ppa012880m, ppa012880m (mRNA) Prunus persica

Transcript Overview
Nameppa012880m
Unique Nameppa012880m
TypemRNA
OrganismPrunus persica (Peach)
Sequence length765
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
scaffold_2supercontigscaffold_2:24402259..24404166 -Prunus persica Whole Genome v1.0 Assembly & Annotationn/a
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ppa012880m.gppa012880m.gPrunus persicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012880m.CDS.1ppa012880m.CDS.1Prunus persicaCDS
ppa012880m.CDS.2ppa012880m.CDS.2Prunus persicaCDS
ppa012880m.CDS.3ppa012880m.CDS.3Prunus persicaCDS
ppa012880m.CDS.4ppa012880m.CDS.4Prunus persicaCDS
ppa012880m.CDS.5ppa012880m.CDS.5Prunus persicaCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012880m.five_prime_UTR.1ppa012880m.five_prime_UTR.1Prunus persicafive_prime_UTR


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ppa012880m.three_prime_UTR.1ppa012880m.three_prime_UTR.1Prunus persicathree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ppa012880mppa012880mPrunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
"Phytozome_pacid17657357"
Homology
[Close]
BLAST of ppa012880m vs. Vitis vinifera
Match: GSVIVT01027637001 (assembled CDS)

HSP 1 Score: 284.648 bits (727), Expect = 1.094e-77
Identity = 139/151 (92.05%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK+++ DVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. Vitis vinifera
Match: GSVIVT01018537001 (assembled CDS)

HSP 1 Score: 278.87 bits (712), Expect = 6.004e-76
Identity = 134/151 (88.74%), Postives = 146/151 (96.69%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ P+WLK+++ DVE+NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILR+LK HGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL RYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPTWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRVLKGHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLGRYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: Q3SC82_SOLLC (Cytoplasmic ribosomal protein S13 OS=Solanum lycopersicum GN=ACI39 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.217e-76
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK++APDVE+NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRAPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: Q2V995_SOLTU (Cytoplasmic ribosomal protein S13-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.217e-76
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK++APDVE+NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: G7KG78_MEDTR (40S ribosomal protein S13 OS=Medicago truncatula GN=MTR_5g011910 PE=3 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.451e-75
Identity = 139/151 (92.05%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+SPSWLK+++P+V+E ICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSKGKGISSSALPYKRTSPSWLKISSPEVDETICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: A5B3K9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g00670 PE=3 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.181e-75
Identity = 139/151 (92.05%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK+++ DVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: Q9MAV9_PANGI (Cytoplasmic ribosomal protein S13 OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 5.461e-75
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK+T  DV++NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: F5A837_CAMSI (Cytoplasmic ribosomal protein OS=Camellia sinensis GN=CRP1 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.132e-75
Identity = 139/151 (92.05%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRM+S GKG+SASALPYKR+ P+WLK+++PDVEENICKFAKK MTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMYSRGKGISASALPYKRTPPNWLKISSPDVEENICKFAKKDMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: B6CBQ9_SOYBN (Ribosomal protein S13 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.132e-75
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK+++ DVEENICKFAKKG+TPSQIGVILRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: A9PDV6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_666912 PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 9.314e-75
Identity = 137/151 (90.73%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSHGKG+SASALPYKR+ PSWLK++A DVE+NICKFAKKG+TPSQIGVILRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYES+TASTLVA
Sbjct:    1 MGRMHSHGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: D7LRU2_ARALL (40S ribosomal protein S13 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_907607 PE=3 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.217e-74
Identity = 140/151 (92.72%), Postives = 146/151 (96.69%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKRSSPSWLK T  DV+E+ICKFAKKG+TPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSKGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy TrEMBL
Match: B9RDA6_RICCO (40S ribosomal protein S13, putative OS=Ricinus communis GN=RCOM_1611610 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.075e-74
Identity = 138/151 (91.39%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK+++ DV+ENICKFAKKG+ PSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVDENICKFAKKGLRPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS132_ARATH (40S ribosomal protein S13-2 OS=Arabidopsis thaliana GN=RPS13B PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 1.783e-76
Identity = 140/151 (92.72%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKRSSPSWLK T+ DV+E+ICKFAKKG+TPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS13_SOYBN (40S ribosomal protein S13 OS=Glycine max GN=RPS13 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 2.328e-76
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK+++ DVEENICKFAKKG+TPSQIGVILRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS131_ARATH (40S ribosomal protein S13-1 OS=Arabidopsis thaliana GN=RPS13A PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 3.041e-76
Identity = 140/151 (92.72%), Postives = 146/151 (96.69%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKRSSPSWLK T  DV+E+ICKFAKKG+TPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS13_PEA (40S ribosomal protein S13 OS=Pisum sativum GN=RPS13 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 2.846e-74
Identity = 135/151 (89.40%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGR+HS GKG+S+SALPY+R++PSWLK+++ DV+E ICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLER RKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRLHSKGKGISSSALPYRRTAPSWLKISSQDVDETICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERFRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS132_ORYSJ (40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica GN=Os08g0117300 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.047e-68
Identity = 129/151 (85.43%), Postives = 136/151 (90.07%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK  A DVEE I K AKKG  PSQIGV+LRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYK+TKKLPP WKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKTAASDVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS131_ORYSJ (40S ribosomal protein S13-1 OS=Oryza sativa subsp. japonica GN=Os08g0117200 PE=2 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 3.980e-68
Identity = 127/151 (84.11%), Postives = 136/151 (90.07%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SA+PYKR+ PSW+K  A DVEE I K AKKG  PSQIGV+LRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYK+TKKLPP WKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS13_MAIZE (40S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 1.513e-67
Identity = 127/151 (84.11%), Postives = 135/151 (89.40%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MG MHS GKG+S+SALPYKR+ P+WLK  A DVEE I K AKKG  PSQIGV+LRD HGI  VKSVTGSKILRILKAHGLAPEIPEDLY LIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYK+TKKLPP WKYESTTASTLVA
Sbjct:    1 MGAMHSRGKGISSSALPYKRTPPTWLKTAASDVEEMITKAAKKGQMPSQIGVLLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS13_XENLA (40S ribosomal protein S13 OS=Xenopus laevis GN=rps13 PE=3 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 4.554e-64
Identity = 116/151 (76.82%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMH+ GKG+S SALPY+RS P+WLK+T+ DV+E I K AKKG+TPSQIGVILRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRL+RYYK  + LPP WKYES+TAS LVA
Sbjct:    1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTRRVLPPNWKYESSTASALVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS13_RAT (40S ribosomal protein S13 OS=Rattus norvegicus GN=Rps13 PE=2 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 4.554e-64
Identity = 116/151 (76.82%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMH+ GKG+S SALPY+RS P+WLK+T+ DV+E I K AKKG+TPSQIGVILRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRL+RYYK  + LPP WKYES+TAS LVA
Sbjct:    1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
[Close]
BLAST of ppa012880m vs. ExPASy Swiss-Prot
Match: RS13_MOUSE (40S ribosomal protein S13 OS=Mus musculus GN=Rps13 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 4.554e-64
Identity = 116/151 (76.82%), Postives = 137/151 (90.73%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMH+ GKG+S SALPY+RS P+WLK+T+ DV+E I K AKKG+TPSQIGVILRDSHG+AQV+ VTG+KILRILK+ GLAP++PEDLYHLIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRL+RYYK  + LPP WKYES+TAS LVA
Sbjct:    1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA 151
[Close]
BLAST of ppa012880m vs. TAIR10
Match: AT4G00100.1 (| Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosomal protein S13A | chr4:37172-38123 FORWARD LENGTH=151)

HSP 1 Score: 284.263 bits (726), Expect = 2.046e-77
Identity = 140/151 (92.72%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKRSSPSWLK T+ DV+E+ICKFAKKG+TPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. TAIR10
Match: AT3G60770.1 (| Symbols: | Ribosomal protein S13/S15 | chr3:22460525-22461656 REVERSE LENGTH=151)

HSP 1 Score: 283.493 bits (724), Expect = 3.491e-77
Identity = 140/151 (92.72%), Postives = 146/151 (96.69%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKRSSPSWLK T  DV+E+ICKFAKKG+TPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. Populus trichicarpa v2.0
Match: POPTR_0015s14490.1 ()

HSP 1 Score: 283.493 bits (724), Expect = 3.941e-77
Identity = 137/151 (90.73%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSHGKG+SASALPYKR+ PSWLK++A DVE+NICKFAKKG+TPSQIGVILRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYES+TASTLVA
Sbjct:    1 MGRMHSHGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012880m vs. Populus trichicarpa v2.0
Match: POPTR_0014s06420.1 ()

HSP 1 Score: 280.411 bits (716), Expect = 3.336e-76
Identity = 136/151 (90.07%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+SPSWLK++  DV++NICKFAKKG+TPSQIGVILRDSHGIAQVK+VTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSKGKGISASALPYKRTSPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKTVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. Populus trichicarpa v2.0
Match: POPTR_0002s14780.1 ()

HSP 1 Score: 276.944 bits (707), Expect = 3.689e-75
Identity = 134/151 (88.74%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK++  DV++NICKFAKKG+TPSQIGVILRDSHGIAQVK+VTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYES+TASTLVA
Sbjct:    1 MGRMHSKGKGISASALPYKRTPPSWLKISPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012880m vs. Populus trichicarpa v2.0
Match: POPTR_0012s14440.1 ()

HSP 1 Score: 276.174 bits (705), Expect = 6.292e-75
Identity = 134/151 (88.74%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+SPSWLK++A DV+++ICKFAKKG+TPSQIGVILRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKL PVWKYES+TASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTSPSWLKISAQDVDDSICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLAPVWKYESSTASTLVA 151
[Close]
BLAST of ppa012880m vs. GDR
Match: MDP0000288520 (MDP0000288520)

HSP 1 Score: 266.929 bits (681), Expect = 5.050e-72
Identity = 130/140 (92.86%), Postives = 136/140 (97.14%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWK 420
            MGRMHS GKG+SASALPYKR+ PSWLK++  DVEENICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWK
Sbjct:  315 MGRMHSRGKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 454
[Close]
BLAST of ppa012880m vs. GDR
Match: MDP0000517303 (MDP0000517303)

HSP 1 Score: 252.677 bits (644), Expect = 9.855e-68
Identity = 125/139 (89.93%), Postives = 131/139 (94.24%), Query Frame = 1 
Query:    4 GRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWK 420
            GR     KG+SASALPYKR+ PSWLK++  DVEENICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWK
Sbjct:   96 GRRVVDTKGISASALPYKRTPPSWLKISTQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 234
[Close]
BLAST of ppa012880m vs. GDR
Match: MDP0000262752 (MDP0000262752)

HSP 1 Score: 246.899 bits (629), Expect = 5.408e-66
Identity = 122/126 (96.83%), Postives = 126/126 (100.00%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLS 378
            MGRMHSHGKGMSASALPYKRS+PSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVK+VTGSKILR+LKA+GLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLS
Sbjct:    1 MGRMHSHGKGMSASALPYKRSAPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKTVTGSKILRVLKAYGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLS 126
[Close]
BLAST of ppa012880m vs. GDR
Match: MDP0000753788 (MDP0000753788)

HSP 1 Score: 214.927 bits (546), Expect = 2.277e-56
Identity = 106/108 (98.15%), Postives = 108/108 (100.00%), Query Frame = 1 
Query:   97 VEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWK 420
            VEENICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWK
Sbjct:  446 VEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWK 553
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|350534834|ref|NP_001234162.1| (cytoplasmic ribosomal protein S13 [Solanum lycopersicum] >gi|68449762|gb|AAY97868.1| cytoplasmic ribosomal protein S13 [Solanum lycopersicum])

HSP 1 Score: 288.886 bits (738), Expect = 1.936e-76
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK++APDVE+NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRAPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|82621170|gb|ABB86273.1| (cytoplasmic ribosomal protein S13-like [Solanum tuberosum])

HSP 1 Score: 288.886 bits (738), Expect = 1.936e-76
Identity = 141/151 (93.38%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK++APDVE+NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKISAPDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|357481925|ref|XP_003611248.1| (40S ribosomal protein S13 [Medicago truncatula] >gi|355512583|gb|AES94206.1| 40S ribosomal protein S13 [Medicago truncatula] >gi|388501908|gb|AFK39020.1| unknown [Medicago truncatula])

HSP 1 Score: 285.419 bits (729), Expect = 2.140e-75
Identity = 139/151 (92.05%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+SPSWLK+++P+V+E ICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSKGKGISSSALPYKRTSPSWLKISSPEVDETICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|225453951|ref|XP_002280012.1| (PREDICTED: 40S ribosomal protein S13 [Vitis vinifera] >gi|147820740|emb|CAN69640.1| hypothetical protein VITISV_028568 [Vitis vinifera] >gi|296089171|emb|CBI38874.3| unnamed protein product [Vitis vinifera])

HSP 1 Score: 284.648 bits (727), Expect = 3.651e-75
Identity = 139/151 (92.05%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK+++ DVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYK+TKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|388521223|gb|AFK48673.1| (unknown [Lotus japonicus] >gi|388521665|gb|AFK48894.1| unknown [Lotus japonicus])

HSP 1 Score: 284.263 bits (726), Expect = 4.768e-75
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK+ + DVEENICKFAKKG+TPSQIGVILRDSHGIAQV+SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKIASQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|8131699|dbj|BAA96366.1| (cytoplasmic ribosomal protein S13 [Panax ginseng])

HSP 1 Score: 284.263 bits (726), Expect = 4.768e-75
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKR+ PSWLK+T  DV++NICKFAKKG+TPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRTPPSWLKITPQDVDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|18411224|ref|NP_567151.1| (40S ribosomal protein S13-2 [Arabidopsis thaliana] >gi|27808638|sp|P59224.1|RS132_ARATH RecName: Full=40S ribosomal protein S13-2 >gi|13877541|gb|AAK43848.1|AF370471_1 similar to ribosomal protein S13 [Arabidopsis thaliana] >gi|6521012|dbj|BAA88058.1| cytoplasmic ribosomal protein S13 [Arabidopsis thaliana] >gi|15982874|gb|AAL09784.1| AT4g00100/F6N15_7 [Arabidopsis thaliana] >gi|21593617|gb|AAM65584.1| putative ribosomal protein S13 [Arabidopsis thaliana] >gi|30102866|gb|AAP21351.1| At4g00100 [Arabidopsis thaliana] >gi|332656423|gb|AEE81823.1| 40S ribosomal protein S13-2 [Arabidopsis thaliana])

HSP 1 Score: 284.263 bits (726), Expect = 4.768e-75
Identity = 140/151 (92.72%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+SASALPYKRSSPSWLK T+ DV+E+ICKFAKKG+TPSQIGVILRDSHGI QVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISASALPYKRSSPSWLKTTSQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|330541751|gb|AEC32112.1| (cytoplasmic ribosomal protein [Camellia sinensis])

HSP 1 Score: 283.878 bits (725), Expect = 6.227e-75
Identity = 139/151 (92.05%), Postives = 148/151 (98.01%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRM+S GKG+SASALPYKR+ P+WLK+++PDVEENICKFAKK MTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMYSRGKGISASALPYKRTPPNWLKISSPDVEENICKFAKKDMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
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BLAST of ppa012880m vs. NCBI nr
Match: gi|351722010|ref|NP_001237229.1| (40S ribosomal protein S13 [Glycine max] >gi|356514135|ref|XP_003525762.1| PREDICTED: 40S ribosomal protein S13-like [Glycine max] >gi|356514137|ref|XP_003525763.1| PREDICTED: 40S ribosomal protein S13-like [Glycine max] >gi|356563264|ref|XP_003549884.1| PREDICTED: 40S ribosomal protein S13-like [Glycine max] >gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S ribosomal protein S13 >gi|44662862|gb|AAS47510.1| ribosomal protein S13 [Glycine max] >gi|161367348|gb|ABX71080.1| ribosomal protein S13 [Glycine max] >gi|255625887|gb|ACU13288.1| unknown [Glycine max])

HSP 1 Score: 283.878 bits (725), Expect = 6.227e-75
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHS GKG+S+SALPYKR+ PSWLK+++ DVEENICKFAKKG+TPSQIGVILRDSHGIAQV SVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYESTTASTLVA
Sbjct:    1 MGRMHSRGKGISSSALPYKRTPPSWLKISSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
[Close]
BLAST of ppa012880m vs. NCBI nr
Match: gi|224136782|ref|XP_002322414.1| (predicted protein [Populus trichocarpa] >gi|118485405|gb|ABK94559.1| unknown [Populus trichocarpa] >gi|222869410|gb|EEF06541.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 283.493 bits (724), Expect = 8.133e-75
Identity = 137/151 (90.73%), Postives = 149/151 (98.68%), Query Frame = 1 
Query:    1 MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRKHLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLVA 453
            MGRMHSHGKG+SASALPYKR+ PSWLK++A DVE+NICKFAKKG+TPSQIGVILRDSHGIAQV+SVTG++ILRILKAHGLAPEIPEDLYHLIKKAV+IRKHLERNRKDKDSKFRLILVESRIHRL+RYYKKTKKLPPVWKYES+TASTLVA
Sbjct:    1 MGRMHSHGKGISASALPYKRTPPSWLKISAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVWKYESSTASTLVA 151
The following BLAST results are available for this feature:
BLAST of ppa012880m vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Vitis vinifera)
Total hits: 2
Match NameE-valueIdentityDescription
GSVIVT010276370011.094e-7792.05assembled CDS[more]
GSVIVT010185370016.004e-7688.74assembled CDS[more]
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BLAST of ppa012880m vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
Q3SC82_SOLLC2.217e-7693.38Cytoplasmic ribosomal protein S13 OS=Solanum lycop... [more]
Q2V995_SOLTU2.217e-7693.38Cytoplasmic ribosomal protein S13-like OS=Solanum ... [more]
G7KG78_MEDTR2.451e-7592.0540S ribosomal protein S13 OS=Medicago truncatula G... [more]
A5B3K9_VITVI4.181e-7592.05Putative uncharacterized protein OS=Vitis vinifera... [more]
Q9MAV9_PANGI5.461e-7592.05Cytoplasmic ribosomal protein S13 OS=Panax ginseng... [more]
F5A837_CAMSI7.132e-7592.05Cytoplasmic ribosomal protein OS=Camellia sinensis... [more]
B6CBQ9_SOYBN7.132e-7592.05Ribosomal protein S13 OS=Glycine max PE=2 SV=1[more]
A9PDV6_POPTR9.314e-7590.73Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7LRU2_ARALL1.217e-7492.7240S ribosomal protein S13 OS=Arabidopsis lyrata su... [more]
B9RDA6_RICCO2.075e-7491.3940S ribosomal protein S13, putative OS=Ricinus com... [more]

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BLAST of ppa012880m vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs UniProt Swiss-Prot)
Total hits: 25
Match NameE-valueIdentityDescription
RS132_ARATH1.783e-7692.7240S ribosomal protein S13-2 OS=Arabidopsis thalian... [more]
RS13_SOYBN2.328e-7692.0540S ribosomal protein S13 OS=Glycine max GN=RPS13 ... [more]
RS131_ARATH3.041e-7692.7240S ribosomal protein S13-1 OS=Arabidopsis thalian... [more]
RS13_PEA2.846e-7489.4040S ribosomal protein S13 OS=Pisum sativum GN=RPS1... [more]
RS132_ORYSJ1.047e-6885.4340S ribosomal protein S13-2 OS=Oryza sativa subsp.... [more]
RS131_ORYSJ3.980e-6884.1140S ribosomal protein S13-1 OS=Oryza sativa subsp.... [more]
RS13_MAIZE1.513e-6784.1140S ribosomal protein S13 OS=Zea mays GN=RPS13 PE=... [more]
RS13_XENLA4.554e-6476.8240S ribosomal protein S13 OS=Xenopus laevis GN=rps... [more]
RS13_RAT4.554e-6476.8240S ribosomal protein S13 OS=Rattus norvegicus GN=... [more]
RS13_MOUSE4.554e-6476.8240S ribosomal protein S13 OS=Mus musculus GN=Rps13... [more]

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BLAST of ppa012880m vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs TAIR 10)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G00100.12.046e-7792.72| Symbols: ATRPS13A, RPS13, PFL2, RPS13A | ribosom... [more]
AT3G60770.13.491e-7792.72| Symbols: | Ribosomal protein S13/S15 | chr3:224... [more]
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BLAST of ppa012880m vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Populus trichocarpa v2.0)
Total hits: 4
Match NameE-valueIdentityDescription
POPTR_0015s14490.13.941e-7790.73[more]
POPTR_0014s06420.13.336e-7690.07[more]
POPTR_0002s14780.13.689e-7588.74[more]
POPTR_0012s14440.16.292e-7588.74[more]
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BLAST of ppa012880m vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs Malus x domestica v1.0)
Total hits: 4
Match NameE-valueIdentityDescription
MDP00002885205.050e-7292.86MDP0000288520[more]
MDP00005173039.855e-6889.93MDP0000517303[more]
MDP00002627525.408e-6696.83MDP0000262752[more]
MDP00007537882.277e-5698.15MDP0000753788[more]
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BLAST of ppa012880m vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Prunus persica v1.0 vs NCBI nr )
Total hits: 25
Match NameE-valueIdentityDescription
gi|350534834|ref|NP_001234162.1|1.936e-7693.38cytoplasmic ribosomal protein S13 [Solanum lycoper... [more]
gi|82621170|gb|ABB86273.1|1.936e-7693.38cytoplasmic ribosomal protein S13-like [Solanum tu... [more]
gi|357481925|ref|XP_003611248.1|2.140e-7592.0540S ribosomal protein S13 [Medicago truncatula] >g... [more]
gi|225453951|ref|XP_002280012.1|3.651e-7592.05PREDICTED: 40S ribosomal protein S13 [Vitis vinife... [more]
gi|388521223|gb|AFK48673.1|4.768e-7592.05unknown [Lotus japonicus] >gi|388521665|gb|AFK4889... [more]
gi|8131699|dbj|BAA96366.1|4.768e-7592.05cytoplasmic ribosomal protein S13 [Panax ginseng][more]
gi|18411224|ref|NP_567151.1|4.768e-7592.7240S ribosomal protein S13-2 [Arabidopsis thaliana]... [more]
gi|330541751|gb|AEC32112.1|6.227e-7592.05cytoplasmic ribosomal protein [Camellia sinensis][more]
gi|351722010|ref|NP_001237229.1|6.227e-7592.0540S ribosomal protein S13 [Glycine max] >gi|356514... [more]
gi|224136782|ref|XP_002322414.1|8.133e-7590.73predicted protein [Populus trichocarpa] >gi|118485... [more]

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InterPro
Analysis Name: InterProScan of Prunus persica Whole Genome v1.0
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 66..148
score: 1.2
IPR000589Ribosomal protein S15PROSITEPS00362RIBOSOMAL_S15coord: 98..128
score
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 65..142
score: 3.4
IPR012606Ribosomal protein S13/S15, N-terminalPFAMPF08069Ribosomal_S13_Ncoord: 1..60
score: 2.2
NoneNo IPR availablePANTHERPTHR11885FAMILY NOT NAMEDcoord: 1..151
score: 2.3e
NoneNo IPR availableSEGsegsegcoord: 42..51
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>ppa012880m ID=ppa012880m; Name=ppa012880m; organism=Prunus persica; type=mRNA; length=765bp
GAGAGGAAAACCATTTGCGGCTCGTCTCAGAGAACCTAAGCACAGGGACA
ACCTCCGCTTCCATCTCTCCCATCATGGGTCGTATGCACAGTCATGGAAA
GGGCATGTCAGCCTCAGCTCTGCCATACAAGAGAAGTTCGCCTAGCTGGT
TGAAGGTCACTGCTCCAGATGTTGAAGAGAACATCTGCAAGTTTGCAAAG
AAGGGTATGACTCCATCTCAGATCGGTGTGATTCTTCGTGACTCGCATGG
CATTGCTCAGGTTAAGAGCGTGACTGGAAGCAAGATCTTGCGTATTCTTA
AAGCTCATGGTCTTGCTCCCGAAATTCCTGAGGATCTGTACCATCTTATC
AAGAAGGCAGTGTCAATTAGGAAGCATTTGGAGAGGAATAGGAAGGATAA
GGATTCAAAGTTTCGGTTGATTTTGGTTGAGAGCAGGATCCACAGGCTCT
CTCGTTACTACAAGAAAACAAAGAAGCTTCCTCCTGTCTGGAAATACGAG
TCAACCACTGCCAGCACTCTGGTTGCTTAGGTTAGGAAAGCAAGGTGGAA
GGTTTTGGCATGGAAGGACAGAGAAGCCTAGAGATTATAGTTGCTCGCAT
TTGTGGTCTTCAGATTTTGTATCAACTTTTGCATTAATCGTACTACTCTG
TGTGTCTGGATGTTTTCTTTCATCAATTCAAGTATTTCTTGTTGTGGATG
TTACTTAAGGAAATCCGATTTTGTATCAACTTTTTGCATTAATCGGATGT
TTAAAATTTCGATTT
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protein sequence of ppa012880m

>ppa012880m ID=ppa012880m; Name=ppa012880m; organism=Prunus persica; type=polypeptide; length=152bp
MGRMHSHGKGMSASALPYKRSSPSWLKVTAPDVEENICKFAKKGMTPSQI
GVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVSIRK
HLERNRKDKDSKFRLILVESRIHRLSRYYKKTKKLPPVWKYESTTASTLV
A*
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mRNA from alignment at scaffold_2:24402259..24404166-

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ppa012880m ID=ppa012880m; Name=ppa012880m; organism=Prunus persica; type=mRNA; length=1908bp; location=Sequence derived from: scaffold_2:24402259..24404166- (Prunus persica
GAGAGGAAAACCATTTGCGGCTCGTCTCAGAGAACCTAAGCACAGGGACA
ACCTCCGCTTCCATCTCTCCCATCATGGGTCGTATGCACAGTCATGGGTA
CTGCTTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATGTATTT
CTGTTCATACTACCAGTTTCCGATTTTTATTTATTTATCTTTTCAATTTT
ATCTGGGGGCCTGCAGAAAGGGCATGTCAGCCTCAGCTCTGCCATACAAG
AGAAGTTCGCCTAGCTGGTTGAAGGTCACTGCTCCAGATGTAAGTAAATG
AAAAACCCTAGATTTATTTTTAAGTATGTAATTGTTGATGTTAATTTGAG
TGGGCTTTATCTTTGATTAAGGTTGAAGAGAACATCTGCAAGTTTGCAAA
GAAGGGTATGACTCCATCTCAGATCGGTGTGATTCTTCGTGACTCGCATG
GCATTGCTCAGGTTAAGAGCGTGACTGGAAGCAAGATCTTGCGTATTCTT
AAAGCTCATGGTATGCCTTTCTTTTAATAATATTTTTCTATATGAGTTTA
TTGCACTTTTTAGTTGCTACAAAAATTATGAAGGTTTGGATGTTCAGTGG
GACTTGTGGGATTGAAACCCATTTCTCCATTTATCTCGATTACTGAGGTG
AAGATAATATATTTAAGCACTAATTGATTGTATGATTAGGCTAGCTCGAT
AAGATTACTATTGTGTCTTCATTTTGTACATTTCATCTCTCTGAAAACGT
AAAGAAGATTAAGAGTTTGGTTTTGATCTCAAACAAGTCTCTGGCGTTTT
CGTTTTTCGTTTCCTTCTAACCAAATGACAGCCTACTTTTTGTTTTTGTT
TTCCTTAAAAAAGTGTTATGGAAAAAATTTATAATTTCCATTTGTTGTTT
GGCTAGGTCTTGCTCCCGAAATTCCTGAGGATCTGTACCATCTTATCAAG
AAGGCAGTGTCAATTAGGAAGCATTTGGAGAGGAATAGGAAGGATAAGGA
TTCAAAGTTTCGGTTGATTTTGGTTGAGAGCAGGATCCACAGGCTCTCTC
GTTACTACAAGAAAACAAAGAAGCTTCCTCCTGTCTGGAAATAGTAAGTA
TTCTTTGTCACTTCTTTTCCAACTTCACCATTGTTATGGTTCTGGCATTG
CTGTTAGGGGCATGTTGCTTGCCTTGTTGCTTTGCATGTTTAAGGAAGTA
GAACAAATAGGGTTCTTTGCTTATCAACTTCACCATTGTTATGGTTCTGG
CATTGCTGTTCGGGGCATGTTGCTTGCCTTGTTGCTTTGCATGTGTAAGG
AAGTAGAACAAATAGGGTTCTTTGCTTATCACCTGCCGAGTTGTATCTTA
ATCTGATGGGGGGGGGGGGGGGGGGGGGGGGCAGTATGCTTTTCTAATTT
GTTTGTGGGGTTGAAATCTGTATATCACACAATAGCACAAGCATATGAAT
CTTCTCAGTTTGTATATTTGGTCAGTAATTCAAAAAGGGCTTTATCTTAA
TGATGTAGAGCATCTAATTAAGCAGATGATTAGTCTCATTTATTTATGTG
TTATGTGCCGCCAATGTTTAGATTCATTGCTTACAGATTTGTTCTGTGTT
TCCGCATAATAATGTTGTGAATTCTGCTTTGTTTTACAGCGAGTCAACCA
CTGCCAGCACTCTGGTTGCTTAGGTTAGGAAAGCAAGGTGGAAGGTTTTG
GCATGGAAGGACAGAGAAGCCTAGAGATTATAGTTGCTCGCATTTGTGGT
CTTCAGATTTTGTATCAACTTTTGCATTAATCGTACTACTCTGTGTGTCT
GGATGTTTTCTTTCATCAATTCAAGTATTTCTTGTTGTGGATGTTACTTA
AGGAAATCCGATTTTGTATCAACTTTTTGCATTAATCGGATGTTTAAAAT
TTCGATTT
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Coding sequence (CDS) from alignment at scaffold_2:24402259..24404166-

>ppa012880m ID=ppa012880m; Name=ppa012880m; organism=Prunus persica; type=CDS; length=456bp; location=Sequence derived from: scaffold_2:24402259..24404166- (Prunus persica
ATGGGTCGTATGCACAGTCATGGAAAGGGCATGTCAGCCTCAGCTCTGCC
ATACAAGAGAAGTTCGCCTAGCTGGTTGAAGGTCACTGCTCCAGATGTTG
AAGAGAACATCTGCAAGTTTGCAAAGAAGGGTATGACTCCATCTCAGATC
GGTGTGATTCTTCGTGACTCGCATGGCATTGCTCAGGTTAAGAGCGTGAC
TGGAAGCAAGATCTTGCGTATTCTTAAAGCTCATGGTCTTGCTCCCGAAA
TTCCTGAGGATCTGTACCATCTTATCAAGAAGGCAGTGTCAATTAGGAAG
CATTTGGAGAGGAATAGGAAGGATAAGGATTCAAAGTTTCGGTTGATTTT
GGTTGAGAGCAGGATCCACAGGCTCTCTCGTTACTACAAGAAAACAAAGA
AGCTTCCTCCTGTCTGGAAATACGAGTCAACCACTGCCAGCACTCTGGTT
GCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_uS15
IPR009068uS15_NS1_RNA-bd_sf
IPR012606Ribosomal_uS15_N
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular anatomical structure
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation