MDP0000742771, MDP0000742771 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000742771
Unique Name	MDP0000742771
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	8315

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr17	chromosome	chr17:3723701..3732015 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC001594.206	contig	MDC001594.206:2825..11139 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23
KEGG/KAAS of Malus x domestica Whole Genome v1.0	2012-04-02

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000742771_exon_1	MDP0000742771_exon_1	Malus x domestica	CDS
MDP0000742771_exon_2	MDP0000742771_exon_2	Malus x domestica	CDS
MDP0000742771_exon_3	MDP0000742771_exon_3	Malus x domestica	CDS
MDP0000742771_exon_4	MDP0000742771_exon_4	Malus x domestica	CDS
MDP0000742771_exon_5	MDP0000742771_exon_5	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000742771	MDP0000742771	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 107..154 score: 4e-15coord: 160..205 score: 3.5
IPR001005	SANT/Myb domain	SMART	SM00717	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-bin	coord: 106..156 score: 4e-14coord: 159..207 score: 1.2
IPR009057	Homeodomain-like	GENE3D	1.10.10.60	no description	coord: 98..162 score: 1.5e-25coord: 163..206 score: 1.2
IPR009057	Homeodomain-like	SUPERFAMILY	46689	Homeodomain-like	coord: 107..206 score: 1.8
IPR015495	Myb transcription factor	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 94..344 score: 7.4
IPR017930	Myb domain, DNA-binding	PROFILE	PS51294	HTH_MYB	coord: 155..209 score: 25.891coord: 102..154 score: 18
None	No IPR available	SEG	seg	seg	coord: 263..277 score: NAcoord: 287..294 score: NAcoord: 328..340 score: NAcoord: 432..455 score
None	No IPR available	SEG	seg	seg	coord: 20..30 score
None	No IPR available	SEG	seg	seg	coord: 5..18 score
None	No IPR available	SEG	seg	seg	coord: 20..38 score
None	No IPR available	SEG	seg	seg	coord: 13..30 score: NAcoord: 64..87 score
None	No IPR available	SEG	seg	seg	coord: 14..30 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:3723701..3732015-
mRNA from alignment at MDC001594.206:2825..11139-
coding sequence from alignment at MDC001594.206:2825..11139-

mRNA sequence

>MDP0000742771 ID=MDP0000742771; Name=MDP0000742771; organism=Malus x domestica; type=mRNA; length=8315bp
ATGGGAAGTGTAATTTTGGATCCAAATATCGATGAAATTTGTTATCTAAC
TATAAATGGAGAGCCTTTCATGTTCAACCTTMGCACAAAAATTTCGTCAA
GAATGGATGACAAGATTATTAAGGAGGAATTTACTCGTACYGCTTCCCAT
ATGTGCTGACTTGCTGGCCGACGCCAGTTCCTAGATTACCACAACACATA
TAGAGGAGGAGGAAGGTAATTTGCACGCAGCAAAATGTGAGAAGATTTAT
CTAATAGTGGCAGCAACAAGTTAAATTTAATCTTGTGTTTAATCCGTTTA
TTAATCAAATCTTTTTTTTTTTTTTGAAGGGTTTATAAAAGATAATCGGA
TGAGCAGTACTATTTGGTGGCTTCATGTTTTGCTTGATACAAATTCAATT
GCTTTTCTTGATTATGTCTGAAAGTTGAAACTGGTATTTAGTTTCAAGGT
TTTTGATTGTTTGCATTACAAGGYCAATATTTTAGTTTCATGGTATACTC
TGTGTTTTAATTGTATTTGGATTAATTCTAGCTGGAATATCTCGGTTTTG
GTCTCCTTATGTAGCTCCAAAACAACTACATTTTTATTTATTTTTGCTTG
TGATGCGAGTATCCCAATACAACCAGTCACATAGTGACCAATTATATTCT
CTTTAAAAACAATTAATATTATTCTTTTTTCTTGTGATGCAAGCTTTTTA
TTTTTTATACTTACTAATATTATTGTTTATAATTTACACGACAGCAATTG
TTAGGAGRGGGTTCTAATGACAGGTGTTGACATTCAATTGGTGCGCTGAC
TGATCAGCACCCAAGTATTGTTAGTGTGGTGACGAGTCAATACTCAATAC
CTAGTATTGTCGTTTTTACTACGACATTTGTTTCTTTTTTTCTTTTGTTT
TTAATTTTTAATCACACTTTTTGATTCATTTGAAATTCACATCTTCAWTG
TAACCCAAGAAACAGATATATCTTTTACCTACAAAATGACACAAATCAAA
TAAGTGGTGTCAAAACTCGCCTAGTTACAAAGACGGAGCATTTTGGTACA
TATTTACATTGAYTTGGAATCGGCYTAAAACATTTACAAGTGAGCAAATA
AACAAGATTTCAGGCTTGTTTGAGATTTTTTGTTTAGGAAATATTTTTGC
TCATAATAAAAGTTTTTGCTAGAAGTGTTTTTATTAAAAACACTTTGAAA
CTTTTATTGAAAACTTAGGTTAAAAAAAAAAAAGACTTGAAAGTCATAAA
GAAGCACATGTCAAATTGTTATCCRGAAAGCATTTCTATGACCTAGAAGA
AACACTCATAAGGTTTATGTCAAAAACATACAGAAGTGCTTTTAGTATTT
TTAACTCTTTCAAGAATTGGTTAGGATCTTGAAATACCYATTTTTTGACA
TACATTTTTATAGGGYCCACTATATAATTTTTTTGAACGGTCCAAACTTT
TTATCTTTTAAGTCTTCCATAAAAAATCATATCTACCAAAAATCTAAATC
ATATGACCGTTAGATTAAATGGTAGTCATTTTAGTGTTTCTTTGTGAAAC
TGTATTCAYCTATTTTCTTCACTCTAAATGAATGTCTCAATAGTTTTGGT
TTTGTCTAAKTTTTTGTAAGTATGATTTATAAATGACGGCTTGAAATATA
GACAGTTCATATCGTTGAAAAAAGTTATGAAATGATCCCTAAAAAGTGTG
TAAAAAAGAGTGTGTCGTGCGGTCCAAACCCTTCAAAAATAGTCTCRAAC
ACGTGGCTACATGTTATAAGTCCTATCCATGGTGTGAATGGACCATATGC
TCGTAACCGTTGTTTTCGTATATCTCTGTATAATTTTACTACATATACAC
AAGTTTTTGAACTGTTATTAACACTTTAAAATAATCATGGTAAACTCGCA
CYGAGTGTATAACAAACTGATATTGCAATKCTGAATAATATTTTTGAGAC
AAACTTCTTTTCATCTTTTGTTTTGATGTGCCAWTATATATGCACGTTGA
GGTATGATACTTTGACAAGTGTAAAATGGGACTCAATTTAAGGAGAAATT
ATTCAGTGTGCCAGGAACAACTATAGTACACAAAGTGTCAGGATACAAAT
GCTTGAAAWTTTYTTTTTTCAAATWTYCAATAACTTATATTATAACATTT
GGTGTATCAAATCGRTGCATTCTCAWATTTAAGAGGGTCATAAAGAACTT
GTTGGACCATATACAATGGCTAGAGCTGGCAGTCATCAAGTAGAATTTAA
GATGGTGTCCCCAATTGTCCTCTTTTCCTTCCCCACCCCAGCCAGTATCA
TATTTTACTTCACATTTTTCTGCTTCTGTAGTTTTGCACTTCCACGCCAC
ACACAAACAAGTATTTTAATTATAAGGGTTTCTCTATTTTAGCCCCTCCA
TGGGACCCCTTTTTTGTCTTTTCATGCTTTACATATCATTCAAGATATTA
ACCCCACGGAGCCGTAGAGCCCATCTCAATAAATTAGTTTAGTCCTGCTT
TGTTCTCGAATTACCAAGCTGCCCTCTGAGATTCCTTTGCTTTCAAATTT
GTATTTGTTAATTAATTTACAGCAGGAGCAGCCTCTACAGGTCTCCATCA
CCGTTCACCACCTTCGAGTGTACCTCTTTCGGCAGGGCAACTTTTGGACC
TGGTTCAGTAATGGCTTCGGACCCACTGACCCACACCACTGTTTATCTTT
GAAAATTTTACTTTCTTATATGCAATACCAAATTTTAAATATAAGCAGTG
TTATTTAAATTCTCGTAACGATGTTGTAGTTGTTCATTTTTTTGTCAATT
ACAGTTTCACGTATATTGTTTAGTGTGATCAAATTATGGGTGTATAAGAA
GAAGAAGAAGAAGAAGAAGAAAATTAGGTACAAGAGTACTTTGAGCTACA
ATAATTAAGCGATTGATCTATGCATTGCTAATTAAGGTGCTAGATCCATA
TGTAGGAGAGGGACTACAGATTCATGAAGTCGAATGTGACACTTATGAAA
GCATTATAAAGRCACTTTATCCCCCGTTTTAATAGCAACAAGGACTTGGC
TTAACTAGGTACCCTAACTAGCTAGGGCAAGAGATATATGCATGTTGCTA
GTGTTATTCCAAGATCAGCTATAAGCTGACCCAATTGTGCAAACTTCCAT
GCTAGGCTAGTTCGAGCATGGTGTGACTTGAATGAGTTGAGGGGTTCCAT
GTGGATACCCTAACCAATTAAGTTAACTTCACTGAGGATGGCTAGTTAGT
TTGCATCATTACATATGAGTTAATTTATTTATCTTAGCAGCAACAACAAC
AACAAAGTATTATTCAACTAAGTGGGGTCATCTGTATAAATCTTAGAACA
CCAATGCACTAGGTTTTGACCCAAGTCTTTCGTTCGCTTCAAGTGCTCCA
TGTCTTTTCTTAAAGTTGCTTAGCAACTAGAGAGAAATTTMAGTAGGCTT
ATCTAACCAGGATAACTTTCACACTGAATGAGACTAGCTAGCATGAGGAT
AAGTGTGATTGAGTTACAAAAGATCTCATGTATGAGAAATTGCTTAGAAA
TGACGTGATCGGATAACCCACTCAAGTTTTTCTCTTGTAGTAGAGGAAAA
AAGTAAGATTGAAAGTTGTGAATTGATTWTTTTTTTTTTGTTACTAATAT
TATGCACCCACCAAGCAATACTAATGGTGACTAGGTCACACTTAAATAAG
ACGTGGACCACTGGTCTGTGCTTATGCTTACATTAAATCTTTACCTCTTT
TAGTGTTGAAACCCAAAGCAGATTTGAGCAGATTCTGAAATTCTAGGAGT
AGCATTTTGTGTAGAATAATTACTTGCTAGAGGCGGCCAATGATCTTGTT
CTAGGAGTTATATCCAGTTGCCCCTCTCTGGAGAATGGCTTCAATTAATA
TTTGATGGACTGCATAGCATAAATCAATAGGATTTGTATTGATACATTCA
GCTAGCTAGCTAATCAAATTACCCACAAAAAACAAGGCATTATCTTTGTG
GAAAGYGGGTTGATCATCCTATCCAAGACCTAACGTTTGAAATCCAGACT
GTGTCTTCAATTTATCGAAAAAATATTTCCAATCCTAGGTCTGCATGGAA
GAGAAAGTCTGAGGTGTTATTTGTATTAGAAATGGATATGTAAATTAGTT
ATGCATGTAGAACTTGGAAGTTTGAGAAATGGAGCATCAATTTAAAATAA
TTTTAGAATTATTGGAACTCATCTTAAAGAAAACAAAATTCTTAATATTT
AAGAATAAAATAATCAACTTTAAACAAATCAACCAATGACATTTAATATT
TAAAAAAAAATGAAAATACTTGTGTCTGCTTCACGGTTGCGCATGCTTCT
ACATCCCTTTGTGTACAACAATTTAAATATTTCTCTTTATTTATAAATGA
GACTTTTTTAAGTTCGAATATCATAAATCTCTTGCCATGTCATTAAAAAT
CAGAATTGTTCAGTGGACACTACAACAAAATGTAAATTCTTATTGAAATC
ATTGATTTATGAGATAGAATTGGTGACCAATCAAGAAAAAAAAGGGTCAC
CCTAAGTCACTAATGCCTCACATTTTGCAAGGATCGGGGGAAAAATRAGC
GTCTTTTGTACACAGYCTTATTCTTACTTTACAAAAATGTTGTTTCCATG
ACTCGAACCTATAATCAATATCTATTTAAATTAATTTTATAGAATGGATC
TTTACATTGGTGACTAATGAAAAATAAATAATCAAATTGAAGATTTAATT
ATCCATATGTATGAGATAAGTGGACACTACATCAAAATTTAAATTCTTGT
CGAAGTCATTGATTTATGAGATCGATTAATTAATTAATTTTTTTATAGAA
TAATCTTTATATGATCATTAAAAAATATATTTATTTAAGAAAATATTTGC
TAAGGAGTTACTCTCACTTTTTTCAAAAGTAAAAGTCAAGAAGAAGAAGA
AAATAAGTGAAGAACATTGAGCATCAATATTTTGAAATTTAAGTAACTTA
GTATTACGATTTAATGATATTCATTTTCATTTGTAAGTGAGAGATTTTAT
GTTCGATTCTCGTTAAAGGTAAATTTGAACCACATTATTACTTGCTCATT
GTGAGGCTTAGCGAACTCTCGATCCCCTTTAGTGGAGATAATATCATTTG
TTAATATATATATATATATATATTGTCACACGATAGATTTTGTTAAATTA
AATGTTATATTAGTCATCGACGAGATTTATCCACGTCGTCATGTAAGAAC
TCAACTCTTGTCCACACCACTATGAAGGGTCCCTTGTAAAAAAAAATAAA
TACATATTTTGGAATTTAATAGGTTTGTTGATTAATCGATAACTATTCTC
GTCATAAATGGGTCTACTGCAAAATCTGCAGGAAATGGGGAATGCATATT
GCAAGACTGTGACATACATGTCAAAGTTATATATAAATTAGTGGACCATA
AAATTTCATGGAAAAGAAAGAAGGTGTAAAGAAAAACAAATCATCTTGAA
AACGAGGACTGATCCTATATGCAATTATTCTTGATAATATCTGCTAAAGA
GATCCTGCCCTTAAAATTTTTAAGTTGAAAGACGATATGATAAAGATAAA
CCATTAATAAACTTTCCTGATAGAGCAAACAATTCTCTTAGCCATTAATA
TAARGCAAATTAAAGAACTTGGCATATTATATACTAGATTTTGAAGTCCG
GAGCTAATGTATTGGGAAATCTGGACCATTCAAGATAGAGAGATTTAAAC
TTTTGGTTTGTGTGAAGTAGGTCAGTGGAATGTACTAATAGATACATGTT
TAGTATTTAAGTACAGATGTCAATGACAAATTCATAGTTTTCTRATTTCA
CATRTGGTAATACGCGTAGTGAAAACTTAAGAAGCGAAATGATTCTCGAA
CTCAAACTTTAGTTAACATGATTTGAATTTATATTTCTTGTAACTAAATA
AACATGTCCAACTCGGATTTACTATAAGAGCACATCCGCTCTAATAAATG
TTTATGTGAATATTTACAAAGTGATAGAAGGTTAAGAGGGTAGTTTTGTC
ATGAGAAATGTACCACACTATTACTCTCTGATCAAAATTTATTTCTTTAT
CCCATTTATGTCGCTGACCTTTCTCATCCCCAATGCATATATACGCCCAT
TTCTTCCCTTTCTCTATTTAATTTCCTCCATCCATATATAATATATCATC
TTCTTTTTCTCTTGCCGAAGGTAAGTCTAGCTGTATAAACAAGAGCAGAA
CCTACTACTTTGCTTTGCGGGTTCAGAATATTCTGATGGGTCGATCACCG
TGCTGTGACAAGGTGGGTTTGAAGAAAGGACCTTGGACTCCAGAAGAAGA
CCAGAAACTCTTGGCTTACATTGAAGAACACGGCCATGGAAGTTGGCGTG
CCCTCCCAACAAAAGCTGGTGAGACTTCCACTTGCATTTCCCCACATATT
ATACTATAAGAATGTATGTAATTACATAACATGTGTAATTTAAGTACTTA
ATTATTTGTTAATTTCACGGTTTAATTAACTAAATGTGTGTAGGTCTTCA
GAGATGTGGAAAAAGCTGTAGGCTTAGATGGACTAACTATCTTCGACCTG
ATATTAAGAGGGGAAAGTTCAGTTTGCAAGAAGAACAAACCATAATTCAA
CTCCATGCCCTATTAGGGAACAGGTAGAGTACAATTGTTTATATTGTCGC
TTAATTTGTTGTTTTTTAAATCAACAATTGTCGTCCCTGCAATTTGAACA
CTGTAACTCCCCTATCAGTGTAGCTAGACCAAATGGTCTTATGCAATTTT
GTTGTTATCAACTGTCTTAGTCTTATTAGTTCTGGACCTCTGGTAGACAT
TGTTACCAAATGTTAATTAGTAGTCTTATTTTTCATGGTTGTTAATCCTT
TCTCTCAAATATGTTCTTATTTTTCTTTACCTTGACAATGTAGAAGCTAG
AATTTGTTAAGAAGTCTCAAGCTAAATTTTTCGACTTTTTAAATGTGAAA
GCCTTGATCTCGCAATTAGTTTTAACCACTCAACTCCGACCTGTCACTTA
TTCACAATTTTGACTTGTGCGACCATTTTCCATAACATGATAATTCACTG
CTGTTCTGAATTCTGAGTCATGAATCTCCTGACTGYGAGTTCATTATTTA
TGGGTCACAATCTTTCAATGAAAATGATCCTCTTCAAATTTTCTTATTGT
GCACACTCCTAATCGTTTCTGGTTTTTTTAAATTCAACTGATCAAAGAAG
AATCAACGAATAAGTAAATAGAATGTTAAATTGCCCATTAAATCAATTTT
TTATATTATAATGCTTACAACAGATAAATGAAATAAAAATACTTATGAGA
TCGATGTAGTTTATGTTGTTTTTATAGTATTTTGGTGCTAATATTTGTCT
TTGATGATCAGGTGGTCGGCCATAGCAACTCACTTGCCAAAGAGAACAGA
CAATGAGATAAAAAACTACTGGAATACGCATCTTAAGAAGAGGCTAGCCA
AAATGGGCATCGACCCCGTCACGCACAAGCCAAAGAACGACGCCCTACTC
YCTAGCGCCGACGGTCACTCCAAGAACGTCTCCAACCTCAGCCACATGGC
TCAGTGGGAGAGCGCTCGGCTCGAAGCCGAGGCTCGCCTCGTCAGAGAAT
CAAAGCTCCGCTCCCACAGCTCCTCATTACTCCATCAGCTCACCACCACA
AACCCCAATACCTATGTTCTGGTGAATTCTTCGTCTTCGGGTTCGACTTC
AGCTCAACTTCAGATTAAGTGGCCGTCATCAAACCCTTCTAATAATAATA
TTGATCTCGAGTCTTCGACATCTACGCTCAATTACAATTCCGATCAGACT
AACGTTAATAACGCATCGTCCTCCGCAGTGGGGTCCGCGATTATGAAGCC
GGCGATGATCGAGTTTGTTGGGTGTTCAGRTTCTTCTGAGACCAAGGAAG
AATGTGGGGATAAAGAAGATTGGAAGTCCCATTTGTCTTTCACTTCATTA
GGGTTAGTTCATGATCATCAGACCATCACAATGTCCATGGACGCTGGGAG
TGCATGGCCTACTGCTACTGATCATCAAGTTGGCTATGTGGCTGCTGACA
TGGCAGCTGCTGATCAAGAAGGGTTCACTAATCTCTTGCTTAACAACTCT
GATGAGGTGCAGAGTTTGTCAGACGGGGATCACGGCGGGGATTCTGATAA
CGGTGGTGGAAGTGGCAGCGGTAGCGGTAGTGACTACTACGAAGATAATA
AGCATTACTGGAATAGTATTCTCAATTTGGTGAACTCTTCCCCCTCAGAA
TCTCCATTGTTTTGA

protein sequence of MDP0000742771

>MDP0000742771 ID=MDP0000742771; Name=MDP0000742771; organism=Malus x domestica; type=polypeptide; length=482bp
MGSVILDPNIDEICYLTINGEPFMFNLXTKISSRMDDKIIKEEFTRTASH
IRSSLYRSPSPFTTFECTSFGRATFGPGSVMASDPLTHTTNILMGRSPCC
DKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPTKAGLQRCGKSCRLRW
TNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNY
WNTHLKKRLAKMGIDPVTHKPKNDALLXSADGHSKNVSNLSHMAQWESAR
LEAEARLVRESKLRSHSSSLLHQLTTTNPNTYVLVNSSSSGSTSAQLQIK
WPSSNPSNNNIDLESSTSTLNYNSDQTNVNNASSSAVGSAIMKPAMIEFV
GCSXSSETKEECGDKEDWKSHLSFTSLGLVHDHQTITMSMDAGSAWPTAT
DHQVGYVAADMAAADQEGFTNLLLNNSDEVQSLSDGDHGGDSDNGGGSGS
GSGSDYYEDNKHYWNSILNLVNSSPSESPLF*

mRNA from alignment at chr17:3723701..3732015-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000742771 ID=MDP0000742771; Name=MDP0000742771; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr17:3723701..3732015- (Malus x domestica

mRNA from alignment at MDC001594.206:2825..11139-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000742771 ID=MDP0000742771; Name=MDP0000742771; organism=Malus x domestica; type=mRNA; length=8315bp; location=Sequence derived from: MDC001594.206:2825..11139- (Malus x domestica
ATGGGAAGTGTAATTTTGGATCCAAATATCGATGAAATTTGTTATCTAAC
TATAAATGGAGAGCCTTTCATGTTCAACCTTMGCACAAAAATTTCGTCAA
GAATGGATGACAAGATTATTAAGGAGGAATTTACTCGTACYGCTTCCCAT
ATGTGCTGACTTGCTGGCCGACGCCAGTTCCTAGATTACCACAACACATA
TAGAGGAGGAGGAAGGTAATTTGCACGCAGCAAAATGTGAGAAGATTTAT
CTAATAGTGGCAGCAACAAGTTAAATTTAATCTTGTGTTTAATCCGTTTA
TTAATCAAATCTTTTTTTTTTTTTTGAAGGGTTTATAAAAGATAATCGGA
TGAGCAGTACTATTTGGTGGCTTCATGTTTTGCTTGATACAAATTCAATT
GCTTTTCTTGATTATGTCTGAAAGTTGAAACTGGTATTTAGTTTCAAGGT
TTTTGATTGTTTGCATTACAAGGYCAATATTTTAGTTTCATGGTATACTC
TGTGTTTTAATTGTATTTGGATTAATTCTAGCTGGAATATCTCGGTTTTG
GTCTCCTTATGTAGCTCCAAAACAACTACATTTTTATTTATTTTTGCTTG
TGATGCGAGTATCCCAATACAACCAGTCACATAGTGACCAATTATATTCT
CTTTAAAAACAATTAATATTATTCTTTTTTCTTGTGATGCAAGCTTTTTA
TTTTTTATACTTACTAATATTATTGTTTATAATTTACACGACAGCAATTG
TTAGGAGRGGGTTCTAATGACAGGTGTTGACATTCAATTGGTGCGCTGAC
TGATCAGCACCCAAGTATTGTTAGTGTGGTGACGAGTCAATACTCAATAC
CTAGTATTGTCGTTTTTACTACGACATTTGTTTCTTTTTTTCTTTTGTTT
TTAATTTTTAATCACACTTTTTGATTCATTTGAAATTCACATCTTCAWTG
TAACCCAAGAAACAGATATATCTTTTACCTACAAAATGACACAAATCAAA
TAAGTGGTGTCAAAACTCGCCTAGTTACAAAGACGGAGCATTTTGGTACA
TATTTACATTGAYTTGGAATCGGCYTAAAACATTTACAAGTGAGCAAATA
AACAAGATTTCAGGCTTGTTTGAGATTTTTTGTTTAGGAAATATTTTTGC
TCATAATAAAAGTTTTTGCTAGAAGTGTTTTTATTAAAAACACTTTGAAA
CTTTTATTGAAAACTTAGGTTAAAAAAAAAAAAGACTTGAAAGTCATAAA
GAAGCACATGTCAAATTGTTATCCRGAAAGCATTTCTATGACCTAGAAGA
AACACTCATAAGGTTTATGTCAAAAACATACAGAAGTGCTTTTAGTATTT
TTAACTCTTTCAAGAATTGGTTAGGATCTTGAAATACCYATTTTTTGACA
TACATTTTTATAGGGYCCACTATATAATTTTTTTGAACGGTCCAAACTTT
TTATCTTTTAAGTCTTCCATAAAAAATCATATCTACCAAAAATCTAAATC
ATATGACCGTTAGATTAAATGGTAGTCATTTTAGTGTTTCTTTGTGAAAC
TGTATTCAYCTATTTTCTTCACTCTAAATGAATGTCTCAATAGTTTTGGT
TTTGTCTAAKTTTTTGTAAGTATGATTTATAAATGACGGCTTGAAATATA
GACAGTTCATATCGTTGAAAAAAGTTATGAAATGATCCCTAAAAAGTGTG
TAAAAAAGAGTGTGTCGTGCGGTCCAAACCCTTCAAAAATAGTCTCRAAC
ACGTGGCTACATGTTATAAGTCCTATCCATGGTGTGAATGGACCATATGC
TCGTAACCGTTGTTTTCGTATATCTCTGTATAATTTTACTACATATACAC
AAGTTTTTGAACTGTTATTAACACTTTAAAATAATCATGGTAAACTCGCA
CYGAGTGTATAACAAACTGATATTGCAATKCTGAATAATATTTTTGAGAC
AAACTTCTTTTCATCTTTTGTTTTGATGTGCCAWTATATATGCACGTTGA
GGTATGATACTTTGACAAGTGTAAAATGGGACTCAATTTAAGGAGAAATT
ATTCAGTGTGCCAGGAACAACTATAGTACACAAAGTGTCAGGATACAAAT
GCTTGAAAWTTTYTTTTTTCAAATWTYCAATAACTTATATTATAACATTT
GGTGTATCAAATCGRTGCATTCTCAWATTTAAGAGGGTCATAAAGAACTT
GTTGGACCATATACAATGGCTAGAGCTGGCAGTCATCAAGTAGAATTTAA
GATGGTGTCCCCAATTGTCCTCTTTTCCTTCCCCACCCCAGCCAGTATCA
TATTTTACTTCACATTTTTCTGCTTCTGTAGTTTTGCACTTCCACGCCAC
ACACAAACAAGTATTTTAATTATAAGGGTTTCTCTATTTTAGCCCCTCCA
TGGGACCCCTTTTTTGTCTTTTCATGCTTTACATATCATTCAAGATATTA
ACCCCACGGAGCCGTAGAGCCCATCTCAATAAATTAGTTTAGTCCTGCTT
TGTTCTCGAATTACCAAGCTGCCCTCTGAGATTCCTTTGCTTTCAAATTT
GTATTTGTTAATTAATTTACAGCAGGAGCAGCCTCTACAGGTCTCCATCA
CCGTTCACCACCTTCGAGTGTACCTCTTTCGGCAGGGCAACTTTTGGACC
TGGTTCAGTAATGGCTTCGGACCCACTGACCCACACCACTGTTTATCTTT
GAAAATTTTACTTTCTTATATGCAATACCAAATTTTAAATATAAGCAGTG
TTATTTAAATTCTCGTAACGATGTTGTAGTTGTTCATTTTTTTGTCAATT
ACAGTTTCACGTATATTGTTTAGTGTGATCAAATTATGGGTGTATAAGAA
GAAGAAGAAGAAGAAGAAGAAAATTAGGTACAAGAGTACTTTGAGCTACA
ATAATTAAGCGATTGATCTATGCATTGCTAATTAAGGTGCTAGATCCATA
TGTAGGAGAGGGACTACAGATTCATGAAGTCGAATGTGACACTTATGAAA
GCATTATAAAGRCACTTTATCCCCCGTTTTAATAGCAACAAGGACTTGGC
TTAACTAGGTACCCTAACTAGCTAGGGCAAGAGATATATGCATGTTGCTA
GTGTTATTCCAAGATCAGCTATAAGCTGACCCAATTGTGCAAACTTCCAT
GCTAGGCTAGTTCGAGCATGGTGTGACTTGAATGAGTTGAGGGGTTCCAT
GTGGATACCCTAACCAATTAAGTTAACTTCACTGAGGATGGCTAGTTAGT
TTGCATCATTACATATGAGTTAATTTATTTATCTTAGCAGCAACAACAAC
AACAAAGTATTATTCAACTAAGTGGGGTCATCTGTATAAATCTTAGAACA
CCAATGCACTAGGTTTTGACCCAAGTCTTTCGTTCGCTTCAAGTGCTCCA
TGTCTTTTCTTAAAGTTGCTTAGCAACTAGAGAGAAATTTMAGTAGGCTT
ATCTAACCAGGATAACTTTCACACTGAATGAGACTAGCTAGCATGAGGAT
AAGTGTGATTGAGTTACAAAAGATCTCATGTATGAGAAATTGCTTAGAAA
TGACGTGATCGGATAACCCACTCAAGTTTTTCTCTTGTAGTAGAGGAAAA
AAGTAAGATTGAAAGTTGTGAATTGATTWTTTTTTTTTTGTTACTAATAT
TATGCACCCACCAAGCAATACTAATGGTGACTAGGTCACACTTAAATAAG
ACGTGGACCACTGGTCTGTGCTTATGCTTACATTAAATCTTTACCTCTTT
TAGTGTTGAAACCCAAAGCAGATTTGAGCAGATTCTGAAATTCTAGGAGT
AGCATTTTGTGTAGAATAATTACTTGCTAGAGGCGGCCAATGATCTTGTT
CTAGGAGTTATATCCAGTTGCCCCTCTCTGGAGAATGGCTTCAATTAATA
TTTGATGGACTGCATAGCATAAATCAATAGGATTTGTATTGATACATTCA
GCTAGCTAGCTAATCAAATTACCCACAAAAAACAAGGCATTATCTTTGTG
GAAAGYGGGTTGATCATCCTATCCAAGACCTAACGTTTGAAATCCAGACT
GTGTCTTCAATTTATCGAAAAAATATTTCCAATCCTAGGTCTGCATGGAA
GAGAAAGTCTGAGGTGTTATTTGTATTAGAAATGGATATGTAAATTAGTT
ATGCATGTAGAACTTGGAAGTTTGAGAAATGGAGCATCAATTTAAAATAA
TTTTAGAATTATTGGAACTCATCTTAAAGAAAACAAAATTCTTAATATTT
AAGAATAAAATAATCAACTTTAAACAAATCAACCAATGACATTTAATATT
TAAAAAAAAATGAAAATACTTGTGTCTGCTTCACGGTTGCGCATGCTTCT
ACATCCCTTTGTGTACAACAATTTAAATATTTCTCTTTATTTATAAATGA
GACTTTTTTAAGTTCGAATATCATAAATCTCTTGCCATGTCATTAAAAAT
CAGAATTGTTCAGTGGACACTACAACAAAATGTAAATTCTTATTGAAATC
ATTGATTTATGAGATAGAATTGGTGACCAATCAAGAAAAAAAAGGGTCAC
CCTAAGTCACTAATGCCTCACATTTTGCAAGGATCGGGGGAAAAATRAGC
GTCTTTTGTACACAGYCTTATTCTTACTTTACAAAAATGTTGTTTCCATG
ACTCGAACCTATAATCAATATCTATTTAAATTAATTTTATAGAATGGATC
TTTACATTGGTGACTAATGAAAAATAAATAATCAAATTGAAGATTTAATT
ATCCATATGTATGAGATAAGTGGACACTACATCAAAATTTAAATTCTTGT
CGAAGTCATTGATTTATGAGATCGATTAATTAATTAATTTTTTTATAGAA
TAATCTTTATATGATCATTAAAAAATATATTTATTTAAGAAAATATTTGC
TAAGGAGTTACTCTCACTTTTTTCAAAAGTAAAAGTCAAGAAGAAGAAGA
AAATAAGTGAAGAACATTGAGCATCAATATTTTGAAATTTAAGTAACTTA
GTATTACGATTTAATGATATTCATTTTCATTTGTAAGTGAGAGATTTTAT
GTTCGATTCTCGTTAAAGGTAAATTTGAACCACATTATTACTTGCTCATT
GTGAGGCTTAGCGAACTCTCGATCCCCTTTAGTGGAGATAATATCATTTG
TTAATATATATATATATATATATTGTCACACGATAGATTTTGTTAAATTA
AATGTTATATTAGTCATCGACGAGATTTATCCACGTCGTCATGTAAGAAC
TCAACTCTTGTCCACACCACTATGAAGGGTCCCTTGTAAAAAAAAATAAA
TACATATTTTGGAATTTAATAGGTTTGTTGATTAATCGATAACTATTCTC
GTCATAAATGGGTCTACTGCAAAATCTGCAGGAAATGGGGAATGCATATT
GCAAGACTGTGACATACATGTCAAAGTTATATATAAATTAGTGGACCATA
AAATTTCATGGAAAAGAAAGAAGGTGTAAAGAAAAACAAATCATCTTGAA
AACGAGGACTGATCCTATATGCAATTATTCTTGATAATATCTGCTAAAGA
GATCCTGCCCTTAAAATTTTTAAGTTGAAAGACGATATGATAAAGATAAA
CCATTAATAAACTTTCCTGATAGAGCAAACAATTCTCTTAGCCATTAATA
TAARGCAAATTAAAGAACTTGGCATATTATATACTAGATTTTGAAGTCCG
GAGCTAATGTATTGGGAAATCTGGACCATTCAAGATAGAGAGATTTAAAC
TTTTGGTTTGTGTGAAGTAGGTCAGTGGAATGTACTAATAGATACATGTT
TAGTATTTAAGTACAGATGTCAATGACAAATTCATAGTTTTCTRATTTCA
CATRTGGTAATACGCGTAGTGAAAACTTAAGAAGCGAAATGATTCTCGAA
CTCAAACTTTAGTTAACATGATTTGAATTTATATTTCTTGTAACTAAATA
AACATGTCCAACTCGGATTTACTATAAGAGCACATCCGCTCTAATAAATG
TTTATGTGAATATTTACAAAGTGATAGAAGGTTAAGAGGGTAGTTTTGTC
ATGAGAAATGTACCACACTATTACTCTCTGATCAAAATTTATTTCTTTAT
CCCATTTATGTCGCTGACCTTTCTCATCCCCAATGCATATATACGCCCAT
TTCTTCCCTTTCTCTATTTAATTTCCTCCATCCATATATAATATATCATC
TTCTTTTTCTCTTGCCGAAGGTAAGTCTAGCTGTATAAACAAGAGCAGAA
CCTACTACTTTGCTTTGCGGGTTCAGAATATTCTGATGGGTCGATCACCG
TGCTGTGACAAGGTGGGTTTGAAGAAAGGACCTTGGACTCCAGAAGAAGA
CCAGAAACTCTTGGCTTACATTGAAGAACACGGCCATGGAAGTTGGCGTG
CCCTCCCAACAAAAGCTGGTGAGACTTCCACTTGCATTTCCCCACATATT
ATACTATAAGAATGTATGTAATTACATAACATGTGTAATTTAAGTACTTA
ATTATTTGTTAATTTCACGGTTTAATTAACTAAATGTGTGTAGGTCTTCA
GAGATGTGGAAAAAGCTGTAGGCTTAGATGGACTAACTATCTTCGACCTG
ATATTAAGAGGGGAAAGTTCAGTTTGCAAGAAGAACAAACCATAATTCAA
CTCCATGCCCTATTAGGGAACAGGTAGAGTACAATTGTTTATATTGTCGC
TTAATTTGTTGTTTTTTAAATCAACAATTGTCGTCCCTGCAATTTGAACA
CTGTAACTCCCCTATCAGTGTAGCTAGACCAAATGGTCTTATGCAATTTT
GTTGTTATCAACTGTCTTAGTCTTATTAGTTCTGGACCTCTGGTAGACAT
TGTTACCAAATGTTAATTAGTAGTCTTATTTTTCATGGTTGTTAATCCTT
TCTCTCAAATATGTTCTTATTTTTCTTTACCTTGACAATGTAGAAGCTAG
AATTTGTTAAGAAGTCTCAAGCTAAATTTTTCGACTTTTTAAATGTGAAA
GCCTTGATCTCGCAATTAGTTTTAACCACTCAACTCCGACCTGTCACTTA
TTCACAATTTTGACTTGTGCGACCATTTTCCATAACATGATAATTCACTG
CTGTTCTGAATTCTGAGTCATGAATCTCCTGACTGYGAGTTCATTATTTA
TGGGTCACAATCTTTCAATGAAAATGATCCTCTTCAAATTTTCTTATTGT
GCACACTCCTAATCGTTTCTGGTTTTTTTAAATTCAACTGATCAAAGAAG
AATCAACGAATAAGTAAATAGAATGTTAAATTGCCCATTAAATCAATTTT
TTATATTATAATGCTTACAACAGATAAATGAAATAAAAATACTTATGAGA
TCGATGTAGTTTATGTTGTTTTTATAGTATTTTGGTGCTAATATTTGTCT
TTGATGATCAGGTGGTCGGCCATAGCAACTCACTTGCCAAAGAGAACAGA
CAATGAGATAAAAAACTACTGGAATACGCATCTTAAGAAGAGGCTAGCCA
AAATGGGCATCGACCCCGTCACGCACAAGCCAAAGAACGACGCCCTACTC
YCTAGCGCCGACGGTCACTCCAAGAACGTCTCCAACCTCAGCCACATGGC
TCAGTGGGAGAGCGCTCGGCTCGAAGCCGAGGCTCGCCTCGTCAGAGAAT
CAAAGCTCCGCTCCCACAGCTCCTCATTACTCCATCAGCTCACCACCACA
AACCCCAATACCTATGTTCTGGTGAATTCTTCGTCTTCGGGTTCGACTTC
AGCTCAACTTCAGATTAAGTGGCCGTCATCAAACCCTTCTAATAATAATA
TTGATCTCGAGTCTTCGACATCTACGCTCAATTACAATTCCGATCAGACT
AACGTTAATAACGCATCGTCCTCCGCAGTGGGGTCCGCGATTATGAAGCC
GGCGATGATCGAGTTTGTTGGGTGTTCAGRTTCTTCTGAGACCAAGGAAG
AATGTGGGGATAAAGAAGATTGGAAGTCCCATTTGTCTTTCACTTCATTA
GGGTTAGTTCATGATCATCAGACCATCACAATGTCCATGGACGCTGGGAG
TGCATGGCCTACTGCTACTGATCATCAAGTTGGCTATGTGGCTGCTGACA
TGGCAGCTGCTGATCAAGAAGGGTTCACTAATCTCTTGCTTAACAACTCT
GATGAGGTGCAGAGTTTGTCAGACGGGGATCACGGCGGGGATTCTGATAA
CGGTGGTGGAAGTGGCAGCGGTAGCGGTAGTGACTACTACGAAGATAATA
AGCATTACTGGAATAGTATTCTCAATTTGGTGAACTCTTCCCCCTCAGAA
TCTCCATTGTTTTGA

Coding sequence (CDS) from alignment at MDC001594.206:2825..11139-

>MDP0000742771 ID=MDP0000742771; Name=MDP0000742771; organism=Malus x domestica; type=CDS; length=1446bp; location=Sequence derived from: MDC001594.206:2825..11139- (Malus x domestica
ATGGGAAGTGTAATTTTGGATCCAAATATCGATGAAATTTGTTATCTAAC
TATAAATGGAGAGCCTTTCATGTTCAACCTTMGCACAAAAATTTCGTCAA
GAATGGATGACAAGATTATTAAGGAGGAATTTACTCGTACYGCTTCCCAT
ATCAGGAGCAGCCTCTACAGGTCTCCATCACCGTTCACCACCTTCGAGTG
TACCTCTTTCGGCAGGGCAACTTTTGGACCTGGTTCAGTAATGGCTTCGG
ACCCACTGACCCACACCACTAATATTCTGATGGGTCGATCACCGTGCTGT
GACAAGGTGGGTTTGAAGAAAGGACCTTGGACTCCAGAAGAAGACCAGAA
ACTCTTGGCTTACATTGAAGAACACGGCCATGGAAGTTGGCGTGCCCTCC
CAACAAAAGCTGGTCTTCAGAGATGTGGAAAAAGCTGTAGGCTTAGATGG
ACTAACTATCTTCGACCTGATATTAAGAGGGGAAAGTTCAGTTTGCAAGA
AGAACAAACCATAATTCAACTCCATGCCCTATTAGGGAACAGGTGGTCGG
CCATAGCAACTCACTTGCCAAAGAGAACAGACAATGAGATAAAAAACTAC
TGGAATACGCATCTTAAGAAGAGGCTAGCCAAAATGGGCATCGACCCCGT
CACGCACAAGCCAAAGAACGACGCCCTACTCYCTAGCGCCGACGGTCACT
CCAAGAACGTCTCCAACCTCAGCCACATGGCTCAGTGGGAGAGCGCTCGG
CTCGAAGCCGAGGCTCGCCTCGTCAGAGAATCAAAGCTCCGCTCCCACAG
CTCCTCATTACTCCATCAGCTCACCACCACAAACCCCAATACCTATGTTC
TGGTGAATTCTTCGTCTTCGGGTTCGACTTCAGCTCAACTTCAGATTAAG
TGGCCGTCATCAAACCCTTCTAATAATAATATTGATCTCGAGTCTTCGAC
ATCTACGCTCAATTACAATTCCGATCAGACTAACGTTAATAACGCATCGT
CCTCCGCAGTGGGGTCCGCGATTATGAAGCCGGCGATGATCGAGTTTGTT
GGGTGTTCAGRTTCTTCTGAGACCAAGGAAGAATGTGGGGATAAAGAAGA
TTGGAAGTCCCATTTGTCTTTCACTTCATTAGGGTTAGTTCATGATCATC
AGACCATCACAATGTCCATGGACGCTGGGAGTGCATGGCCTACTGCTACT
GATCATCAAGTTGGCTATGTGGCTGCTGACATGGCAGCTGCTGATCAAGA
AGGGTTCACTAATCTCTTGCTTAACAACTCTGATGAGGTGCAGAGTTTGT
CAGACGGGGATCACGGCGGGGATTCTGATAACGGTGGTGGAAGTGGCAGC
GGTAGCGGTAGTGACTACTACGAAGATAATAAGCATTACTGGAATAGTAT
TCTCAATTTGGTGAACTCTTCCCCCTCAGAATCTCCATTGTTTTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeodomain-like_sf
IPR015495	Myb_TF_plants
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0005515	protein binding