Data Overview

 
 Genes : 1282508 genes and 1483655 mRNAs
SourceNumber of genesNumber of mRNA
Cerasus x yedoensis Somei-Yoshino Genome v1.0 Assembly & Annotation095076
Fragaria iinumae Genome v1.0 Assembly & Annotation2354023665
Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation6807368073
Fragaria vesca Whole Genome v1.1.a2 (Re-annotation of v1.1)064597
Fragaria vesca Whole Genome v4.0.a1 Assembly & Annotation2860828655
Fragaria vesca Whole Genome v4.0.a2 (Re-annotation of v4.0.a1)3400864597
Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1216174108087
GDR Gene Database77540
Malus baccata Genome v1.0 Assembly & Annotation045901
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation5274145116
Malus x domestica HFTH1 Whole Genome v1.04467744677
Malus x domestica Whole Genome v1.0 Assembly & Annotation063561
Malus x domestica Whole Genome v1.0p Assembly & Annotation3029430294
NCBI Rosaceae gene and mRNA sequences810221308
Potentilla micrantha Draft Genome v1.0 Assembly & Annotation3358533602
Prunus armeniaca Genome v1.0 Assembly & Annotation3043652096
Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)436730
Prunus domestica Draft Genome Assembly v1.0 & Annotation v1.0.a1130866138597
Prunus dulcis Lauranne Genome v1.0232640
Prunus dulcis Texas Genome v2.02704233119
Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)2687347089
Prunus persica Whole Genome v1.0 Assembly & Annotation2786428702
Prunus yedoensis var. nudiflora Genome v1.0 Assembly & Annotation4129441294
Pyrus betulifolia Genome v1.0 Assembly & Annotation5955259552
Pyrus bretschneideri ‘DangshanSuli’ Genome Assembly v1.14218046174
Pyrus communis Bartlett DH Genome v2.03744537445
Pyrus communis Genome v1.0 Draft Assembly & Annotation4521745217
Pyrus ussuriensis x communis Zhongai 1 v1.0 Whole Genome Assembly & Annotation4312043120
Rosa chinensis Old Blush homozygous genome v2.05038745469
Rosa chinensis Whole Genome v1.0 Assembly & Annotation4448139669
Rubus occidentalis Whole Genome Assembly v1.0 & Annotation v12800528005
Rubus occidentalis Whole Genome Assembly v1.1027612
Rubus occidentalis Whole Genome v3.0 Assembly & Annotation3325333286
 
 Genomes : 37 genome assemblies
Source
Cerasus x yedoensis Somei-Yoshino Genome v1.0 Assembly & Annotation
Fragaria iinumae Genome v1.0 Assembly & Annotation
Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation
Fragaria vesca Whole Genome v1.1.a2 (Re-annotation of v1.1)
Fragaria vesca Whole Genome v1.1 Assembly & Annotation
Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fragaria vesca Whole Genome v4.0.a1 Assembly & Annotation
Fragaria vesca Whole Genome v4.0.a2 (Re-annotation of v4.0.a1)
Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Malus baccata Genome v1.0 Assembly & Annotation
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Malus x domestica HFTH1 Whole Genome v1.0
Malus x domestica Whole Genome v1.0 Assembly & Annotation
Malus x domestica Whole Genome v1.0p Assembly & Annotation
Malus x domestica Whole Genome v3.0.a1 Assembly & Annotation
Potentilla micrantha Draft Genome v1.0 Assembly & Annotation
Prunus armeniaca Genome v1.0 Assembly & Annotation
Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)
Prunus domestica Draft Genome Assembly v1.0 & Annotation v1.0.a1
Prunus dulcis Lauranne Genome v1.0
Prunus dulcis Texas Genome v2.0
Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
Prunus persica Whole Genome v1.0 Assembly & Annotation
Prunus yedoensis var. nudiflora Genome v1.0 Assembly & Annotation
Pyrus betulifolia Genome v1.0 Assembly & Annotation
Pyrus bretschneideri ‘DangshanSuli’ Genome Assembly v1.1
Pyrus communis Bartlett DH Genome v2.0
Pyrus communis Genome v1.0 Draft Assembly & Annotation
Pyrus ussuriensis x communis Zhongai 1 v1.0 Whole Genome Assembly & Annotation
Rosa chinensis Old Blush homozygous genome v2.0
Rosa chinensis Old Blush Illumina genome v1.0
Rosa chinensis Whole Genome v1.0 Assembly & Annotation
Rosa multiflora Draft Genome v1.0 Assembly & Annotation
Rubus occidentalis Whole Genome Assembly v1.0 & Annotation v1
Rubus occidentalis Whole Genome Assembly v1.1
Rubus occidentalis Whole Genome v3.0 Assembly & Annotation
Rubus ulmifolius Burbank Thornless Whole Genome v1.0 Assembly
 
 Germplasm : 17261 germplasm
 
 Fragaria : 2915
Germplasm TypeNumber of germplasm
breeding_research_material1891
cultivar536
wild_unimproved468
population20
 
 Malus : 4137
Germplasm TypeNumber of germplasm
breeding_research_material2036
cultivar1041
wild_unimproved968
population92
 
 Prunus : 7863
Germplasm TypeNumber of germplasm
breeding_research_material4144
cultivar3393
wild_unimproved215
population111
 
 Pyrus : 2152
Germplasm TypeNumber of germplasm
cultivar1425
breeding_research_material441
wild_unimproved279
population7
 
 Rosa : 194
Germplasm TypeNumber of germplasm
cultivar172
population11
breeding_research_material9
wild_unimproved2
 
 Rubus : 1062
Germplasm TypeNumber of germplasm
cultivar415
wild_unimproved331
breeding_research_material308
population8
 
 Maps : 358 maps
GenusNumber of maps
Fragaria31
Malus118
Prunus177
Pyrus24
Rosa23
Rubus13
 
 Markers : 4093469 markers
 
 Fragaria : 637335
Marker TypeNumber of markers
SNP619473
Indel12044
EST-SSR4423
SSR994
DART131
AFLP110
dCAPS51
SSCP26
genetic marker25
EST22
gene marker15
STS9
SCAR5
EST marker5
RFLP1
GENE MARKER1
 
 Malus : 2614649
Marker TypeNumber of markers
SNP2606820
HaploBlock marker3433
SSR1590
AFLP977
DArT665
RAPD359
genetic marker161
EST-SSR159
EST158
RFLP129
gene marker31
Isozyme29
GENETIC MARKER24
SCAR22
PCR marker18
candidate gene marker14
DART12
RGA10
HRM10
EST marker9
SNP/indel7
CAPS7
SNP_TSP3
heritable phenotypic marker1
STS1
 
 Prunus : 474869
Marker TypeNumber of markers
Indel151479
CAPS131687
SSR94608
SNP79760
SLAF8862
InDel4900
AFLP1238
EST677
RFLP502
gene marker301
candidate gene marker261
RAPD143
EST-SSR133
genetic marker62
RAF39
ISSR37
SRAP32
isozyme31
SCAR24
LTR22
dCAPS19
IMA16
Isozyme12
STS9
overgo probe5
EST marker3
PCR marker3
heritable_phenotypic_marker1
PHENOTYPIC MARKER1
SNP/Indel1
SSLP1
 
 Pyrus : 291895
Marker TypeNumber of markers
SNP290052
SSR1141
AFLP683
IRAP8
STS5
Isozyme3
gene marker2
ISSR1
 
 Rosa : 74721
Marker TypeNumber of markers
SNP71106
AFLP2200
SSR621
CAPS234
NBS148
RAPD130
genetic marker102
RFLP53
gene marker49
RGA41
SSCP17
EST marker8
EST4
Marker4
SCAR2
heritable phenotypic marker2
 
 Rubus : 8743
Marker TypeNumber of markers
SNP7320
SSR579
AFLP529
candidate gene marker165
HRM115
gene marker18
EST-SSR16
genetic marker1
 
 Phenotypes : 382507 phenotypic measurements
SpeciesNumber of trait descriptorsNumber of phenotypic measurements
Fragaria bucharica512
Fragaria cascadensis27130
Fragaria chiloensis481477
Fragaria chinensis613
Fragaria corymbosa414
Fragaria daltoniana33
Fragaria gracilis22
Fragaria hybrid1241
Fragaria iinumae1227
Fragaria iturupensis314
Fragaria mandshurica22
Fragaria moschata45264
Fragaria moupinensis22
Fragaria nilgerrensis416
Fragaria nipponica514
Fragaria nubicola11
Fragaria orientalis722
Fragaria pentaphylla412
Fragaria sp.99198
Fragaria spp.1316
Fragaria tibetica33
Fragaria vesca1411026
Fragaria virginiana45742
Fragaria viridis1326
Fragaria x ananassa115129909
Fragaria x bifera710
Fragaria x bringhurstii22185
Fragaria x vescana1315
Malus floribunda1616
Malus sieversii1616
Malus x domestica257131393
Prunus americana1531
Prunus angustifolia414
Prunus argentea2740
Prunus armeniaca1421773
Prunus avium3717354
Prunus bokhariensis1722
Prunus bucharica816
Prunus canescens11
Prunus cerasifera23327
Prunus cerasus3416313
Prunus consociiflora12
Prunus davidiana18135
Prunus domestica28662
Prunus dulcis472783
Prunus fasciculata45
Prunus ferganensis1941
Prunus ferganica1721
Prunus hortulana22
Prunus hybrid91555
Prunus japonica58
Prunus kansuensis79
Prunus kuramica714
Prunus maackii11
Prunus mexicana48
Prunus mira39128
Prunus mume1111
Prunus nigra33
Prunus pedunculata893
Prunus persica6827390
Prunus petunnikowii736
Prunus rivularis89
Prunus salicina25236
Prunus simonii1618
Prunus spinosa8107
Prunus spp.75650
Prunus subcordata528
Prunus tangutica892
Prunus tenella728
Prunus texana33
Prunus triloba714
Prunus undulata11
Prunus webbii2787
Prunus x blireiana610
Prunus x dasycarpa917
Pyrus betulifolia441144
Pyrus calleryana461832
Pyrus communis4923902
Pyrus cordata43289
Pyrus cossonii42141
Pyrus dimorphophylla41483
Pyrus elaeagrifolia48345
Pyrus fauriei45724
Pyrus gharbiana40117
Pyrus glabra1434
Pyrus hondoensis46616
Pyrus hybrid503533
Pyrus koehnei39181
Pyrus korshinskyi11
Pyrus mamorensis43166
Pyrus pashia40362
Pyrus pseudopashia1722
Pyrus pyrifolia482497
Pyrus regelii2269
Pyrus sachokiana11
Pyrus salicifolia44152
Pyrus spinosa37275
Pyrus spp.48218
Pyrus syriaca2095
Pyrus ussuriensis491303
Pyrus x bretschneideri37335
Pyrus x canescens11
Pyrus x complexa24
Pyrus x nivalis44225
Pyrus x phaeocarpa3847
Pyrus x sinkiangensis18
Pyrus x uyematsuana3650
Rubus acanthophyllos11
Rubus adenotrichos33
Rubus allegheniensis725
Rubus alumnus22
Rubus amphidasys44
Rubus anglocandicans33
Rubus apetalus11
Rubus arcticus926
Rubus argutus2561
Rubus armeniacus822
Rubus assamensis44
Rubus axillaris3032
Rubus bambusarum33
Rubus bogotensis12
Rubus briareus12
Rubus buergeri44
Rubus caesius3193
Rubus canadensis2640
Rubus canescens2223
Rubus caucasicus2832
Rubus chamaemorus17
Rubus chingii46
Rubus cissoides11
Rubus clinocephalus611
Rubus cockburnianus67
Rubus columellaris34
Rubus conothyrsoides45
Rubus corchorifolius38
Rubus coreanus1226
Rubus corylifolius33
Rubus crataegifolius2555
Rubus cyri44
Rubus deliciosus33
Rubus distractiformis33
Rubus drejeri2324
Rubus echinatus11
Rubus ellipticus46
Rubus enslenii11
Rubus erythrops45
Rubus eustephanos1219
Rubus flagellaris513
Rubus floribundus38
Rubus flosculosus2137
Rubus formosensis55
Rubus geoides23
Rubus georgicus44
Rubus glabratus35
Rubus glabricarpus11
Rubus glandithyrsos11
Rubus glandulosus33
Rubus glaucus516
Rubus grabowskii2354
Rubus hartmanii44
Rubus hawaiensis47
Rubus henryi1010
Rubus hirsutus2150
Rubus hirtus3084
Rubus hispidus44
Rubus hoffmeisterianus47
Rubus humulifolius22
Rubus hunanensis44
Rubus hybrid331629
Rubus hypargyrus44
Rubus ichangensis33
Rubus idaeus433848
Rubus ikenoensis45
Rubus illecebrosus1922
Rubus innominatus1320
Rubus insularis44
Rubus irenaeus611
Rubus irritans11
Rubus kawakamii11
Rubus kennedyanus11
Rubus laciniatus2936
Rubus lambertianus1225
Rubus lasiococcus1727
Rubus lasiostylus2158
Rubus leucodermis27108
Rubus lindebergii11
Rubus lineatus11
Rubus macilentus44
Rubus macraei11
Rubus macvaughianus47
Rubus megalococcus11
Rubus mesogaeus33
Rubus microphyllus512
Rubus minusculus44
Rubus miszczenkoi33
Rubus moluccanus34
Rubus moschus11
Rubus mulleri46
Rubus neglectus35155
Rubus neomexicanus1724
Rubus nepalensis46
Rubus nessensis11
Rubus nivalis33
Rubus niveus410
Rubus nubigenus36
Rubus nutkanus27108
Rubus occidentalis34346
Rubus odoratus2133
Rubus orarius11
Rubus palmatus511
Rubus parvifolius27143
Rubus parvus33
Rubus pectinellus47
Rubus pedatus510
Rubus pensilvanicus33
Rubus pentalobus55
Rubus phoenicolasius1324
Rubus plicatus2829
Rubus polyanthemos11
Rubus praecox22
Rubus pseudojaponicus33
Rubus pubescens45
Rubus pungens1518
Rubus pyramidalis33
Rubus rigidus1414
Rubus riograndis11
Rubus roseus33
Rubus rosifolius510
Rubus rugosus44
Rubus sachalinensis713
Rubus sanctus512
Rubus saxatilis55
Rubus schmidelioides34
Rubus separinus45
Rubus setchuenensis49
Rubus shankii2432
Rubus sieboldii11
Rubus simplex99
Rubus slesvicensis2989
Rubus spectabilis2588
Rubus spp.28113
Rubus squarrosus67
Rubus sumatranus1718
Rubus swinhoei33
Rubus taiwanicola33
Rubus tephrodes512
Rubus thibetanus44
Rubus trianthus44
Rubus tricolor33
Rubus trifidus1720
Rubus trivialis2791
Rubus tsangiorum44
Rubus tuberculatus11
Rubus ulmifolius2468
Rubus ursinus32148
Rubus urticifolius35
Rubus vermontanus11
Rubus vernus11
Rubus vestitus11
Rubus vigorosus11
Rubus wahlbergii2830
Rubus wallichianus33
Rubus x loganobaccus2861
 
 Publications : 8269 publications
 
 QTL : 3949 QTL and 108 MTL for 403 agronomic traits
 
 Fragaria 507 QTL 5 MTL for 125 traits
Trait CategoryNumber of QTLsNumber of MTLs
1-decanol content80
1-hexanol content10
1-methylbutyl butanoate content20
1-methylhexyl acetate content10
1-methyloctyl butanoate content30
1-octanol content120
1-penten-3-ol content20
1-penten-3-one content60
2,1-pentenyl furan content10
2,3-butanedioldi acetate content10
2-decenal content40
2-heptanol content10
2-heptanone content10
2-heptenal content60
2-hexen-1-ol content30
2-hexenal content10
2-hexenyl acetate content10
2-methylbutyl acetate content50
2-nonanol content30
2-nonanone content40
2-nonenal content10
2-octenal content30
2-pentanone content10
2-pentenal content30
2-pentylfuran content20
2-tridecanol content10
2-undecanol content30
3-hexenal content10
3-hexenyl acetate content10
3-methyl-2-butenyl acetate content20
3-methylbutyl acetate content100
6-methyl-5-hepten-2-one content60
acetone content20
acetophenone content40
alpha farnesene content20
alpha ionone content10
alpha pinene content10
anthocyanin content90
benzaldehyde content20
benzyl acetate content110
beta ionone content10
butyl acetate content70
butyl butanoate content80
butyl hexanoate content100
cinnamyl acetate content70
citric acid content60
day neutrality80
decanal content10
decyl acetate content90
ethanol content10
ethyl 2-hexenoate content10
ethyl acetate content10
ethyl butanoate content10
ethyl decanoate content40
ethyl dodecanoate content20
ethyl hexanoate content20
ethyl methylthioacetate content10
eugenol content50
Female fertility12
fructose content20
fruit color60
fruit diameter40
fruit diameter to length ratio50
fruit dry weight30
fruit firmness90
fruit length70
fruit number60
fruit set30
fruit skin color140
fruit weight60
gamma-decalactone content60
gamma-dodecalactone content50
glucose content50
heptanal content10
heptanol content10
hexanal content10
hexanol content20
hexyl acetate content30
hexyl butanoate content20
hexyl hexanoate content20
L-Ascorbic acid content60
limonene content10
linalool content60
male sterility12
malic acid content40
mesifurane content70
methyl 2-aminobenzoate content20
methyl 2-hexenoate content10
methyl 3-hydroxyoctanoate content10
methyl benzoate content100
methyl butanoate content20
methyl cinnamate content10
methyl decanoate content60
methyl dodecanoate content40
methyl hexanoate content60
methyl octanoate content40
methyl pentanoate content70
myrtenol content60
myrtenyl acetate content40
nerol content30
nerolidol content60
nonanal content10
nonyl acetate content40
octanal content10
octyl acetate content70
octyl butanoate content70
octyl hexanoate content90
pentyl acetate content10
perpetual flowering20
PH90
plant height40
plant width30
propyl butanoate content20
resistance to Colletotrichum acutatum50
resistance to Fusarium oxysporum f. sp. fragariae20
resistance to Gloeosporium and Colletotrichum species10
resistance to Phytophthora cactorum50
resistance to powdery mildew120
ripening time60
sucrose content20
terpineol content110
titratable acidity110
total water soluble content70
vernalization requirement01
yield trait60
 
 Malus 1602 QTL 37 MTL for 149 traits
Trait CategoryNumber of QTLsNumber of MTLs
2-methyl butyl acetate content30
3-octanol content10
allylanisol content40
alpha farnesene content50
base diameter20
base diameter increment80
basis angle of long sylleptic axillary shoots10
beta damascenone content20
bitter pit20
bloom date180
branch number20
butanol content20
butyl 2-methyl butanoate content20
butyl acetate content30
butyl butanoate content40
butyl hexanoate content10
catechin content140
chilling injury resistance20
chlorogenic acid content60
cord bending of long sylleptic axillary shoots20
cyanidin 3-O-arabinoside content50
date of budbreak20
date of green point190
dehydroascorbate content in fruit flesh30
dry matter content330
epicatechin content160
ethylene production40
flesh browning rate220
flowering date20
foliar dehydroascorbate content20
foliar glutathione concentration40
foliar L-ascorbic acid content10
foliar oxidized GSH content40
fructose content120
fruit circumference40
fruit color70
fruit crispness80
fruit crunchiness20
fruit diameter260
fruit fibrousness30
fruit firmness170
fruit firmness after storage510
fruit firmness at harvest380
fruit firmness of shaded side of the fruit100
fruit firmness of the sunny side of the fruit70
fruit graininess30
fruit hardness100
fruit height90
fruit juiciness90
fruit length160
fruit mealiness60
fruit meltiness50
fruit number10
fruit russet140
fruit shape200
fruit size130
fruit skin color30
fruit stiffness80
fruit texture2340
fruit weight290
gametophytic incompatibility01
glucose content160
growth rate40
harvest date630
harvest index90
heptanol content10
hexanol content60
hexyl acetate content40
hexyl butanoate content30
hexyl hexanoate content50
internode length120
internode number70
Iso-pentanol content20
juice browning60
juvenile phase length20
L-ascorbic acid content in fruit flesh180
leaf break80
leaf color01
length of the longest internode of long sylleptic axillary shoots20
length of the longest internode of the trunk10
loss of firmness during storage380
malic acid content30
mean internode length of long sylleptic axillary shoots10
mesocarp color01
number of axillary shoots40
number of brindles10
number of flower bunches20
number of latents buds on the trunk20
number of long shoots20
number of spurs20
O-methyl transferase activity10
p-coumaroyl quinic acid content200
pentanol content10
pentyl acetate content20
percentage of long shoots10
phenolic compound content1090
phloridzin-xyloside content10
plant height increment240
plant surface10
plant volume10
preharvest fruit drop20
procyanidin B2 content110
propyl acetate content20
propyl hexanoate content10
quercetin 3-O-arabinofuranoside content10
quercetin 3-O-glucoside content20
quercetin 3-O-rutinoside content20
quercetin 3-O-xyloside content10
resistance to Agrobacterium tumefaciens01
resistance to Botryosphaeria dothidea621
resistance to Dysaphis cf. devecta40
resistance to Dysaphis plantaginea51
resistance to Erwinia amylovora511
resistance to Penicillium expansum20
resistance to powdery mildew360
resistance to Venturia inaequalis638
ripening time20
rooting rate30
rootstock-induced dwarfing30
russet-calyx20
russet-pedicel40
seedling leaf size20
seedling stem diameter40
skin_color01
soft scald50
soggy breakdown40
sorbitol content130
stem diameter150
stem length50
stem node number70
stomatal conductance50
sucrose content140
sugar content70
sugar content of shaded side of the fruit70
sugar content of the sunny side of the fruit80
time of initial vegetative budbreak270
titratable acidity60
total acidity180
total growth increment60
total water soluble content130
transpiration rate60
tree growth morphology01
unbranched upper zone of trunk10
unknown procyanidin oligomer 1 content40
unknown procyanidin oligomer 2 content40
unknown procyanidin oligomer 3 content30
unknown procyanidin oligomer 4 content50
unknown procyanidin oligomer 5 content60
volatile organic compounds content530
 
 Prunus 1515 QTL 39 MTL for 146 traits
Trait CategoryNumber of QTLsNumber of MTLs
abnormal growth after insufficient stratification10
amygdalin hydrolase activity30
annual trunk net growth30
anther color01
anthocyanin content30
ATPphosphofructokinase activity50
bloom date1190
broomy growth habit11
chilling injury resistance530
chilling requirement1280
citrate content70
citric acid content70
date of budbreak30
days to maturity180
double flower01
ecodormancy release date40
endodormancy release date50
evergrowing01
firmness loss280
flavonoid content50
flesh adhesion141
flesh color around the stone71
flower color22
flowering date500
flowering time100
flower shape02
fresh weight30
fructokinase activity160
fructose-1,6-bisphosphatase activity30
fructose content350
fruit chewiness40
fruit cohesiveness40
fruit color30
Fruit depth180
fruit development period90
fruit diameter50
fruit firmness170
fruit flavor trait10
fruit fresh weight170
fruit gumminess60
fruit hairiness01
fruit hardness80
fruit height110
fruit resilience20
fruit ripening trait40
fruit shape31
fruit skin color191
fruit springiness20
fruit texture70
fruit weight600
Fruit width180
gametophytic incompatibility43
germination date50
glucose content300
glucosyltransferase activity trait30
heat requirement170
heat requirement for blooming20
heat requirement for ecodormancy release40
hexokinase activity150
hybrid incompatibility01
internode length30
kernel diameter20
kernel length40
kernel spherical index10
kernel taste31
kernel thickness30
kernel weight10
kernel width20
late blooming41
leaf area20
leaf color21
leaf gland01
leaf length40
leaf shape71
leaf vein density50
leaf vein number60
leaf width50
linoleic acid content20
malate content130
male sterility01
malic acid content80
mandelonitrile lyase activity20
mesocarp color312
nematode damage resistance01
neutral invertase activity20
non-acid fruit01
nut diameter20
nut length40
nut size20
nut spherical index40
nut thickness30
nut weight20
nut width30
oleic acid content20
palmitic acid content20
palmitoleic acid content40
period of time between endodormancy and ecodormancy release20
period of time between endodormancy release and blooming50
petiole length30
PH90
phenolic compound content30
phosphoglucomutase activity70
pistil death20
plant height11
pollen germination20
polycarpel01
protein content20
prunasin hydrolase activity40
quinic acid content10
red skin pigmentation90
relative antioxidant capacity30
resistance to Dysaphis cf. devecta320
resistance to Meloidogyne arenaria61
resistance to Meloidogyne incognita32
resistance to Meloidogyne javanica01
resistance to Monilinia fructicola310
resistance to Myzus persicae91
resistance to peach tree short life syndrome90
resistance to plum pox virus362
resistance to powdery mildew871
resistance to Pseudomonas syringae pv. Syringae70
resistance to Xanthomonas arboricola pv. Pruni130
restistance to Candidatus Phytoplasma pruni40
ripening time631
seed set number30
seed size10
shell hardness61
sorbitol content200
sorbitol oxidase activity20
stearic acid content50
stem diameter30
stem length20
stem taper50
stratification requirement20
sucrose content330
sugar content40
titratable acidity120
tocopherol homologues content50
total acidity90
total branch number20
total fat content20
total water soluble content500
tree shape30
trunk diameter120
UDP-glucose pyrophosphorylase activity70
yield trait30
 
 Pyrus 47 QTL 3 MTL for 16 traits
Trait CategoryNumber of QTLsNumber of MTLs
fruit color40
fruit juiciness20
fruit seed number60
fruit skin texture20
fruit transverse diameter30
fruit vertical diameter30
fruit weight20
gametophytic incompatibility01
leaf color01
mesocarp color20
pedicel length30
resistance to Cacopsylla pyri110
resistance to Venturia nashicola01
russet-calyx20
scab resistance40
total water soluble content30
 
 Rosa 168 QTL 17 MTL for 31 traits
Trait CategoryNumber of QTLsNumber of MTLs
anther color01
bloom date10
chlorophyll content80
days to flowering20
double flower02
flower color02
flower size40
gametophytic incompatibility01
geranyl acetate content02
growth rate100
internode length10
internode number80
leaf area80
leaf dry weight100
leaf size50
nerol content01
neryl acetate content01
perpetual flowering01
petal number22
plant height50
presence of prickles31
prickles on the petiole01
resistance to Diplocarpon rosae01
resistance to powdery mildew511
shoot dry weight100
shoot habit60
specific leaf area80
stem angle20
stem diameter100
stem dry weight80
stem length60
 
 Rubus 110 QTL 7 MTL for 32 traits
Trait CategoryNumber of QTLsNumber of MTLs
caffeic acid glucoside content40
caffeic acid unknown content20
cane pubescence01
catechin unknown content30
chilling requirement70
cyanidin 3-O-2G-glucosylrutinoside content90
cyanidin 3-O-2G-xylosylrutinoside content30
cyanidin 3-O-2G-xylosylrutinoside & cyanidin 3-O-rutinoside content40
cyanidin 3-O-glucoside content30
cyanidin 3-O-glucoside & cyanidin 3-O-sambubioside content50
cyanidin 3-O-rutinoside content50
cyanidin 3-O-sophoroside content110
floricane fruiting01
fruit color20
fruit length10
fruit shape10
fruit size10
fruit texture130
fruit weight40
p-coumaric glucoside content60
pelargonidin 3-O-glucoside content20
pelargonidin 3-O-glucosylrutinoside content30
pelargonidin 3-O-rutinoside content60
petal color20
plant height01
presence of prickles22
quercetin 3-O-rutinoside content20
quercetin glucoside content20
quercetin glucuronide content30
quercetin unknown content40
resistance to Amphorophora agathonica01
resistance to large raspberry aphid01
 
 SNP Genotype : 27943 markers 17497167 genotypic measurements
Species TypeNumber of markersNumber of genotypic measurements
Prunus persica62779943495
Prunus armeniaca953515
Rosaceae Family Genera sp.5362144
Fragaria x ananassa105513087769
Malus x domestica47962144304
Prunus avium49141885750
Prunus cerasus765427552
Fragaria iinumae92638
 
 SSR Genotype : 5041 markers 18620 genotypic measurements
Species TypeNumber of markersNumber of genotypic measurements
Malus x domestica400014561
Prunus armeniaca14218
Prunus avium3651219
Prunus cerasus164560
Prunus dulcis13
Prunus persica44899
Prunus salicina153
Pyrus pyrifolia227
Pyrus sp.229
Rosaceae Family Genera sp.4481051
Total504118620
 
 Species : 2050 species
GenusNumber of species
Acaena24
Adenostoma1
Agrimonia4
Alchemilla99
Amelanchier31
Amygdalus6
Aphanes4
Arabidopsis1
Aremonia1
Argentina6
Aria3
Armeniaca1
Aronia4
Aruncus2
Bencomia4
Cerasus1
Cercocarpus2
Chaenomeles3
Chamaebatia1
Chamaebatiaria1
Chamaecallis1
Chamaemeles1
Chamaemespilus1
Chamaerhodos4
Cliffortia149
Coluria2
Comarum2
Cormus1
Cotoneaster64
Crataegus104
Cydonia1
Dasiphora4
Dendriopoterium2
Dichotomanthes1
Docynia2
Docyniopsis1
Dryas5
Drymocallis5
Duchesnea1
Eriobotrya12
Eriolobus1
Exochorda2
Fallopia1
Fallugia1
Filipendula2
Fragaria54
Geum26
Gillenia2
Hagenia1
Hesperomeles2
Heteromeles1
Holodiscus2
Horkelia5
Horkeliella1
Ivesia11
Kageneckia2
Kerria2
Lachemilla4
Leucosidea1
Lindleya1
Luetkea1
Lyonothamnus3
Malacomeles1
Maleae1
Malus110
Marcetella2
Margyricarpus3
Mespilus2
Neillia12
Neviusia1
null1
Oemleria1
Osteomeles3
Pentactina1
Peraphyllum1
Petrophytum2
Photinia28
Physocarpus7
Pisum1
Polylepis22
Potaninia1
Potentilla118
Poterium1
Prinsepia4
Prunus276
Prunus (and Cerasus)1
Pseudocydonia1
Purshia1
Pygeum8
Pyracantha5
Pyronia1
Pyrus51
Rhaphiolepis2
Rhodotypos1
Rosa217
Rosaceae2
Rosaceae Family Genera1
Rubus339
Sanguisorba11
Sarcopoterium1
Sibbaldia5
Sibbaldianthe2
Sibbaldiopsis1
Sibiraea4
Sieversia2
Solanum1
Sorbaria5
Sorbus40
Spenceria1
Spiraea48
Stranvaesia4
synthetic1
Taihangia1
Torminalis2
Vauquelinia2
Waldsteinia1
Xerospiraea1
 
 Transcripts
SourceNumber of features
No records found.