Ppe-HB-qBlush4 | GDR

Haplotype Block Overview

Annotated Terms

Stock Haplotype

Haplotype Block Overview

Name	Ppe-HB-qBlush4
Species	Prunus persica
Stock Haplotype	[view all 7]
Haplotype	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Pp04	chromosome	Pp04:10582092..11208347 .	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)	Rawandoozi ZJ, Hartmann TP, Carpenedo S, Gasic K, da Silva Linge C, Cai L, Van de Weg E, Byrne DH. Identification and characterization of QTLs for fruit quality traits in peach through a multi-family approach.. BMC genomics. 2020 Jul 29; 21(1):522.

Publications


Year	Publication
2020	Rawandoozi ZJ, Hartmann TP, Carpenedo S, Gasic K, da Silva Linge C, Cai L, Van de Weg E, Byrne DH. Identification and characterization of QTLs for fruit quality traits in peach through a multi-family approach.. BMC genomics. 2020 Jul 29; 21(1):522.

Stock Haplotype

Name	Haplotype
TX2B136	h1
TXW1490_1	h1 h4
Galaxy	h1 h3
VICTOR	h1 h4
Y426–371	h2 h3
Y434–40	h1 h3
Y435–246	h1

Map Positions


Haplotype Block	Map Name	Linkage Group	Start	Stop
Ppe-HB-qBlush4	Peach-RosBREED-4K-2019	4	42.33	44.83

Projects


Project Name
Peach-fruit_quality-Rawandoozi-Haplotype-2020

Haplotypes

Marker	h1	h2	h3	h4
SNP_IGA_409901	A	B	B	A
SNP_IGA_410134	B	B	A	A
SNP_IGA_410165	B	B	A	A
SNP_IGA_410336	B	B	A	B
SNP_IGA_410398	B	B	A	A
SNP_IGA_410478	B	B	A	B
SNP_IGA_410794	B	B	A	A
SNP_IGA_410955	B	B	A	A
SNP_IGA_411147	B	B	A	B
SNP_IGA_411188	A	A	B	A
SNP_IGA_411196	B	B	A	A
SNP_IGA_411601	B	B	A	B
SNP_IGA_411637	B	B	A	B
SNP_IGA_412338	B	B	A	B

Annotated Terms

The following terms have been associated with this haplotype_block:

Vocabulary: **Rosaceae Trait Ontology**
Term	Definition
MAIN:000201521	skin overcolor