| tfGDR1039 |
Cockerton HM, Li B, Vickerstaff RJ, Eyre CA, Sargent DJ, Armitage AD, Marina-Montes C, Garcia-Cruz A, Passey AJ, Simpson DW, Harrison RJ. Identifying Verticillium dahliae Resistance in Strawberry Through Disease Screening of Multiple Populations and Image Based Phenotyping. Frontiers in plant science. 2019; 10:924. |
pub
SNP genotype data for mapping population available in the pub page above
|
| N/A |
- Vanderzande S, Hias N, Edge-Garza D, Costes E, Davey M, Keulemans J. (2016) Sylleptic branching in winter headed trees in apple (Malus x domestica): genetic effects and relationships with other tree architectural characteristics. Tree Genetics & Genomes 12: 87
- Vanderzande S, Micheletti D, Troggio M, Davey M, Keulemans J. (2017) Genetic diversity, population structure and linkage disequilibrium of elite and local apple accessions from Belgium using the IRSC array. Tree Genetics & Genomes 13: 125
|
Phenotypic_and_Genotypic_data_Stijn_Vanderzande |
| tfGDR1038 |
Vanderzande S, Howard NP, Cai L, Da Silva Linge C, Antanaviciute L, Bink MCAM, Kruisselbrink JW, Bassil N, Gasic K, Iezzoni A, van de Weg E, Peace C. High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow. PLOS ONE in press |
SNP and haplotype genotype data for apple, peach and sweet cherry crop reference sets |
| tfGDR1037 |
Cai L, Quero-García J, Barreneche T, Dirlewanger E, Saski C, Iezzoni A. A fruit firmness QTL identified on linkage group 4 in sweet cherry (Prunus avium L.) is associated with domesticated and bred germplasm. Scientific reports. 2019 Mar 21; 9(1):5008. |
|
| tfGDR1036 |
Da Silva Linge C., Antanaviciute L., Abdelghafar A., Arus P., Bassi D., Rossini L. and Gasic K. (2018) High density, multi-population consensus genetic linkage map for peach (Prunus persica L. Batsch) - a novel reference genetic linkage map for Prunus. PLOS ONE (in press) |
tfGDR1036_peach_consensus_map
tfGDR1036_ZC2_map
(when published, the data will be integrated and made be accessible through pub page)
|
| tfGDR1035 |
Sara Montanari; Luca Bianco; Brian J. Allen; Pedro J. Martínez-García; Nahla V. Bassil; Joseph Postman; Mareike Knäbel; Biff Kitson; Cecilia H. Deng; David Chagné; Marc W. Crepeau; Charles H. Langley; Kate Evans; Amit Dhingra; Michela Troggio; David B. Neale. Development of a highly efficient Axiom™ 70K SNP Array for Pyrus and evaluation for high-density mapping and germplasm characterization. BMC Genomics (accepted for publication) |
tfGDR1035
(when published, the data will be integrated and made be accessible through pub page and SNP marker search page)
|
| N/A |
High-density linkage maps constructed in sweet cherry (Prunus avium L.) using cross- and self-pollination populations reveal chromosomal homozygosity in inbred families and non-syntenic regions with the peach genome |
pub |
| tfGDR1034 |
Mapping X-disease Phytoplasma Resistance" in Prunus virginiana. accepted to Frontiers in Plant Science |
pub |
| tfGDR1033 |
Identification of bloom date QTLs and haplotype analysis in tetraploid sour cherry (Prunus cerasus) |
pub | haplotype data |
| N/A |
Serra O, Giné-Bordonaba J, Eduardo I, Bonany J, Echeverria G, Larrigaudière C, Arús P. Genetic analysis of the slow-melting flesh character in peach.Tree Genetics & Genomes (2017) 13: 77. |
genotype/phenotype data |
| tfGDR1032 |
Biscarini and Nazzicari et al. Genome-enabled predictions for fruit weight and quality from repeated records in European peach progenies. BMC genomics. 2017. 18(1):432. |
genotype/phenotype data |
| tfGDR1031 |
Mora et al. Integrated QTL detection for key breeding traits in multiple peach progenies. BMC genomics. 2017. 18(1):404. |
genotype/phenotype data |
| tfGDR1030 |
Marchese A, Giovannini D, Leone A, Mafrica R, Palasciano M, Cantini C, Di Vaio C, De Salvador FR, Giacalone G, Caruso T, Marra FP. S-genotype identification, genetic diversity and structure analysis of Italian sweet cherry germplasm. Tree Genetics & Genomes (2017) 13: 93. |
pub | project |
| tfGDR1029 |
Mgbechi-Ezeri J, Porter L, Johnson KB, Oraguzie N. Assessment of sweet cherry (Prunus avium L.) genotypes for response to bacterial canker disease. Euphytica. 2017; 213:145. |
pub |
| N/A |
Martínez-García PJ, Parfitt DE, Ogundiwin EA, Fass J, Chan HM, Ahmad R, Lurie S, Dandekar A, Gradziel TM, Crisosto CH. Tree genetics & genomes. 2013; 9(1):19-36. |
pub | map data (POP_DG, POP_DF, concensus), SNP info |
| N/A |
Urrestarazu J, Denancé C, Ravon E, Guyader A, Guisnel R, Feugey L, Poncet C, Lateur M, Houben P, Ordidge M et al. BMC plant biology. 2016 Jun 08; 16(1):130. |
pub | genotype data |
| tfGDR1028 |
Barać G, Ognjanov V, Obreht Vidaković D, Dorić D, Ljubojević M, Dulić J, Miodragović M, Gašić K (2107) Genetic diversity and population structure of European ground cherry (Prunus fruticosa Pall.) using SSR markers. Scientia Horticulturae |
pub | project | genotype data |
| tfGDR1027 |
Pagliarani G., Dapena E. , Miñarro M. , Denancé C. , Lespinasse Y. , Rat-Morris E. , Troggio M. , Durel C.E. , Tartarini S. Fine mapping of the rosy apple aphid resistance locus Dp-fl on Linkage Group 8 of the apple cultivar ‘Florina’. Tree Genetics & Genomes 2016, 12:56 |
pub |
| tfGDR1025 |
José Luis Zeballos, Walid Abidi , Rosa Giménez, Antonio J. Monforte, María Ángeles Moreno, Yolanda Gogorcena. Mapping QTLs associated with fruit quality traits in peach [Prunus persica (L.) Batsch] using SNP maps. Tree Genetics & Genomes June 2016, 12:37 |
pub |
| tfGDR1023 |
Mahoney et al. A high density linkage map of the ancestral diploid strawberry, F. iinumae, using SNP markers from the IStraw90 Array and GBS. The Plant Genome 2016 9(2) |
pub |
| tfGDR1021 |
Ben Sadok et al. Apple fruit texture QTLs: year and cold storage effects on sensory and instrumental traits. Tree Genetics & Genomes 2015 11:119 |
pub |
| tfGDR1020 |
Tsuruta and Mukai. Hybrid seedling inviability locus (HIs1 ) mapped on linkage group 4 of the Japanese flowering cherry, Cerasus x yedoensis 'Somei-yoshino'. Tree Genetics & Genomes 2015 11:88 |
pub |
| tfGDR1019 |
Castède et al. Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium). PloS one. 2015; 10(11):e0143250. |
pub |
| tfGDR1018 |
Montanari et al. Genetic mapping of Cacopsylla pyri resistance in an interspecific pear (Pyrus spp.) population. Tree Genetics & Genomes 2015 11:74 |
pub |
| tfGDR1017 |
Gao et al. Genetic diversity of Malus cultivars and wild relatives in the Chinese National Repository of Apple Germplasm Resources. Tree Genetics & Genomes 2015 11:106 |
pub | genotype search (dataset name: Gao_Chinese_National_Repository_Apple_2015) |
| tfGDR1016 |
Leforestier et al. Genomic basis of the differences between cider and dessert apple varieties. Evolutionary applications. 2015 Aug; 8(7):650-61. |
pub | genotype search (dataset name: Dessert_and_cider_core_collections_8k_SNP)
|
| tfGDR1015 |
Nuñez-Lillo et al. Identification of candidate genes associated with mealiness and maturity date in peach [Prunus persica (L.) Batsch] using QTL analysis and deep sequencing. Tree Genetics & Genomes 2015, 11:86 |
pub |
| tfGDR1014 |
Guajardo et al. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
pub |
| tfGDR1013 |
Micheletti et al. Whole-Genome Analysis of Diversity and SNP-Major Gene Association in Peach Germplasm. PloS one. 2015; 10(9):e0136803. |
pub | project | peach SNP genotype data |
| tfGDR1012 |
Genetic analysis of the flowering date and number of petals in rose |
tfGDR1012(will be integrated to GDR when more marker data is received) |
| tfGDR1010 |
Donoso et al. High-density mapping suggests cytoplasmic male sterility with two restorer genes in almond × peach progenies. Horticulture Research 2015 2: 15016 |
pub |
| tfGDR1008 |
Kawamura et al. Inheritance of garden rose architecture and its association with flowering behaviour. Tree Genetics & Genomes 2015, 11:22 |
pub |
| N/A |
Bai Y, Dougherty L, Xu K. Towards an improved apple reference transcriptome using RNA-seq. Molecular genetics and genomics : MGG. 2014 Feb 16. |
project page |
| N/A |
Cachi and Wünsch. Characterization of self-compatibility in sweet cherry varieties by crossing experiments and molecular genetic analysis. Tree Genetics & Genomes 2014 10(5):1205-1212 |
pub | genotype search (dataset name: Wunsch_Sweet_Cherry_Self-compatibility_2014) |
| N/A |
Duval et al. High-resolution mapping of the RMia gene for resistance to root-knot nematodes in peach. Tree genetics & genomes. 2014; 10(2):297-306. |
pub |
| N/A |
Clark et al. A consensus ‘Honeycrisp’ apple (Malus × domestica) genetic linkage map from three full-sib progeny populations. Tree genetics & genomes. 2014; 10(3):627-639. |
pub |
| tfGDR1005 |
Torres-Hernández et al. Genetic variability in Malacomeles denticulata (Rosaceae) from central Mexico revealed with SSR markers. Genetic resources and crop evolution. 2013; 60(7):2191-2200. |
pub | genotype search (dataset name: Núñez-Colín_Malacomeles_SSR_2013) |
| tfGDR1004 |
Zhebentyayeva et al. Dissection of chilling requirement and bloom date QTLs in peach using a whole genome sequencing of sibling trees from an F mapping population. Tree Genetics & Genomes 2014 10(1)35 |
pub |
| tfGDR1003 |
Frett et al. Mapping quantitative trait loci associated with blush in peach [Prunus persica (L.) Batsch]. Tree Genetics & Genomes 2014 April, 10(2):367-381. |
pub |
| tfGDR1001 |
Yang et al. Mapping quantitative trait loci associated with resistance to bacterial spot (Xanthomonas arboricola pv. pruni) in peach. Tree Genetics & Genomes 2013 9:573-586 |
pub |
