/234 (28.63%), Postives = 104/234 (44.44%), Query Frame = 1

Query: 1099 PPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXYDRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFFF---DFVEKHY---EXENQVKVITKE--NWVKEDKTVVSSSHPPQETILISTANTQVPASPFK--------------LPKEXAGVKPVIEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLSKEIPLTSFRESPSLKTSTSIKIEQMLHK 1734
            PP+ E   PT  D + E        +   + F  + KK+ RD  ++ENV +R  F + +  + +  + KA   FM+  +   FFF   D+  K Y   E  N +++I      +  +D  +V + HPP+  I        V A+P+K                KE  G   VI+QNN+TN  L  +GKQ+ +IET V   S K    E P  S  +       T +K+++ L K
Sbjct:  252 PPQPE---PTFLDVEFE--------INMIKSFEIEHKKIKRDYLSIENVDKRIWFETTFRKDRQDHLWKAHTTFMKEKKFNYFFFAWLDWCAKKYNIHEYMNNIEMIGSPFLTYTSKDGQLVKARHPPEMVI----KQKDVIAAPYKETTFLEDSANNFCTASKEDIGA--VIQQNNYTNLFLQSLGKQVTRIETSV---SMKEQKSE-PGPSETKRNKEPKCTDMKLKKQLDK 464

[Close]

BLAST of MDP0000580739 vs. GDR
Match: ppa016797m ()

HSP 1 Score: 154.451 bits (389), Expect = 1.529e-37
Identity = 101/273 (37.00%), Postives = 142/273 (52.01%), Query Frame = 1

Query:  280 HNYIHIGLVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFDCFPDLTISLSDPHMLKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESRPVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSFSGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSLETNAQVVQPTYHXPSI 1098
            +NY+ IGLVQ+A KPLTR GL +SILLC+RD R   F DS+LG+VES+L  G I+F+ F + +I+LSD ++LKALTLNI+T GY +  G+Q L +IYR+ YKV  T    +A     K  T L QT+ E +N+ +P+ I+WS+I LP    L + SR             + Q+ DG V+I F    +   D   S      +R+S S     D        I    N         SS T   ++ ++L   L     N + +    H   I
Sbjct:    5 YNYLCIGLVQVAMKPLTRTGLPSSILLCVRDGRHRKFPDSLLGIVESTLGKGSIYFNWFSNFSIALSDINILKALTLNIQTWGYDMDPGSQNLVIIYRVSYKVINTVCR-KAKDLDSKGETTLFQTNIEKSNVAVPKMIKWSDITLPR---LSHNSR-------------ISQFADGEVEIQFSSARKTRIDLAPSRSDLEPHRSSTSSGRAYDLDHEPD--IGFRRNPPQLEPTCSSSYTIFSIVMNILRLCLHKCHANLESIMVEGHTKDI 258

[Close]

BLAST of MDP0000580739 vs. GDR
Match: ppb016318m ()

HSP 1 Score: 60.077 bits (144), Expect = 3.926e-9
Identity = 44/126 (34.92%), Postives = 60/126 (47.62%), Query Frame = 1

Query:  367 RDARFXDFSDSILGMVESSLCNG--PIHFDCFPDLTISLSDPHMLKALTLNIK-TSGYKVLEGTQPLALIYRIYYKVTGTNMNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCL 735
            R  R  +  +  +  VE+ LCN   P H D               K   L+I    GY +  G+Q LA+IYR+ YKV  T    +A     K  T L QT+ E +N+ IP+ I+WS+I LP  W L
Sbjct:   46 RTLRVKNLQEITMRDVENELCNWDIPKHLD--------------RKYNYLHIGFVQGYDMDPGSQNLAIIYRVSYKVMNTVCP-KAKDLDSKGETTLCQTNLEKSNVAIPKMIKWSDITLPEKWIL 156

The following BLAST results are available for this feature:

BLAST of MDP0000580739 vs. NCBI nr
BLAST of MDP0000580739 vs. ExPASy Swiss-Prot
BLAST of MDP0000580739 vs. ExPASy TrEMBL
BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
BLAST of MDP0000580739 vs. GDR

BLAST of MDP0000580739 vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|317106712\|dbj\|BAJ53211.1\|	3.787e-69	31.09	JHL23C09.7 [Jatropha curcas]	[more]
gi\|24461860\|gb\|AAN62347.1\|AF506028_14	3.553e-59	34.50	CTV.20 [Citrus trifoliata]	[more]
gi\|147857929\|emb\|CAN80385.1\|	8.750e-58	28.40	hypothetical protein VITISV_039771 [Vitis vinifera...	[more]
gi\|147846463\|emb\|CAN81666.1\|	9.055e-55	28.85	hypothetical protein VITISV_023751 [Vitis vinifera...	[more]
gi\|147820415\|emb\|CAN60041.1\|	2.635e-54	26.14	hypothetical protein VITISV_008274 [Vitis vinifera...	[more]
gi\|147833383\|emb\|CAN66235.1\|	3.441e-54	30.23	hypothetical protein VITISV_023373 [Vitis vinifera...	[more]
gi\|242071789\|ref\|XP_002451171.1\|	1.308e-53	28.98	hypothetical protein SORBIDRAFT_05g025330 [Sorghum...	[more]
gi\|242068045\|ref\|XP_002449299.1\|	1.308e-53	29.09	hypothetical protein SORBIDRAFT_05g007360 [Sorghum...	[more]
gi\|242068605\|ref\|XP_002449579.1\|	2.913e-53	29.27	hypothetical protein SORBIDRAFT_05g019550 [Sorghum...	[more]
gi\|147864932\|emb\|CAN83629.1\|	3.561e-51	29.20	hypothetical protein VITISV_031958 [Vitis vinifera...	[more]

Pages

BLAST of MDP0000580739 vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot)
Total hits: 3


Match Name	E-value	Identity	Description
POLG_PVCV2	9.086e-11	23.86	Genome polyprotein OS=Petunia vein clearing virus ...	[more]
POLG_PVCV1	4.510e-10	23.51	Genome polyprotein OS=Petunia vein clearing virus ...	[more]
POL_RTBVP	1.111e-8	25.27	Polyprotein P3 OS=Rice tungro bacilliform virus (i...	[more]

BLAST of MDP0000580739 vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
E6NUA1_9ROSI	4.119e-69	31.09	JHL23C09.7 protein OS=Jatropha curcas GN=JHL23C09....	[more]
Q8H6Q8_PONTR	3.865e-59	34.50	CTV.20 OS=Poncirus trifoliata GN=CTV.20 PE=4 SV=1	[more]
A5ARS0_VITVI	9.519e-58	28.40	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BZZ9_VITVI	9.850e-55	28.85	Putative uncharacterized protein OS=Vitis vinifera...	[more]
A5BD41_VITVI	2.866e-54	26.14	Putative uncharacterized protein (Fragment) OS=Vit...	[more]
A5C143_VITVI	3.743e-54	30.23	Putative uncharacterized protein OS=Vitis vinifera...	[more]
C5Y875_SORBI	1.422e-53	29.09	Putative uncharacterized protein Sb05g007360 OS=So...	[more]
C5Y6X7_SORBI	1.422e-53	28.98	Putative uncharacterized protein Sb05g025330 OS=So...	[more]
C5Y391_SORBI	3.169e-53	29.27	Putative uncharacterized protein Sb05g019550 OS=So...	[more]
A5BVS5_VITVI	3.873e-51	29.20	Putative uncharacterized protein OS=Vitis vinifera...	[more]

Pages

BLAST of MDP0000580739 vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0)
Total hits: 25


Match Name	E-value	Identity
POPTR_0005s18930.1	6.958e-68	33.82	[more]
POPTR_0011s03170.1	2.100e-56	32.24	[more]
POPTR_0002s22830.1	7.729e-51	35.90	[more]
POPTR_0010s00240.1	1.237e-40	45.65	[more]
POPTR_0005s17220.1	4.864e-37	39.81	[more]
POPTR_0001s20540.1	3.152e-36	46.30	[more]
POPTR_0008s21810.1	4.117e-36	27.08	[more]
POPTR_0011s09490.1	1.324e-34	48.28	[more]
POPTR_0003s02870.1	2.585e-30	27.25	[more]
POPTR_0004s21010.1	1.016e-26	44.83	[more]

Pages

BLAST of MDP0000580739 vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0)
Total hits: 3


Match Name	E-value	Identity
ppa021024m	5.427e-43	40.50	[more]
ppa016797m	1.529e-37	37.00	[more]
ppb016318m	3.926e-9	34.92	[more]

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001022	Tobamoviral movement protein	PFAM	PF01107	MP	coord: 42..200 score: 3.1
None	No IPR available	SEG	seg	seg	coord: 56..68 score
None	No IPR available	SEG	seg	seg	coord: 4..16 score
None	No IPR available	SEG	seg	seg	coord: 3..12 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr5:22273061..22274930-
mRNA from alignment at MDC016957.218:124..1993-
coding sequence from alignment at MDC016957.218:124..1993-

mRNA sequence

>MDP0000580739 ID=MDP0000580739; Name=MDP0000580739; organism=Malus x domestica; type=mRNA; length=1870bp
ATGGCCAGCACTAGCTCTAGATCAAATYTAGGAACTATACCTGATATTGT
YAATGAAGAACAAAAATTTGAATTTCAAACAGACAGTAGTCTAGATTTTG
CTGAATGGAATATTCCAAAAATATCTTCAAAAAATATTTATAAAAAGAAA
TGGGCATTCGCCTCTTTTAAAACRGAACACCATGTCAAAACRGTTGAACA
AGCTTATGCTCTTAGTAAAGATCATGAGACTTGCCAATTGTTTACCCCAG
AACAAATTAATTCYCATAGGAAAGATGGTCATAATTATATTCATATWGGT
TTAGTGCAAATTGCAGCCAAACCATTRACACGTAGAGGTCTTAATACCTC
TATMCTCTTATGTCTCCGAGATGCTAGATTCAYTGACTTCAGTGATAGTA
TACTTGGTATGGTTGAATCCAGCCTCTGTAATGGACCTATCCAYTTTGAC
TGCTTYCCAGATCTTACCATAAGTCTGTCYGACCCACAYATGYTAAAAGC
ACTTACACTAAATATCAAAACTTCAGGATAYAAAGTYCTAGAAGGAACAC
AGCCTTTGGCYTTRATTTATAGAATYTATTATAARGTYACTGGCACWAAT
ATGAACTTTCAGGCTTTAACCAAAAGTCCGAAGGATCATACTCTCTTGAT
CCAGACTGATCAAGAGAATGCCAATATTAAAATACCYCGAACCATTAGGT
GGTCAGAAATCAATCTCCCTTCAGATTGGTGTCTRATAAACGAGAGTCGG
CCAGTAGCCATYCAAAATAGTCTAGTYAATTTAGACAAYGTAGAACAATA
CTTTGAYGGTACGGTTAAAATYAATTTTGATCGTCCTGCTAGAAAATCCT
GTGATTCTAATCGATCACTTAAATCCTTTACTTCCAATAGGAATTCTTTC
TCTGGATCTATGCCAACCGATAGGCAAGGTCGAGACCAAGAATTAATCAA
TTCCCTRGCTAATAGGAAATTAAAATCAGTAGATAYAGGCTCATCTGTCA
CCCAACAAGAATTAATAAATGACCTTTTAAATTTCAAACTCCAATCACTT
GAGACAAACGCTCAAGTAGTCCAGCCTACCTATCATRCCCCATCCATTCC
TCCTAAGGAAGAACAAACATCCCCAACTGCTTCTGATTTTGATGCRGAAC
CAGTWCACCACCAACTATTGGTTTTAACCAGRCAAGAACCTTTTARGTAT
GATCGTAAGAAACTCTGTAGAGACATCGAAGCCTTAGAAAATGTCCCTCG
ACGAAACATCTTCAGAAGTAAATATACTACTGAAGAGAAATTAGAAATCC
ATAAGGCATGGAAAGACTTCATGCARACCAAYAGACTTGAAATMTTTTTC
TTCGACTTCGTAGAAAAACATTATGAGWCTGAAAACCAAGTAAAGGTAAT
CACCAAAGAAAATTGGGTTAAAGAAGACAAGACAGTTGTCTCCTCCAGTC
ACCCTCCACAAGAAACTATACTTATTAGTACTGCGAATACGCAGGTCCCA
GCCTCACCGTTCAAACTTCCGAAGGAAGAWGCAGGTGTCAAACCTGTTAT
TGAACAAAACAATTTTACCAACCAAAGCCTACATATCATAGGAAAACAGT
TGGATAAAATCGAAACCAAGGTTGACAATTTGTCAAWTAAACCACTTAGT
AAAGAAATACCTTTAACTAGTTTYAGAGAGTCACCCTCTTTAAAAACYTC
AACATCTATTAAGATAGAACAAATGCTTCATAAGCTAGAAAAGGACAAAT
CAGTTCGTGTGATTAATAACCCACATGATTTTGAAACACCTTCCTCAATT
CCAGATTCAGAAGATGAAAGTATTGATTCCATCATTCAAATGGAGCAAGC
CTTTCAGAGTCTTGAATTAA

protein sequence of MDP0000580739

>MDP0000580739 ID=MDP0000580739; Name=MDP0000580739; organism=Malus x domestica; type=polypeptide; length=608bp
MASTSSRSNXGTIPDIVNEEQKFEFQTDSSLDFAEWNIPKISSKNIYKKK
WAFASFKTEHHVKTVEQAYALSKDHETCQLFTPEQINSHRKDGHNYIHXG
LVQIAAKPLTRRGLNTSILLCLRDARFXDFSDSILGMVESSLCNGPIHFD
CFPDLTISLSDPHMXKALTLNIKTSGYKVLEGTQPLALIYRIYYKVTGTN
MNFQALTKSPKDHTLLIQTDQENANIKIPRTIRWSEINLPSDWCLINESR
PVAIQNSLVNLDNVEQYFDGTVKINFDRPARKSCDSNRSLKSFTSNRNSF
SGSMPTDRQGRDQELINSLANRKLKSVDXGSSVTQQELINDLLNFKLQSL
ETNAQVVQPTYHXPSIPPKEEQTSPTASDFDAEPVHHQLLVLTRQEPFXY
DRKKLCRDIEALENVPRRNIFRSKYTTEEKLEIHKAWKDFMQTNRLEIFF
FDFVEKHYEXENQVKVITKENWVKEDKTVVSSSHPPQETILISTANTQVP
ASPFKLPKEXAGVKPVIEQNNFTNQSLHIIGKQLDKIETKVDNLSXKPLS
KEIPLTSFRESPSLKTSTSIKIEQMLHKLEKDKSVRIQKMKVLIPSFKWS
KPFRVLN*

mRNA from alignment at chr5:22273061..22274930-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000580739 ID=MDP0000580739; Name=MDP0000580739; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr5:22273061..22274930- (Malus x domestica

mRNA from alignment at MDC016957.218:124..1993-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000580739 ID=MDP0000580739; Name=MDP0000580739; organism=Malus x domestica; type=mRNA; length=1870bp; location=Sequence derived from: MDC016957.218:124..1993- (Malus x domestica
ATGGCCAGCACTAGCTCTAGATCAAATYTAGGAACTATACCTGATATTGT
YAATGAAGAACAAAAATTTGAATTTCAAACAGACAGTAGTCTAGATTTTG
CTGAATGGAATATTCCAAAAATATCTTCAAAAAATATTTATAAAAAGAAA
TGGGCATTCGCCTCTTTTAAAACRGAACACCATGTCAAAACRGTTGAACA
AGCTTATGCTCTTAGTAAAGATCATGAGACTTGCCAATTGTTTACCCCAG
AACAAATTAATTCYCATAGGAAAGATGGTCATAATTATATTCATATWGGT
TTAGTGCAAATTGCAGCCAAACCATTRACACGTAGAGGTCTTAATACCTC
TATMCTCTTATGTCTCCGAGATGCTAGATTCAYTGACTTCAGTGATAGTA
TACTTGGTATGGTTGAATCCAGCCTCTGTAATGGACCTATCCAYTTTGAC
TGCTTYCCAGATCTTACCATAAGTCTGTCYGACCCACAYATGYTAAAAGC
ACTTACACTAAATATCAAAACTTCAGGATAYAAAGTYCTAGAAGGAACAC
AGCCTTTGGCYTTRATTTATAGAATYTATTATAARGTYACTGGCACWAAT
ATGAACTTTCAGGCTTTAACCAAAAGTCCGAAGGATCATACTCTCTTGAT
CCAGACTGATCAAGAGAATGCCAATATTAAAATACCYCGAACCATTAGGT
GGTCAGAAATCAATCTCCCTTCAGATTGGTGTCTRATAAACGAGAGTCGG
CCAGTAGCCATYCAAAATAGTCTAGTYAATTTAGACAAYGTAGAACAATA
CTTTGAYGGTACGGTTAAAATYAATTTTGATCGTCCTGCTAGAAAATCCT
GTGATTCTAATCGATCACTTAAATCCTTTACTTCCAATAGGAATTCTTTC
TCTGGATCTATGCCAACCGATAGGCAAGGTCGAGACCAAGAATTAATCAA
TTCCCTRGCTAATAGGAAATTAAAATCAGTAGATAYAGGCTCATCTGTCA
CCCAACAAGAATTAATAAATGACCTTTTAAATTTCAAACTCCAATCACTT
GAGACAAACGCTCAAGTAGTCCAGCCTACCTATCATRCCCCATCCATTCC
TCCTAAGGAAGAACAAACATCCCCAACTGCTTCTGATTTTGATGCRGAAC
CAGTWCACCACCAACTATTGGTTTTAACCAGRCAAGAACCTTTTARGTAT
GATCGTAAGAAACTCTGTAGAGACATCGAAGCCTTAGAAAATGTCCCTCG
ACGAAACATCTTCAGAAGTAAATATACTACTGAAGAGAAATTAGAAATCC
ATAAGGCATGGAAAGACTTCATGCARACCAAYAGACTTGAAATMTTTTTC
TTCGACTTCGTAGAAAAACATTATGAGWCTGAAAACCAAGTAAAGGTAAT
CACCAAAGAAAATTGGGTTAAAGAAGACAAGACAGTTGTCTCCTCCAGTC
ACCCTCCACAAGAAACTATACTTATTAGTACTGCGAATACGCAGGTCCCA
GCCTCACCGTTCAAACTTCCGAAGGAAGAWGCAGGTGTCAAACCTGTTAT
TGAACAAAACAATTTTACCAACCAAAGCCTACATATCATAGGAAAACAGT
TGGATAAAATCGAAACCAAGGTTGACAATTTGTCAAWTAAACCACTTAGT
AAAGAAATACCTTTAACTAGTTTYAGAGAGTCACCCTCTTTAAAAACYTC
AACATCTATTAAGATAGAACAAATGCTTCATAAGCTAGAAAAGGACAAAT
CAGTTCGTGTGATTAATAACCCACATGATTTTGAAACACCTTCCTCAATT
CCAGATTCAGAAGATGAAAGTATTGATTCCATCATTCAAATGGAGCAAGC
CTTTCAGAGTCTTGAATTAA

Coding sequence (CDS) from alignment at MDC016957.218:124..1993-

>MDP0000580739 ID=MDP0000580739; Name=MDP0000580739; organism=Malus x domestica; type=CDS; length=1824bp; location=Sequence derived from: MDC016957.218:124..1993- (Malus x domestica
ATGGCCAGCACTAGCTCTAGATCAAATYTAGGAACTATACCTGATATTGT
YAATGAAGAACAAAAATTTGAATTTCAAACAGACAGTAGTCTAGATTTTG
CTGAATGGAATATTCCAAAAATATCTTCAAAAAATATTTATAAAAAGAAA
TGGGCATTCGCCTCTTTTAAAACRGAACACCATGTCAAAACRGTTGAACA
AGCTTATGCTCTTAGTAAAGATCATGAGACTTGCCAATTGTTTACCCCAG
AACAAATTAATTCYCATAGGAAAGATGGTCATAATTATATTCATATWGGT
TTAGTGCAAATTGCAGCCAAACCATTRACACGTAGAGGTCTTAATACCTC
TATMCTCTTATGTCTCCGAGATGCTAGATTCAYTGACTTCAGTGATAGTA
TACTTGGTATGGTTGAATCCAGCCTCTGTAATGGACCTATCCAYTTTGAC
TGCTTYCCAGATCTTACCATAAGTCTGTCYGACCCACAYATGYTAAAAGC
ACTTACACTAAATATCAAAACTTCAGGATAYAAAGTYCTAGAAGGAACAC
AGCCTTTGGCYTTRATTTATAGAATYTATTATAARGTYACTGGCACWAAT
ATGAACTTTCAGGCTTTAACCAAAAGTCCGAAGGATCATACTCTCTTGAT
CCAGACTGATCAAGAGAATGCCAATATTAAAATACCYCGAACCATTAGGT
GGTCAGAAATCAATCTCCCTTCAGATTGGTGTCTRATAAACGAGAGTCGG
CCAGTAGCCATYCAAAATAGTCTAGTYAATTTAGACAAYGTAGAACAATA
CTTTGAYGGTACGGTTAAAATYAATTTTGATCGTCCTGCTAGAAAATCCT
GTGATTCTAATCGATCACTTAAATCCTTTACTTCCAATAGGAATTCTTTC
TCTGGATCTATGCCAACCGATAGGCAAGGTCGAGACCAAGAATTAATCAA
TTCCCTRGCTAATAGGAAATTAAAATCAGTAGATAYAGGCTCATCTGTCA
CCCAACAAGAATTAATAAATGACCTTTTAAATTTCAAACTCCAATCACTT
GAGACAAACGCTCAAGTAGTCCAGCCTACCTATCATRCCCCATCCATTCC
TCCTAAGGAAGAACAAACATCCCCAACTGCTTCTGATTTTGATGCRGAAC
CAGTWCACCACCAACTATTGGTTTTAACCAGRCAAGAACCTTTTARGTAT
GATCGTAAGAAACTCTGTAGAGACATCGAAGCCTTAGAAAATGTCCCTCG
ACGAAACATCTTCAGAAGTAAATATACTACTGAAGAGAAATTAGAAATCC
ATAAGGCATGGAAAGACTTCATGCARACCAAYAGACTTGAAATMTTTTTC
TTCGACTTCGTAGAAAAACATTATGAGWCTGAAAACCAAGTAAAGGTAAT
CACCAAAGAAAATTGGGTTAAAGAAGACAAGACAGTTGTCTCCTCCAGTC
ACCCTCCACAAGAAACTATACTTATTAGTACTGCGAATACGCAGGTCCCA
GCCTCACCGTTCAAACTTCCGAAGGAAGAWGCAGGTGTCAAACCTGTTAT
TGAACAAAACAATTTTACCAACCAAAGCCTACATATCATAGGAAAACAGT
TGGATAAAATCGAAACCAAGGTTGACAATTTGTCAAWTAAACCACTTAGT
AAAGAAATACCTTTAACTAGTTTYAGAGAGTCACCCTCTTTAAAAACYTC
AACATCTATTAAGATAGAACAAATGCTTCATAAGCTAGAAAAGGACAAAT
CAGTTCGTATTCAGAAGATGAAAGTATTGATTCCATCATTCAAATGGAGC
AAGCCTTTCAGAGTCTTGAATTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001022	Tobamoviral movement protein

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport