ppa012878m, ppa012878m (mRNA) Prunus persica

Transcript Overview
Nameppa012878m
Unique Nameppa012878m
TypemRNA
OrganismPrunus persica (Peach)
Sequence length767
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
scaffold_2supercontigscaffold_2:16560832..16563268 +Prunus persica Whole Genome v1.0 Assembly & Annotationn/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ppa012878m.gppa012878m.gPrunus persicagene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012878m.five_prime_UTR.1ppa012878m.five_prime_UTR.1Prunus persicafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012878m.CDS.1ppa012878m.CDS.1Prunus persicaCDS
ppa012878m.CDS.2ppa012878m.CDS.2Prunus persicaCDS
ppa012878m.CDS.3ppa012878m.CDS.3Prunus persicaCDS
ppa012878m.CDS.4ppa012878m.CDS.4Prunus persicaCDS
ppa012878m.CDS.5ppa012878m.CDS.5Prunus persicaCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012878m.three_prime_UTR.1ppa012878m.three_prime_UTR.1Prunus persicathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ppa012878mppa012878mPrunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
"Phytozome_pacid17654930"
Homology
[Close]
BLAST of ppa012878m vs. Vitis vinifera
Match: GSVIVT01027637001 (assembled CDS)

HSP 1 Score: 295.434 bits (755), Expect = 6.199e-81
Identity = 145/151 (96.03%), Postives = 151/151 (100.00%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKG+TPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. Vitis vinifera
Match: GSVIVT01018537001 (assembled CDS)

HSP 1 Score: 290.426 bits (742), Expect = 1.994e-79
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPP+WLKIS+QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILR+LK HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL RYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRVLKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLGRYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: B6CBQ9_SOYBN (Ribosomal protein S13 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 1.063e-78
Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKGLTPSQIGV+LRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: A5B3K9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00670 PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.369e-78
Identity = 145/151 (96.03%), Postives = 151/151 (100.00%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKG+TPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: B9RDA6_RICCO (40S ribosomal protein S13, putative OS=Ricinus communis GN=RCOM_1611610 PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 3.094e-78
Identity = 146/151 (96.69%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKRTPPSWLKIS+QDV+ENICKFAKKGL PSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: Q2V995_SOLTU (Cytoplasmic ribosomal protein S13-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 4.040e-78
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKRTPPSWLKIS  DVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: Q9MAV9_PANGI (Cytoplasmic ribosomal protein S13 OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.277e-78
Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKRTPPSWLKI+ QDV++NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: C6T9Q3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.892e-78
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSR KGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKGLTPSQIGV+LRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRDKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: Q3SC82_SOLLC (Cytoplasmic ribosomal protein S13 OS=Solanum lycopersicum GN=ACI39 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.535e-77
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKR PPSWLKIS  DVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRAPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: D7T238_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0022g01590 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.620e-77
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPP+WLKIS+QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILR+LK HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL RYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRVLKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLGRYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: A9NRB2_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 9.952e-77
Identity = 140/151 (92.72%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSK+LRILKAHGLAPEIPEDLYHLIKKAV++RKHLERNRKDKDSKFRLILVESR+HRLARYYK+ KKLPPVWKYES TASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKVLRILKAHGLAPEIPEDLYHLIKKAVAVRKHLERNRKDKDSKFRLILVESRVHRLARYYKRVKKLPPVWKYESATASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy TrEMBL
Match: A9PDV6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_666912 PE=2 SV=1)

HSP 1 Score: 289.656 bits (740), Expect = 1.300e-76
Identity = 142/151 (94.04%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKGISASALPYKRTPPSWLKIS QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES+TASTLVA
Sbjct:    1 MGRMHSHGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS13_SOYBN (40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 3.471e-80
Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKGLTPSQIGV+LRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS132_ARATH (40S ribosomal protein S13-2 OS=Arabidopsis thaliana GN=RPS13B PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 6.127e-77
Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKR+ PSWLK ++QDV+E+ICKFAKKGLTPSQIGV+LRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS13_PEA (40S ribosomal protein S13 OS=Pisum sativum GN=RPS13 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.045e-76
Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGR+HS+GKGIS+SALPY+RT PSWLKIS+QDV+E ICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER RKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRLHSKGKGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS131_ARATH (40S ribosomal protein S13-1 OS=Arabidopsis thaliana GN=RPS13A PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 1.045e-76
Identity = 141/151 (93.38%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKR+ PSWLK + QDV+E+ICKFAKKGLTPSQIGV+LRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS132_ORYSJ (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica GN=Os08g0117300 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 1.462e-70
Identity = 133/151 (88.08%), Postives = 138/151 (91.39%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLK +  DVEE I K AKKG  PSQIGV+LRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS13_MAIZE (40S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 7.254e-70
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MG MHSRGKGIS+SALPYKRTPP+WLK +  DVEE I K AKKG  PSQIGVLLRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA
Sbjct:    1 MGAMHSRGKGISSSALPYKRTPPTWLKTAASDVEEMITKAAKKGQMPSQIGVLLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS131_ORYSJ (40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica GN=Os08g0117200 PE=2 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 7.254e-70
Identity = 131/151 (86.75%), Postives = 138/151 (91.39%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SA+PYKRTPPSW+K +  DVEE I K AKKG  PSQIGV+LRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP WKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS13_XENLA (40S ribosomal protein S13 OS=Xenopus laevis GN=rps13 PE=3 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 7.768e-64
Identity = 115/151 (76.16%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMH+ GKG+S SALPY+R+ P+WLK+++ DV+E I K AKKGLTPSQIGV+LRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK  + LPP WKYES+TAS LVA
Sbjct:    1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTRRVLPPNWKYESSTASALVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS13_RAT (40S ribosomal protein S13 OS=Rattus norvegicus GN=Rps13 PE=2 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 7.768e-64
Identity = 115/151 (76.16%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMH+ GKG+S SALPY+R+ P+WLK+++ DV+E I K AKKGLTPSQIGV+LRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK  + LPP WKYES+TAS LVA
Sbjct:    1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
[Close]
BLAST of ppa012878m vs. ExPASy Swiss-Prot
Match: RS13_MOUSE (40S ribosomal protein S13 OS=Mus musculus GN=Rps13 PE=1 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 7.768e-64
Identity = 115/151 (76.16%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMH+ GKG+S SALPY+R+ P+WLK+++ DV+E I K AKKGLTPSQIGV+LRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK  + LPP WKYES+TAS LVA
Sbjct:    1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
[Close]
BLAST of ppa012878m vs. TAIR10
Match: AT4G00100.1 (| Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosomal protein S13A | chr4:37172-38123 FORWARD LENGTH=151)

HSP 1 Score: 285.804 bits (730), Expect = 7.034e-78
Identity = 141/151 (93.38%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKR+ PSWLK ++QDV+E+ICKFAKKGLTPSQIGV+LRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. TAIR10
Match: AT3G60770.1 (| Symbols: | Ribosomal protein S13/S15 | chr3:22460525-22461656 REVERSE LENGTH=151)

HSP 1 Score: 285.034 bits (728), Expect = 1.200e-77
Identity = 141/151 (93.38%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKR+ PSWLK + QDV+E+ICKFAKKGLTPSQIGV+LRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. Populus trichicarpa v2.0
Match: POPTR_0015s14490.1 ()

HSP 1 Score: 289.656 bits (740), Expect = 5.500e-79
Identity = 142/151 (94.04%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKGISASALPYKRTPPSWLKIS QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES+TASTLVA
Sbjct:    1 MGRMHSHGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012878m vs. Populus trichicarpa v2.0
Match: POPTR_0002s14780.1 ()

HSP 1 Score: 288.886 bits (738), Expect = 9.381e-79
Identity = 141/151 (93.38%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS+GKGISASALPYKRTPPSWLKIS QDV++NICKFAKKGLTPSQIGV+LRDSHGIAQVK+VTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYES+TASTLVA
Sbjct:    1 MGRMHSKGKGISASALPYKRTPPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012878m vs. Populus trichicarpa v2.0
Match: POPTR_0014s06420.1 ()

HSP 1 Score: 287.345 bits (734), Expect = 2.729e-78
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS+GKGISASALPYKRT PSWLKIS QDV++NICKFAKKGLTPSQIGV+LRDSHGIAQVK+VTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSKGKGISASALPYKRTSPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKTVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. Populus trichicarpa v2.0
Match: POPTR_0012s14440.1 ()

HSP 1 Score: 282.337 bits (721), Expect = 8.780e-77
Identity = 139/151 (92.05%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKRT PSWLKIS QDV+++ICKFAKKGLTPSQIGV+LRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKL PVWKYES+TASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTSPSWLKISAQDVDDSICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLAPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012878m vs. GDR
Match: MDP0000288520 (MDP0000288520)

HSP 1 Score: 281.567 bits (719), Expect = 1.981e-76
Identity = 139/140 (99.29%), Postives = 140/140 (100.00%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 420
            MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct:  315 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 454
[Close]
BLAST of ppa012878m vs. GDR
Match: MDP0000517303 (MDP0000517303)

HSP 1 Score: 265.003 bits (676), Expect = 1.919e-71
Identity = 133/139 (95.68%), Postives = 134/139 (96.40%), Query Frame = 1 
Query:    4 GRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 420
            GR     KGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct:   96 GRRVVDTKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 234
[Close]
BLAST of ppa012878m vs. GDR
Match: MDP0000262752 (MDP0000262752)

HSP 1 Score: 230.72 bits (587), Expect = 4.010e-61
Identity = 112/126 (88.89%), Postives = 122/126 (96.83%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLA 378
            MGRMHS GKG+SASALPYKR+ PSWLK++  DVEENICKFAKKG+TPSQIGV+LRDSHGIAQVK+VTGSKILR+LKA+GLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+
Sbjct:    1 MGRMHSHGKGMSASALPYKRSAPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKTVTGSKILRVLKAYGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLS 126
[Close]
BLAST of ppa012878m vs. GDR
Match: MDP0000753788 (MDP0000753788)

HSP 1 Score: 217.238 bits (552), Expect = 4.589e-57
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 1 
Query:   91 QDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 420
            Q VEENICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK
Sbjct:  444 QRVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 553
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|351722010|ref|NP_001237229.1| (40S ribosomal protein S13 [Glycine max] >gi|356514135|ref|XP_003525762.1| PREDICTED: 40S ribosomal protein S13-like [Glycine max] >gi|356514137|ref|XP_003525763.1| PREDICTED: 40S ribosomal protein S13-like [Glycine max] >gi|356563264|ref|XP_003549884.1| PREDICTED: 40S ribosomal protein S13-like [Glycine max] >gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S ribosomal protein S13 >gi|44662862|gb|AAS47510.1| ribosomal protein S13 [Glycine max] >gi|161367348|gb|ABX71080.1| ribosomal protein S13 [Glycine max] >gi|255625887|gb|ACU13288.1| unknown [Glycine max])

HSP 1 Score: 296.59 bits (758), Expect = 9.284e-79
Identity = 147/151 (97.35%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKGLTPSQIGV+LRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|388521223|gb|AFK48673.1| (unknown [Lotus japonicus] >gi|388521665|gb|AFK48894.1| unknown [Lotus japonicus])

HSP 1 Score: 296.204 bits (757), Expect = 1.213e-78
Identity = 146/151 (96.69%), Postives = 151/151 (100.00%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKI++QDVEENICKFAKKGLTPSQIGV+LRDSHGIAQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|225453951|ref|XP_002280012.1| (PREDICTED: 40S ribosomal protein S13 [Vitis vinifera] >gi|147820740|emb|CAN69640.1| hypothetical protein VITISV_028568 [Vitis vinifera] >gi|296089171|emb|CBI38874.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 295.434 bits (755), Expect = 2.068e-78
Identity = 145/151 (96.03%), Postives = 151/151 (100.00%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKG+TPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|255541262|ref|XP_002511695.1| (40S ribosomal protein S13, putative [Ricinus communis] >gi|223548875|gb|EEF50364.1| 40S ribosomal protein S13, putative [Ricinus communis])

HSP 1 Score: 295.049 bits (754), Expect = 2.701e-78
Identity = 146/151 (96.69%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKRTPPSWLKIS+QDV+ENICKFAKKGL PSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|82621170|gb|ABB86273.1| (cytoplasmic ribosomal protein S13-like [Solanum tuberosum])

HSP 1 Score: 294.664 bits (753), Expect = 3.528e-78
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKRTPPSWLKIS  DVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|8131699|dbj|BAA96366.1| (cytoplasmic ribosomal protein S13 [Panax ginseng])

HSP 1 Score: 294.278 bits (752), Expect = 4.608e-78
Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKRTPPSWLKI+ QDV++NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|255636433|gb|ACU18555.1| (unknown [Glycine max])

HSP 1 Score: 293.893 bits (751), Expect = 6.018e-78
Identity = 146/151 (96.69%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSR KGIS+SALPYKRTPPSWLKIS+QDVEENICKFAKKGLTPSQIGV+LRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRDKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012878m vs. NCBI nr
Match: gi|350534834|ref|NP_001234162.1| (cytoplasmic ribosomal protein S13 [Solanum lycopersicum] >gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum])

HSP 1 Score: 292.738 bits (748), Expect = 1.341e-77
Identity = 145/151 (96.03%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGISASALPYKR PPSWLKIS  DVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRAPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
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BLAST of ppa012878m vs. NCBI nr
Match: gi|225455529|ref|XP_002266109.1| (PREDICTED: 40S ribosomal protein S13 [Vitis vinifera] >gi|296084140|emb|CBI24528.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 290.426 bits (742), Expect = 6.653e-77
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPP+WLKIS+QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSKILR+LK HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL RYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRVLKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLGRYYKRTKKLPPVWKYESTTASTLVA 151
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BLAST of ppa012878m vs. NCBI nr
Match: gi|116783993|gb|ABK23173.1| (unknown [Picea sitchensis])

HSP 1 Score: 290.041 bits (741), Expect = 8.690e-77
Identity = 140/151 (92.72%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSRGKGIS+SALPYKRTPPSWLKIS+QDVE+NICKFAKKGLTPSQIGV+LRDSHGIAQVKSVTGSK+LRILKAHGLAPEIPEDLYHLIKKAV++RKHLERNRKDKDSKFRLILVESR+HRLARYYK+ KKLPPVWKYES TASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKVLRILKAHGLAPEIPEDLYHLIKKAVAVRKHLERNRKDKDSKFRLILVESRVHRLARYYKRVKKLPPVWKYESATASTLVA 151
The following BLAST results are available for this feature:
BLAST of ppa012878m vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Vitis vinifera)
Total hits: 2
Match NameE-valueIdentityDescription
GSVIVT010276370016.199e-8196.03assembled CDS[more]
GSVIVT010185370011.994e-7993.38assembled CDS[more]
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BLAST of ppa012878m vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
B6CBQ9_SOYBN1.063e-7897.35Ribosomal protein S13 OS=Glycine max PE=2 SV=1[more]
A5B3K9_VITVI2.369e-7896.03Putative uncharacterized protein OS=Vitis vinifera... [more]
B9RDA6_RICCO3.094e-7896.6940S ribosomal protein S13, putative OS=Ricinus com... [more]
Q2V995_SOLTU4.040e-7896.69Cytoplasmic ribosomal protein S13-like OS=Solanum ... [more]
Q9MAV9_PANGI5.277e-7896.03Cytoplasmic ribosomal protein S13 OS=Panax ginseng... [more]
C6T9Q3_SOYBN6.892e-7896.69Putative uncharacterized protein OS=Glycine max PE... [more]
Q3SC82_SOLLC1.535e-7796.03Cytoplasmic ribosomal protein S13 OS=Solanum lycop... [more]
D7T238_VITVI7.620e-7793.38Putative uncharacterized protein OS=Vitis vinifera... [more]
A9NRB2_PICSI9.952e-7792.72Putative uncharacterized protein OS=Picea sitchens... [more]
A9PDV6_POPTR1.300e-7694.04Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]

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BLAST of ppa012878m vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot)
Total hits: 25
Match NameE-valueIdentityDescription
RS13_SOYBN3.471e-8097.3540S ribosomal protein S13 OS=Glycine max GN=RPS13 ... [more]
RS132_ARATH6.127e-7793.3840S ribosomal protein S13-2 OS=Arabidopsis thalian... [more]
RS13_PEA1.045e-7693.3840S ribosomal protein S13 OS=Pisum sativum GN=RPS1... [more]
RS131_ARATH1.045e-7693.3840S ribosomal protein S13-1 OS=Arabidopsis thalian... [more]
RS132_ORYSJ1.462e-7088.0840S ribosomal protein S13-2 OS=Oryza sativa subsp.... [more]
RS13_MAIZE7.254e-7087.4240S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=... [more]
RS131_ORYSJ7.254e-7086.7540S ribosomal protein S13-1 OS=Oryza sativa subsp.... [more]
RS13_XENLA7.768e-6476.1640S ribosomal protein S13 OS=Xenopus laevis GN=rps... [more]
RS13_RAT7.768e-6476.1640S ribosomal protein S13 OS=Rattus norvegicus GN=... [more]
RS13_MOUSE7.768e-6476.1640S ribosomal protein S13 OS=Mus musculus GN=Rps13... [more]

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BLAST of ppa012878m vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs TAIR 10)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G00100.17.034e-7893.38| Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosom... [more]
AT3G60770.11.200e-7793.38| Symbols: | Ribosomal protein S13/S15 | chr3:224... [more]
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BLAST of ppa012878m vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0)
Total hits: 4
Match NameE-valueIdentityDescription
POPTR_0015s14490.15.500e-7994.04[more]
POPTR_0002s14780.19.381e-7993.38[more]
POPTR_0014s06420.12.729e-7893.38[more]
POPTR_0012s14440.18.780e-7792.05[more]
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BLAST of ppa012878m vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0)
Total hits: 4
Match NameE-valueIdentityDescription
MDP00002885201.981e-7699.29MDP0000288520[more]
MDP00005173031.919e-7195.68MDP0000517303[more]
MDP00002627524.010e-6188.89MDP0000262752[more]
MDP00007537884.589e-5798.18MDP0000753788[more]
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BLAST of ppa012878m vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs NCBI nr )
Total hits: 25
Match NameE-valueIdentityDescription
gi|351722010|ref|NP_001237229.1|9.284e-7997.3540S ribosomal protein S13 [Glycine max] >gi|356514... [more]
gi|388521223|gb|AFK48673.1|1.213e-7896.69unknown [Lotus japonicus] >gi|388521665|gb|AFK4889... [more]
gi|225453951|ref|XP_002280012.1|2.068e-7896.03PREDICTED: 40S ribosomal protein S13 [Vitis vinife... [more]
gi|255541262|ref|XP_002511695.1|2.701e-7896.6940S ribosomal protein S13, putative [Ricinus commu... [more]
gi|82621170|gb|ABB86273.1|3.528e-7896.69cytoplasmic ribosomal protein S13-like [Solanum tu... [more]
gi|8131699|dbj|BAA96366.1|4.608e-7896.03cytoplasmic ribosomal protein S13 [Panax ginseng][more]
gi|255636433|gb|ACU18555.1|6.018e-7896.69unknown [Glycine max][more]
gi|350534834|ref|NP_001234162.1|1.341e-7796.03cytoplasmic ribosomal protein S13 [Solanum lycoper... [more]
gi|225455529|ref|XP_002266109.1|6.653e-7793.38PREDICTED: 40S ribosomal protein S13 [Vitis vinife... [more]
gi|116783993|gb|ABK23173.1|8.690e-7792.72unknown [Picea sitchensis][more]

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InterPro
Analysis Name: InterProScan of Prunus persica Whole Genome v1.0
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 66..148
score: 2.5
IPR000589Ribosomal protein S15PROSITEPS00362RIBOSOMAL_S15coord: 98..128
score
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 65..142
score: 1.5
IPR012606Ribosomal protein S13/S15, N-terminalPFAMPF08069Ribosomal_S13_Ncoord: 1..60
score: 3.3
NoneNo IPR availablePANTHERPTHR11885FAMILY NOT NAMEDcoord: 1..151
score: 6.7e
NoneNo IPR availableSEGsegsegcoord: 13..29
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>ppa012878m ID=ppa012878m; Name=ppa012878m; organism=Prunus persica; type=mRNA; length=767bp
AATTACCTTAGCCACCTCTCTCTTTATTTTAGGGTTTCTCGGCGGGTAAC
ACAGAGAGGCAAAACTAGAGTGACCAGAAACGGCACAGAGACGACAAACC
AGTCGCCATGGGGCGTATGCACAGCAGAGGTAAGGGTATATCGGCTTCAG
CTCTTCCATACAAGAGGACCCCCCCGAGCTGGCTGAAGATCTCTACTCAG
GATGTTGAGGAGAACATCTGCAAGTTTGCCAAGAAAGGTCTAACACCCTC
TCAAATTGGTGTTCTTCTACGTGATTCTCATGGGATTGCTCAGGTGAAGA
GTGTTACTGGAAGCAAGATATTGCGTATACTGAAGGCGCATGGTCTTGCC
CCTGAAATACCTGAGGATTTATACCACCTCATCAAGAAAGCCGTCTCAAT
TAGAAAACATTTGGAAAGGAACAGGAAGGACAAGGATTCTAAATTTAGAC
TGATTTTGGTTGAGAGCAGAATCCATCGCCTTGCTCGTTACTATAAGAAG
ACAAAGAAGCTTCCACCAGTATGGAAATATGAGTCTACCACCGCCAGCAC
CCTTGTGGCATAGGTCGGATATGATCGGCACCAATTCTAGGTGCTCACAT
TGAAAAATCAGGACTAGTTTTTAGTTTGTTACTTGTTTGCTTCAAGTTTG
GAACTTTATGAAAATCTTCATTGTGGAACTCCTTGGTAGTTGATTTTGTT
TGGATTTTCAAGTGCTCACAATTTTTTTTGGGCAGATTTATCTTTAATTT
TTCAATTGGATAATTTG
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protein sequence of ppa012878m

>ppa012878m ID=ppa012878m; Name=ppa012878m; organism=Prunus persica; type=polypeptide; length=152bp
MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQI
GVLLRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRK
HLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLV
A*
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mRNA from alignment at scaffold_2:16560832..16563268+

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ppa012878m ID=ppa012878m; Name=ppa012878m; organism=Prunus persica; type=mRNA; length=2437bp; location=Sequence derived from: scaffold_2:16560832..16563268+ (Prunus persica
AATTACCTTAGCCACCTCTCTCTTTATTTTAGGGTTTCTCGGCGGGTAAC
ACAGAGAGGCAAAACTAGAGTGACCAGAAACGGCACAGAGACGACAAACC
AGTCGCCATGGGGCGTATGCACAGCAGAGGGTTGGTTTTTTCTTGTTATC
TGAACAAGCTCTGTAAATAAGCTCCGTGAATCCTTCTCGCATTCAGTTGA
ATTGTTTGACATTTGACCCATTTTTTGGTGGTTGTATTTTGTGCCCTTTT
TGCAGTAAGGGTATATCGGCTTCAGCTCTTCCATACAAGAGGACCCCCCC
GAGCTGGCTGAAGATCTCTACTCAGGATGTGAGAAACCCGAACTCTAACT
CTTGAATAAGTAATTGGGTTATGTTGTGATTTGTTTGGTAAATGAGAAAT
TTAAGTAAGTTTTGAATATTTTGCTCAATTTCATTCCGCACTTTCGCGAA
AATGAACAAAAAAGAAGAAGCTGTTCTTGCCCATTTGGTATCAGACAGTA
AAGGATCGTTTTTTATCTGGTAATTACGTTTTGTGGGTCTTCTTTAGTCA
ATTAGCAACCGAACAGAGCCTTATTAGTTCACCTCTCTCGGTCTGTCTTT
TATCTTCTGTGAATTGATTGATTTATGAGATGTATAGTGAGAGAAGCAAA
AGACGATCTTTTGATATTTGATTGAGTTTTTCTCTCCTTTTGATTTGGAA
TGATTGGGTTTCTATTCTATGAAGTAACAGATTATTTTAATTTCATTTGG
GCACATCTTTCCTTGCTGTCTACACCAAATGAAAGCTCGAGTCTGATTGT
TGTCTCATACATACTCATGATGTTCTAAGTAGCATCGAGTTTTCGTACTT
ACAAGTCTGTTAATGCCTTGCGATTGTAGTTGGGATCTTTACAATTCTAT
CATTGAAAAACATAATGACTGTTTCTTTTGTTTTGTTCTAGTCGAGTGGT
TTTGGCATTTTAGAATAATCAAAACTTCAAGTTTGTTTTGCGTTCCATGT
TCATTTAATCAATTTTATTATGTCTTTATATCTACAATGAATGACCACAT
ACCTTTGTCGCAATGGCAAATGCTGCAAACCCAGTCCTCTTTATTGAATG
AATGAGAGCATATTTGATTGTCTGTTAACTACTGAAATTTCCAAGAGAAT
TTACTTACAATGTAAAGGAACTAACACAAATTTCAATTTTGTGTATTATA
CTTATCAAGTTGTTTTTATCTTTAAGGTTGAGGAGAACATCTGCAAGTTT
GCCAAGAAAGGTCTAACACCCTCTCAAATTGGTGTTCTTCTACGTGATTC
TCATGGGATTGCTCAGGTGAAGAGTGTTACTGGAAGCAAGATATTGCGTA
TACTGAAGGCGCATGGTGCGTCTTTTTATTATTTCTATTTCCATATTTTG
TTTTATATTTGAAGACAAATTTGTAAATGATTTTGTTATCCTTTTTTTCT
TTGTTGGGTTAGGTCTTGCCCCTGAAATACCTGAGGATTTATACCACCTC
ATCAAGAAAGCCGTCTCAATTAGAAAACATTTGGAAAGGAACAGGAAGGA
CAAGGATTCTAAATTTAGACTGATTTTGGTTGAGAGCAGAATCCATCGCC
TTGCTCGTTACTATAAGAAGACAAAGAAGCTTCCACCAGTATGGAAATAG
TAAGTATCTTTTTTCCGTTTACTTTTGTCTTATTCATGTGACTGTAATAT
GGGTTTTCTTAACCTCACTTGAAGACACCTAATGGGATTGTTCAATCTAA
CACTAGCTAGAGTGTGTTATCCTGTGTGGAAATTAGATCTGTAATTTAGG
ATTCTATTGCTTACTGTGAATGATTTTGCCTTTCCCCAGACATTCACAAT
CTGAAGAACCCATTATATGTGGGAAGCTAATTTTCTTATATGCTGTCCTC
AAGAAACTTGTACATTGGTAGAATGCTTTCCCTTCAGAAATGAAATCGAT
GTGAGATATGTCTAATGTTAGTGTTTGGTTTCCCCCCATTTCCATAAACA
TTCTAGTTACAGGGTGGCATCTGTGACAGTGAGGCTGGAGTGGGTTCTCT
ATATGAAATTATCTTCTTTTCAAGACTGCTTATAAAAATTTGCGCATTGA
AGAGCATTGCTTCTGCTGCTTGCTCAATTCAAATTATATCTTGTTTTGTG
TCAACTAGTTGTTCCTTAATTGCTTATATCCATTGATCTCTTTTTGCAGT
GAGTCTACCACCGCCAGCACCCTTGTGGCATAGGTCGGATATGATCGGCA
CCAATTCTAGGTGCTCACATTGAAAAATCAGGACTAGTTTTTAGTTTGTT
ACTTGTTTGCTTCAAGTTTGGAACTTTATGAAAATCTTCATTGTGGAACT
CCTTGGTAGTTGATTTTGTTTGGATTTTCAAGTGCTCACAATTTTTTTTG
GGCAGATTTATCTTTAATTTTTCAATTGGATAATTTG
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Coding sequence (CDS) from alignment at scaffold_2:16560832..16563268+

>ppa012878m ID=ppa012878m; Name=ppa012878m; organism=Prunus persica; type=CDS; length=456bp; location=Sequence derived from: scaffold_2:16560832..16563268+ (Prunus persica
ATGGGGCGTATGCACAGCAGAGGTAAGGGTATATCGGCTTCAGCTCTTCC
ATACAAGAGGACCCCCCCGAGCTGGCTGAAGATCTCTACTCAGGATGTTG
AGGAGAACATCTGCAAGTTTGCCAAGAAAGGTCTAACACCCTCTCAAATT
GGTGTTCTTCTACGTGATTCTCATGGGATTGCTCAGGTGAAGAGTGTTAC
TGGAAGCAAGATATTGCGTATACTGAAGGCGCATGGTCTTGCCCCTGAAA
TACCTGAGGATTTATACCACCTCATCAAGAAAGCCGTCTCAATTAGAAAA
CATTTGGAAAGGAACAGGAAGGACAAGGATTCTAAATTTAGACTGATTTT
GGTTGAGAGCAGAATCCATCGCCTTGCTCGTTACTATAAGAAGACAAAGA
AGCTTCCACCAGTATGGAAATATGAGTCTACCACCGCCAGCACCCTTGTG
GCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_uS15
IPR009068uS15_NS1_RNA-bd_sf
IPR012606Ribosomal_uS15_N
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation