Data Overview

 
 Genes : 6178722 genes and 6690190 mRNAs
SourceNumber of genesNumber of mRNA
Arabidopsis thaliana Araport113324352177
Cerasus x kanzakura cv. 'Atami-zakura' Whole Genome v1.0 Assembly & Annotation6952869528
Cerasus x kanzakura cv. 'Kawazu-zakura' Whole Genome v1.0 Assembly & Annotation727020
Cerasus x yedoensis Somei-Yoshino Genome v1.0 Assembly & Annotation095076
Crataegus pinnatifida var. major Genome v1.0 Assembly & Annotation4057140571
Eriobotrya japonica Genome v1.0 Assembly & Annotation4549245492
Fragaria chiloensis 'GP33' Genome v1.0 Assembly & Annotation98730115741
Fragaria chiloensis KIB CAS Genome v1.0 Assembly & Annotation192589193295
Fragaria daltoniana YNU Genome v1.0 Assembly & Annotation2813128131
Fragaria iinumae Genome v1.0 Assembly & Annotation2354023665
Fragaria mandshurica YNU Genome v1.0 Assembly & Annotation2541125411
Fragaria nilgerrensis Genome v1.0 Assembly & Annotation2878057560
Fragaria nilgerrensis SCBG Genome v1.0 Assembly & Annotation2906829068
Fragaria nilgerrensis YNU Genome v1.0 Assembly & Annotation2449124491
Fragaria nipponica KIB CAS Genome v1.0 Assembly & Annotation3605936136
Fragaria nubicola SCBG Genome v1.0 Assembly & Annotation2759427595
Fragaria pentaphylla YNU Genome v1.0 Assembly & Annotation2385323853
Fragaria vesca (CFRA 2339) Whole Genome v1.0 Assembly & Annotation3034933474
Fragaria vesca ‘Hawaii 4’ NAU Whole Genome v1.0 Assembly & Annotation3617336173
Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation6807368073
Fragaria vesca Whole Genome v1.1.a2 (Re-annotation of v1.1)064597
Fragaria vesca Whole Genome v4.0.a1 Assembly & Annotation2860828655
Fragaria vesca Whole Genome v4.0.a2 (Re-annotation of v4.0.a1)3400864597
Fragaria vesca ‘Yellow Wonder’ Genome v1.0 Assembly & Annotation3400664405
Fragaria virginiana KIB CAS Genome v1.0 Assembly & Annotation188437189167
Fragaria viridis SCBG Genome v1.0 Assembly & Annotation2619926199
Fragaria viridis YNU Genome v1.0 Assembly & Annotation2477924779
Fragaria x ananassa Benihoppe Genome v1.0 Assembly & Annotation109320109320
Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1108087108087
Fragaria x ananassa Camarosa Genome v1.0.a2 (Re-annotation of v1.0.a1)108447127746
Fragaria x ananassa FL15.89-25 Genome v1.0 Assembly & Annotation199419199419
Fragaria x ananassa Royal Royce Genome v1.0 Assembly & Annotation101793101793
Fragaria x ananassa Yanli Genome v1.0 Assembly & Annotation207310207310
GDR Gene Database499850
Gillenia trifoliata Whole Genome v1.0 Assembly & Annotation2884730259
Malus baccata Genome v1.0 Assembly & Annotation045901
Malus fusca Genome v1.1 Assembly & Annotation 9180992475
Malus prunifolia Fupingqiuzi Genome v1.0 Assembly & Annotation4499756490
Malus sieversii Diploid Consensus Whole Genome v1.0 Assembly & Annotation9014790147
Malus sieversii Haploid Consensus Whole Genome v1.0 Assembly & Annotation4521045210
Malus sylvestris Diploid Consensus Whole Genome v1.0 Assembly & Annotation9019390193
Malus sylvestris Haploid Consensus Whole Genome v1.0 Assembly & Annotation4519945199
Malus x domestica Antonovka 172670-B Whole Genome v1.0 Assembly & Annotation9016990199
Malus x domestica cv. Gala Diploid Consensus Whole Genome v1.0 Assembly & Annotation9050790507
Malus x domestica cv. Gala Haploid Consensus Whole Genome v1.0 Assembly & Annotation4535245352
Malus x domestica 'Fuji' Whole Genome v1.0.a2 Assembly & Annotation9869998699
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation5274145116
Malus x domestica Genome v1.0 NCBI annotation5742360511
Malus x domestica Golden Delicious Genome NCBI annotation4166352037
Malus x domestica 'Hanfu' Whole Genome v1.0 Assembly & Annotation3961739617
Malus x domestica HFTH1 Whole Genome v1.04467744677
Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation96218102100
Malus x domestica 'M9' Whole Genome v1.0.a2 Assembly & Annotation9966299662
Malus x domestica 'MM106' Whole Genome v1.0.a2 Assembly & Annotation100652100652
Malus x domestica Whole Genome v1.0 Assembly & Annotation063561
Malus x domestica Whole Genome v1.0p Assembly & Annotation3029430294
NCBI Rosaceae gene and mRNA sequences5159256592
Potentilla anserina Genome v1.0 Assembly & Annotation4649546495
Potentilla micrantha Draft Genome v1.0 Assembly & Annotation3358533602
Prunus armeniaca cv.Stella Whole Genome v1.0 Assembly & Annotation3823740960
Prunus armeniaca Genome v1.0 Assembly & Annotation3043652096
Prunus armeniaca Longwangmao Whole Genome v1.0 Assembly & Annotation6597453542
Prunus armeniaca Marouch n14 Whole Genome v1.0 Assembly & Annotation3752140067
Prunus armeniaca Sungold Whole Genome v1.0 Assembly & Annotation3266952172
Prunus armeniaca Yinxiangbai Genome v1.0 Assembly & Annotation2921129211
Prunus avium Big Star Genome v1.0 Assembly & Annotation2948750482
Prunus avium Regina Genome v1.0 Assembly & Annotation4813348133
Prunus avium Tieton Genome v1.0 Assembly & Annotation3043930975
Prunus avium Tieton Genome v2.0 Assembly & Annotation3998442045
Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)436730
Prunus campanulata Genome v1.0 Assembly & Annotation2486124861
Prunus cerasus cv. 'Montmorency' Whole Genome v1.0.a1 Assembly & Annotation9725497254
Prunus cerasus cv. 'Montmorency' Whole Genome v1.0.a2 Assembly & Annotation9738297385
Prunus davidiana Whole Genome v1.0 Assembly & Annotation2240326527
Prunus davidiana Whole Genome v2.0 Assembly & Annotation2723627236
Prunus domestica Draft Genome Assembly v1.0 & Annotation v1.0.a1130866138597
Prunus dulcis Lauranne Genome v1.0232640
Prunus dulcis Nonpareil Genome v1.0 Assembly & Annotation4492344962
Prunus dulcis Texas Genome v2.02704233119
Prunus dulcis Texas Genome v3.0 Assembly & Annotation5929558805
Prunus ferganensis Whole Genome v1.0 Assembly & Annotation2259227431
Prunus ferganensis Whole Genome v2.0 Assembly & Annotation2858728587
Prunus fruticosa 27e12(2) Whole Genome v1.0 Assembly & Annotation102377102378
Prunus humilis Genome v1.0 Assembly & Annotation2830128301
Prunus kansuensis Whole Genome v1.0 Assembly & Annotation2232926297
Prunus kansuensis Whole Genome v2.0 Assembly & Annotation2698626986
Prunus mandshurica CH264_4 Whole Genome v1.0 Assembly & Annotation3902141386
Prunus mira Whole Genome v1.0 Assembly & Annotation2228026958
Prunus mira Whole Genome v2.0 Assembly & Annotation2851928519
Prunus mongolica Whole Genome v1.0 Assembly & Annotation2379823798
Prunus mume Tortuosa Genome v1.0 Assembly & Annotation029706
Prunus persica 124 Pan Genome v1.0 Assembly & Annotation2515525155
Prunus persica Chinese Cling Whole Genome v1.0 Assembly & Annotation2633526335
Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)2687347089
Prunus persica Whole Genome v1.0 Assembly & Annotation2786428702
Prunus persica Zhongyoutao 14 Genome v1.0 Assembly & Annotation3018135389
Prunus salicina Lindl cv. Wushancuili Genome v1.0 Assembly & Annotation2530425304
Prunus salicina Sanyueli FAAS Whole Genome v1.0 Assembly & Annotation2971429714
Prunus salicina Sanyueli Whole Genome v2.0 Assembly & Annotation2444824448
Prunus salicina Zhongli No. 6 Whole Genome v1.0 Assembly & Annotation027481
Prunus sibirica CH320_5 Whole Genome v1.0 Assembly & Annotation4374146196
Prunus sibirica F106 Whole Genome v1.0 Assembly & Annotation3295953021
Prunus yedoensis var. nudiflora Genome v1.0 Assembly & Annotation4129441294
Pyrus betulifolia Genome v1.0 Assembly & Annotation5955259552
Pyrus bretschneideri ‘DangshanSuli’ Genome Assembly v1.14218046174
Pyrus communis Bartlett DH Genome v2.03744537445
Pyrus communis d'Anjou draft Genome v1.0 Assembly & Annotation4598145981
Pyrus communis d'Anjou Genome v2.3.a1 Assembly & Annotation8890789400
Pyrus communis Genome v1.0 Draft Assembly & Annotation4521745217
Pyrus pyrifolia Cuiguan Whole Genome v1.0 Assembly & Annotation4262242622
Pyrus pyrifolia Whole Genome v1.0 Assembly & Annotation448760
Pyrus ussuriensis x communis Zhongai 1 v1.0 Whole Genome Assembly & Annotation4312043120
Rosa chinensis Old Blush homozygous genome v2.05038745469
Rosa chinensis Whole Genome v1.0 Assembly & Annotation4448139669
Rosa rugosa Whole Genome v1.0 Assembly & Annotation3970439704
Rosa wichuraiana Basye's Thornless Genome v1.0 Assembly & Annotation3267432674
Rubus argutus Hillquist Genome v1.0 Assembly & Annotation3850340397
Rubus chingii Hu Whole Genome v1.0 Assembly & Annotation3199431994
Rubus idaeus Anitra Genome v1.0 Assembly & Annotation4817696352
Rubus idaeus cv. 'Autumn Bliss' NIAB Genome v1.0 Assembly & Annotation3910741799
Rubus idaeus cv. 'Malling Jewel' NIAB Genome v1.0 Assembly & Annotation3793640491
Rubus idaeus 'Joan J' Genome v2.0 Assembly & Annotation3513157192
Rubus occidentalis Whole Genome Assembly v1.0 & Annotation v12800528005
Rubus occidentalis Whole Genome Assembly v1.1027612
Rubus occidentalis Whole Genome v3.0 Assembly & Annotation3325333286
 
 Genomes : 142 genome assemblies
Source
Arabidopsis thaliana Araport11
Cerasus speciosa IZO01 Genome v1.0 Assembly and Annotation
Cerasus x kanzakura cv. 'Atami-zakura' Whole Genome v1.0 Assembly & Annotation
Cerasus x kanzakura cv. 'Kawazu-zakura' Whole Genome v1.0 Assembly & Annotation
Cerasus x yedoensis Somei-Yoshino Genome v1.0 Assembly & Annotation
Crataegus pinnatifida var. major Genome v1.0 Assembly & Annotation
Eriobotrya japonica Genome v1.0 Assembly & Annotation
Fragaria chiloensis 'GP33' Genome v1.0 Assembly & Annotation
Fragaria chiloensis KIB CAS Genome v1.0 Assembly & Annotation
Fragaria daltoniana YNU Genome v1.0 Assembly & Annotation
Fragaria iinumae Genome v1.0 Assembly & Annotation
Fragaria mandshurica YNU Genome v1.0 Assembly & Annotation
Fragaria moupinensis haplotype Genome v1.0 Assembly & Annotation
Fragaria nilgerrensis Genome v1.0 Assembly & Annotation
Fragaria nilgerrensis SCBG Genome v1.0 Assembly & Annotation
Fragaria nilgerrensis YNU Genome v1.0 Assembly & Annotation
Fragaria nipponica KIB CAS Genome v1.0 Assembly & Annotation
Fragaria nubicola SCBG Genome v1.0 Assembly & Annotation
Fragaria pentaphylla YNU Genome v1.0 Assembly & Annotation
Fragaria vesca (CFRA 2339) Whole Genome v1.0 Assembly & Annotation
Fragaria vesca ‘Hawaii 4’ NAU Whole Genome v1.0 Assembly & Annotation
Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation
Fragaria vesca Whole Genome v1.1.a2 (Re-annotation of v1.1)
Fragaria vesca Whole Genome v1.1 Assembly & Annotation
Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fragaria vesca Whole Genome v4.0.a1 Assembly & Annotation
Fragaria vesca Whole Genome v4.0.a2 (Re-annotation of v4.0.a1)
Fragaria vesca Whole Genome v4.0.a2 (Re-annotation of v4.0.a1, Synteny)
Fragaria vesca ‘Yellow Wonder’ Genome v1.0 Assembly & Annotation
Fragaria virginiana KIB CAS Genome v1.0 Assembly & Annotation
Fragaria viridis SCBG Genome v1.0 Assembly & Annotation
Fragaria viridis YNU Genome v1.0 Assembly & Annotation
Fragaria x ananassa Benihoppe Genome v1.0 Assembly & Annotation
Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fragaria x ananassa Camarosa Genome v1.0.a2 (Re-annotation of v1.0.a1)
Fragaria x ananassa FL15.89-25 Genome v1.0 Assembly & Annotation
Fragaria x ananassa FL 16.33-8 Genome v1.0 Assembly & Annotation
Fragaria x ananassa FL 20.82-27 Genome v1.0 Assembly & Annotation
Fragaria x ananassa 'Florida Brilliance' Genome v1.0 Assembly & Annotation
Fragaria x ananassa Royal Royce Genome v1.0 Assembly & Annotation
Fragaria x ananassa Yanli Genome v1.0 Assembly & Annotation
Gillenia trifoliata Whole Genome v1.0 Assembly & Annotation
Malus angustifolia Genome v1.0 Assembly & Annotation
Malus baccata Genome v1.0 Assembly & Annotation
Malus fusca Genome v1.1 Assembly & Annotation
Malus prunifolia Fupingqiuzi Genome v1.0 Assembly & Annotation
Malus sieversii Diploid Consensus Whole Genome v1.0 Assembly & Annotation
Malus sieversii Haploid Consensus Whole Genome v1.0 Assembly & Annotation
Malus sylvestris Diploid Consensus Whole Genome v1.0 Assembly & Annotation
Malus sylvestris Haploid Consensus Whole Genome v1.0 Assembly & Annotation
Malus x domestica Antonovka 172670-B Whole Genome v1.0 Assembly & Annotation
Malus x domestica cv. Gala Diploid Consensus Whole Genome v1.0 Assembly & Annotation
Malus x domestica cv. Gala Haploid Consensus Whole Genome v1.0 Assembly & Annotation
Malus x domestica 'Fuji' Whole Genome v1.0.a2 Assembly & Annotation
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Malus x domestica Genome v1.0 NCBI annotation
Malus x domestica Golden Delicious FEM v1.0
Malus x domestica Golden Delicious GDT2T Genome v1.0 Assembly & Annotation
Malus x domestica Golden Delicious Genome NCBI annotation
Malus x domestica 'Hanfu' Whole Genome v1.0 Assembly & Annotation
Malus x domestica HFTH1 Whole Genome v1.0
Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation
Malus x domestica 'M9' Whole Genome v1.0.a2 Assembly & Annotation
Malus x domestica 'MM106' Whole Genome v1.0.a2 Assembly & Annotation
Malus x domestica WA 38 Genome v1.0 Assembly & Annotation
Malus x domestica Whole Genome v1.0 Assembly & Annotation
Malus x domestica Whole Genome v1.0p Assembly & Annotation
Malus x domestica Whole Genome v3.0.a1 Assembly & Annotation
Potentilla anserina Genome v1.0 Assembly & Annotation
Potentilla micrantha Draft Genome v1.0 Assembly & Annotation
Prunus armeniaca cv.Stella Whole Genome v1.0 Assembly & Annotation
Prunus armeniaca Genome v1.0 Assembly & Annotation
Prunus armeniaca Longwangmao Whole Genome v1.0 Assembly & Annotation
Prunus armeniaca Marouch n14 Whole Genome v1.0 Assembly & Annotation
Prunus armeniaca Sungold Whole Genome v1.0 Assembly & Annotation
Prunus armeniaca Yinxiangbai Genome v1.0 Assembly & Annotation
Prunus avium Big Star Genome v1.0 Assembly & Annotation
Prunus avium Regina Genome v1.0 Assembly & Annotation
Prunus avium Tieton Genome v1.0 Assembly & Annotation
Prunus avium Tieton Genome v2.0 Assembly & Annotation
Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)
Prunus campanulata Genome v1.0 Assembly & Annotation
Prunus cerasus cv. 'Montmorency' Whole Genome v1.0.a1 Assembly & Annotation
Prunus cerasus cv. 'Montmorency' Whole Genome v1.0.a2 Assembly & Annotation
Prunus conradinae Whole Genome v1.0 Assembly & Annotation
Prunus davidiana Whole Genome v1.0 Assembly & Annotation
Prunus davidiana Whole Genome v2.0 Assembly & Annotation
Prunus davidiana ZXST Haplotype Genome v1.0 Assembly & Annotation
Prunus domestica Draft Genome Assembly v1.0 & Annotation v1.0.a1
Prunus dulcis Lauranne Genome v1.0
Prunus dulcis Nonpareil Genome v1.0 Assembly & Annotation
Prunus dulcis Texas Genome v2.0
Prunus dulcis Texas Genome v3.0 Assembly & Annotation
Prunus ferganensis Whole Genome v1.0 Assembly & Annotation
Prunus ferganensis Whole Genome v2.0 Assembly & Annotation
Prunus fruticosa 27e12(2) Whole Genome v1.0 Assembly & Annotation
Prunus humilis Genome v1.0 Assembly & Annotation
Prunus kansuensis Whole Genome v1.0 Assembly & Annotation
Prunus kansuensis Whole Genome v2.0 Assembly & Annotation
Prunus mandshurica CH264_4 Whole Genome v1.0 Assembly & Annotation
Prunus mira Whole Genome v1.0 Assembly & Annotation
Prunus mira Whole Genome v2.0 Assembly & Annotation
Prunus mongolica Whole Genome v1.0 Assembly & Annotation
Prunus mume Tortuosa Genome v1.0 Assembly & Annotation
Prunus persica 124 Pan Genome v1.0 Assembly & Annotation
Prunus persica Chinese Cling Whole Genome v1.0 Assembly & Annotation
Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
Prunus persica Whole Genome v1.0 Assembly & Annotation
Prunus persica Zhongyoutao 14 Genome v1.0 Assembly & Annotation
Prunus salicina Lindl cv. Wushancuili Genome v1.0 Assembly & Annotation
Prunus salicina Sanyueli FAAS Whole Genome v1.0 Assembly & Annotation
Prunus salicina Sanyueli Whole Genome v2.0 Assembly & Annotation
Prunus salicina Zhongli No. 6 Whole Genome v1.0 Assembly & Annotation
Prunus sibirica CH320_5 Whole Genome v1.0 Assembly & Annotation
Prunus sibirica F106 Whole Genome v1.0 Assembly & Annotation
Prunus yedoensis var. nudiflora Genome v1.0 Assembly & Annotation
Pyrus betulifolia Genome v1.0 Assembly & Annotation
Pyrus bretschneideri ‘DangshanSuli’ Genome Assembly v1.1
Pyrus communis Bartlett DH Genome v2.0
Pyrus communis d'Anjou draft Genome v1.0 Assembly & Annotation
Pyrus communis d'Anjou Genome v2.3.a1 Assembly & Annotation
Pyrus communis Genome v1.0 Draft Assembly & Annotation
Pyrus pyrifolia Cuiguan Whole Genome v1.0 Assembly & Annotation
Pyrus pyrifolia Whole Genome v1.0 Assembly & Annotation
Pyrus ussuriensis x communis Zhongai 1 v1.0 Whole Genome Assembly & Annotation
Rosa chinensis Old Blush homozygous genome v2.0
Rosa chinensis Old Blush Illumina genome v1.0
Rosa chinensis Whole Genome v1.0 Assembly & Annotation
Rosa multiflora Draft Genome v1.0 Assembly & Annotation
Rosa rugosa Whole Genome v1.0 Assembly & Annotation
Rosa wichuraiana Basye's Thornless Genome v1.0 Assembly & Annotation
Rubus argutus Hillquist Genome v1.0 Assembly & Annotation
Rubus chingii Hu Whole Genome v1.0 Assembly & Annotation
Rubus idaeus Anitra Genome v1.0 Assembly & Annotation
Rubus idaeus cv. 'Autumn Bliss' NIAB Genome v1.0 Assembly & Annotation
Rubus idaeus cv. 'Malling Jewel' NIAB Genome v1.0 Assembly & Annotation
Rubus idaeus 'Joan J' Genome v2.0 Assembly & Annotation
Rubus L. subgenus Rubus Watson Genome v1.0 Assembly & Annotation
Rubus occidentalis Whole Genome Assembly v1.0 & Annotation v1
Rubus occidentalis Whole Genome Assembly v1.1
Rubus occidentalis Whole Genome v3.0 Assembly & Annotation
Rubus ulmifolius 'Burbank Thornless' Whole Genome v1.0 Assembly
 
 Germplasm : 24233 germplasm
 
 Fragaria : 3591
Germplasm TypeNumber of germplasm
breeding_research_material2015
cultivar1012
wild_unimproved533
population31
 
 Malus : 8335
Germplasm TypeNumber of germplasm
breeding_research_material3198
cultivar2705
wild_unimproved2261
population95
unselected_seedling57
selected_material14
panel5
 
 Prunus : 8309
Germplasm TypeNumber of germplasm
breeding_research_material4159
cultivar3511
wild_unimproved250
unselected_seedling237
population123
panel19
selected_material10
 
 Pyrus : 3779
Germplasm TypeNumber of germplasm
cultivar2280
wild_unimproved871
breeding_research_material597
TBD: stock type to be determined21
population7
rootstock3
 
 Rosa : 219
Germplasm TypeNumber of germplasm
cultivar190
population18
breeding_research_material9
wild_unimproved2
 
 Rubus : 1600
Germplasm TypeNumber of germplasm
cultivar504
breeding_research_material493
wild_unimproved368
accession227
population8
 
 Maps : 408 maps
GenusNumber of maps
Fragaria45
Malus124
Prunus198
Pyrus25
Rosa31
Rubus13
 
 Markers : 4475759 markers
 
 Fragaria : 645177
Marker TypeNumber of markers
SNP625966
Indel12044
EST-SSR4423
genetic marker1208
SSR1138
DArT131
AFLP110
dCAPS51
EST marker35
SSCP26
gene marker21
STS9
SCAR5
HRM5
KASP4
RFLP1
 
 Malus : 2655554
Marker TypeNumber of markers
SNP2647739
HaploBlock marker3433
SSR1586
AFLP977
DArT677
RAPD359
genetic marker185
EST marker167
EST-SSR159
RFLP129
gene marker31
Isozyme29
SCAR22
PCR marker18
candidate gene marker14
RGA10
CAPS7
SNP/Indel7
SNP_TSP3
Heritable Phenotypic Marker1
STS1
 
 Prunus : 546044
Marker TypeNumber of markers
Indel156379
SNP150898
CAPS131687
SSR94612
SLAF8862
AFLP1267
EST marker680
RFLP502
gene marker301
candidate gene marker261
RAPD143
EST-SSR133
genetic marker62
Isozyme43
RAF39
ISSR37
SRAP32
SCAR24
LTR22
dCAPS19
IMA16
STS9
overgo probe5
KASP4
PCR marker3
Heritable Phenotypic Marker2
SSLP1
SNP/Indel1
 
 Pyrus : 549638
Marker TypeNumber of markers
SNP445544
SSR102835
AFLP683
Indel557
IRAP8
STS5
Isozyme3
gene marker2
ISSR1
 
 Rosa : 79346
Marker TypeNumber of markers
SNP75733
AFLP2200
SSR620
CAPS234
NBS148
RAPD130
genetic marker106
RFLP52
gene marker49
RGA41
SSCP17
EST marker12
Heritable Phenotypic Marker2
SCAR2
 
 Rubus : 21464
Marker TypeNumber of markers
SNP20043
SSR577
AFLP529
candidate gene marker165
HRM115
gene marker18
EST-SSR16
genetic marker1
 
 Phenotypes : 503809 phenotypic measurements
SpeciesNumber of trait descriptorsNumber of phenotypic measurements
Fragaria bucharica524
Fragaria cascadensis29254
Fragaria chiloensis632904
Fragaria chinensis625
Fragaria corymbosa428
Fragaria daltoniana36
Fragaria gracilis24
Fragaria hybrid19104
Fragaria iinumae1253
Fragaria iturupensis328
Fragaria mandshurica24
Fragaria moschata45499
Fragaria moupinensis24
Fragaria nilgerrensis432
Fragaria nipponica528
Fragaria nubicola12
Fragaria orientalis744
Fragaria pentaphylla424
Fragaria sp.99198
Fragaria spp.1332
Fragaria tibetica36
Fragaria vesca1411770
Fragaria virginiana481453
Fragaria viridis1351
Fragaria x ananassa134145353
Fragaria x bifera720
Fragaria x bringhurstii22355
Fragaria x vescana1329
Malus angustifolia23379
Malus baccata421227
Malus brevipes4167
Malus coronaria411270
Malus doumeri11
Malus florentina4088
Malus floribunda37278
Malus fusca39709
Malus halliana39307
Malus honanensis1738
Malus hupehensis39528
Malus hybrid437789
Malus ioensis41729
Malus kansuensis23130
Malus mandshurica2376
Malus ombrophila1962
Malus orientalis21878
Malus orthocarpa1718
Malus prattii20196
Malus prunifolia41806
Malus pumila30246
Malus sargentii40457
Malus sieversii2223895
Malus sikkimensis23240
Malus spectabilis37157
Malus spp.39662
Malus sylvestris39488
Malus toringo23456
Malus toringoides21245
Malus transitoria18103
Malus trilobata11
Malus tschonoskii1719
Malus x adstringens1932
Malus x arnoldiana3992
Malus x asiatica21285
Malus x astracanica1616
Malus x atrosanguinea2340
Malus x dawsoniana4176
Malus x domestica278166549
Malus x hartwigii2090
Malus x magdeburgensis3686
Malus x micromalus37304
Malus x moerlandsii2239
Malus x platycarpa23139
Malus x purpurea42131
Malus x robusta41394
Malus x scheideckeri3258
Malus x soulardii2060
Malus x sublobata1768
Malus yunnanensis41356
Malus zhaojiaoensis1684
Malus zumi3680
Prunus americana1562
Prunus angustifolia428
Prunus argentea2880
Prunus armeniaca333318
Prunus avium4417389
Prunus bokhariensis1744
Prunus bucharica832
Prunus canescens11
Prunus cerasifera23650
Prunus cerasus3416313
Prunus consociiflora14
Prunus davidiana18270
Prunus domestica281324
Prunus dulcis485467
Prunus fasciculata410
Prunus ferganensis1982
Prunus ferganica1742
Prunus hortulana24
Prunus hybrid921110
Prunus japonica516
Prunus kansuensis718
Prunus kuramica728
Prunus maackii11
Prunus mexicana416
Prunus mira39233
Prunus mume1122
Prunus nigra36
Prunus pedunculata8186
Prunus persica6833164
Prunus petunnikowii764
Prunus rivularis818
Prunus salicina25472
Prunus simonii1636
Prunus spinosa8214
Prunus spp.761300
Prunus subcordata556
Prunus tangutica8184
Prunus tenella756
Prunus texana36
Prunus triloba728
Prunus undulata12
Prunus webbii28174
Prunus x blireiana620
Prunus x dasycarpa934
Pyrus betulifolia441144
Pyrus calleryana461832
Pyrus communis4923902
Pyrus cordata43289
Pyrus cossonii42141
Pyrus dimorphophylla41483
Pyrus elaeagrifolia48345
Pyrus fauriei45724
Pyrus gharbiana40117
Pyrus glabra1434
Pyrus hondoensis46616
Pyrus hybrid503533
Pyrus koehnei39181
Pyrus korshinskyi11
Pyrus mamorensis43166
Pyrus pashia40362
Pyrus pseudopashia1722
Pyrus pyrifolia482497
Pyrus regelii2269
Pyrus sachokiana11
Pyrus salicifolia44152
Pyrus spinosa37275
Pyrus spp.48218
Pyrus syriaca2095
Pyrus ussuriensis491303
Pyrus x bretschneideri37335
Pyrus x canescens11
Pyrus x complexa24
Pyrus x nivalis44225
Pyrus x phaeocarpa3847
Pyrus x sinkiangensis18
Pyrus x uyematsuana3650
Rubus acanthophyllos12
Rubus adenotrichos36
Rubus allegheniensis750
Rubus alumnus24
Rubus amphidasys48
Rubus anglocandicans36
Rubus apetalus12
Rubus arcticus952
Rubus argutus25122
Rubus armeniacus844
Rubus assamensis48
Rubus axillaris3064
Rubus bambusarum36
Rubus bogotensis14
Rubus briareus14
Rubus buergeri48
Rubus caesius31186
Rubus canadensis2680
Rubus canescens2246
Rubus caucasicus2864
Rubus chamaemorus114
Rubus chingii412
Rubus cissoides12
Rubus clinocephalus622
Rubus cockburnianus614
Rubus columellaris38
Rubus conothyrsoides410
Rubus corchorifolius316
Rubus coreanus1252
Rubus corylifolius36
Rubus crataegifolius25110
Rubus cyri48
Rubus deliciosus36
Rubus distractiformis36
Rubus drejeri2348
Rubus echinatus12
Rubus ellipticus412
Rubus enslenii12
Rubus erythrops410
Rubus eustephanos1238
Rubus flagellaris526
Rubus floribundus316
Rubus flosculosus2174
Rubus formosensis510
Rubus geoides26
Rubus georgicus48
Rubus glabratus310
Rubus glabricarpus12
Rubus glandithyrsos12
Rubus glandulosus36
Rubus glaucus532
Rubus grabowskii23108
Rubus hartmanii48
Rubus hawaiensis414
Rubus henryi1020
Rubus hirsutus21100
Rubus hirtus30168
Rubus hispidus48
Rubus hoffmeisterianus414
Rubus humulifolius24
Rubus hunanensis48
Rubus hybrid333258
Rubus hypargyrus48
Rubus ichangensis36
Rubus idaeus437659
Rubus ikenoensis410
Rubus illecebrosus1944
Rubus innominatus1340
Rubus insularis48
Rubus irenaeus622
Rubus irritans12
Rubus kawakamii12
Rubus kennedyanus12
Rubus laciniatus2972
Rubus lambertianus1250
Rubus lasiococcus1754
Rubus lasiostylus21116
Rubus leucodermis27216
Rubus lindebergii12
Rubus lineatus12
Rubus macilentus48
Rubus macraei12
Rubus macvaughianus414
Rubus megalococcus12
Rubus mesogaeus36
Rubus microphyllus524
Rubus minusculus48
Rubus miszczenkoi36
Rubus moluccanus38
Rubus moschus12
Rubus mulleri412
Rubus neglectus35310
Rubus neomexicanus1748
Rubus nepalensis412
Rubus nessensis12
Rubus nivalis36
Rubus niveus420
Rubus nubigenus312
Rubus nutkanus27216
Rubus occidentalis34692
Rubus odoratus2166
Rubus orarius12
Rubus palmatus522
Rubus parvifolius27286
Rubus parvus36
Rubus pectinellus414
Rubus pedatus520
Rubus pensilvanicus36
Rubus pentalobus510
Rubus phoenicolasius1348
Rubus plicatus2858
Rubus polyanthemos12
Rubus praecox24
Rubus pseudojaponicus36
Rubus pubescens410
Rubus pungens1536
Rubus pyramidalis36
Rubus rigidus1428
Rubus riograndis12
Rubus roseus36
Rubus rosifolius520
Rubus rugosus48
Rubus sachalinensis726
Rubus sanctus524
Rubus saxatilis510
Rubus schmidelioides38
Rubus separinus410
Rubus setchuenensis418
Rubus shankii2464
Rubus sieboldii12
Rubus simplex918
Rubus slesvicensis29178
Rubus spectabilis25176
Rubus spp.28226
Rubus squarrosus614
Rubus sumatranus1736
Rubus swinhoei36
Rubus taiwanicola36
Rubus tephrodes524
Rubus thibetanus48
Rubus trianthus48
Rubus tricolor36
Rubus trifidus1740
Rubus trivialis27182
Rubus tsangiorum48
Rubus tuberculatus12
Rubus ulmifolius24136
Rubus ursinus32296
Rubus urticifolius310
Rubus vermontanus12
Rubus vernus12
Rubus vestitus12
Rubus vigorosus12
Rubus wahlbergii2860
Rubus wallichianus36
Rubus x loganobaccus28122
 
 Publications : 11288 publications
 
 QTL : 8047 QTL and 124 MTL for 471 agronomic traits
 
 Fragaria 1429 QTL 5 MTL for 213 traits
Trait CategoryNumber of QTLsNumber of MTLs
1-decanol content80
1-hexanol content10
1-methylbutyl butanoate content20
1-methylhexyl acetate content10
1-methyloctyl butanoate content30
1-octanol content120
1-O-protocatechuyl-beta-xylose content60
1-penten-3-ol content20
1-penten-3-one content60
2,1-pentenyl furan content10
2,3-butanedioldi acetate content10
2-decenal content40
2-heptanol content10
2-heptanone content10
2-heptenal content60
2-hexen-1-ol content30
2-hexenal content10
2-hexenyl acetate content10
2-methylbutyl acetate content50
2-nonanol content30
2-nonanone content40
2-nonenal content10
2-octenal content30
2-pentanone content10
2-pentenal content30
2-pentylfuran content20
2-tridecanol content10
2-undecanol content30
3-hexenal content10
3-hexenyl acetate content10
3-methyl-2-butenyl acetate content20
3-methylbutyl acetate content100
6-methyl-5-hepten-2-one content60
acetone content20
acetophenone content40
Afzelechin-catechin dimers230
Afzelechin content160
Afzelechin-glucoside130
Afzelechin-pelargonidin-glucoside150
alpha farnesene content30
alpha ionone content10
alpha pinene content10
anthocyanin content280
benzaldehyde content20
benzyl acetate content110
beta ionone content10
branch number20
butyl acetate content90
butyl butanoate content80
butyl hexanoate content100
calyx position20
catechin content140
Catechin dimers120
chilling requirement01
Cinnamic acid- hexo content110
cinnamyl acetate content70
citric acid content60
Coumaric acid hexose content80
cyanidin 3-O-glucoside content80
Cyanidin hexose content50
decanal content10
decyl acetate content90
Di-hydroxybenzoic acid hexose content60
Di-hydroxy methyl benzoic acid hexose content80
Diosmetin acetylhexoside content60
D-limonene content10
dodecane content20
epicatechin content140
Eriodictyol hexose content100
ethanol content10
ethyl 2-hexenoate content10
ethyl acetate content10
ethyl butanoate content10
ethyl decanoate content40
ethyl dodecanoate content20
ethyl hexanoate content20
ethyl methylthioacetate content10
eugenol content50
Female fertility12
Ferulic acid hexose content140
Flavan-3-ols contant40
flavonoid content50
flower date first130
fructose content20
fruit circumference20
fruit dry weight30
fruit firmness170
fruit fresh weight120
fruit length140
fruit number60
Fruit position of maximum width30
fruit ripe 100%60
fruit set30
fruit shape100
fruit size30
fruit width110
fruit width to length ratio110
furaneol content10
gamma-decalactone content70
gamma-dodecalactone content60
geranio content10
glucose content50
heptanal content10
heptanol content10
hexanal content10
hexanol content20
hexyl acetate content40
hexyl butanoate content40
hexyl hexanoate content70
isoamyl hexanoate content10
isopropyl butanoate content10
Isopropyl hexanoate content20
Isorhamnetin glucuronide content50
Kaempferol acetylhexose content30
Kaempferol coumaroyl hexose content60
Kaempferol-coumaryl-glucoside200
Kaempferol-glucoside130
Kaempferol-glucuronide110
Kaempferol-glucuronide content40
Kaempferol-hexose content180
Kaempferol pentose hexose glucuronide content30
L-Ascorbic acid content430
L-ascorbic acid content in dry matter240
limonene content10
linalool content80
malic acid content40
m-Coumaric acid content100
mesifurane content70
methyl 2-aminobenzoate content20
methyl 2-hexenoate content10
methyl 3-hydroxyoctanoate content10
methyl 3-methylbutanoate content10
methyl anthranilate content30
methyl benzene acetate content20
methyl benzoate content100
methyl butanoate content50
methyl cinnamate content10
methyl decanoate content70
methyl dodecanoate content40
methyl E-2-hexenoate content10
methyl hexanoate content60
methyl nicotinate content10
methyl octanoate content60
methyl pentanoate content70
methyl salicylate content10
myrtenol content60
myrtenyl acetate content40
Naringenin chalcone hexose content60
nerol content30
nerolidol content90
nonanal content10
nonyl acetate content40
octanal content10
octanoic acid content20
octanol content10
octyl 3-methylbutanoate content20
octyl acetate content80
octyl butanoate content90
octyl hexanoate content100
Pelargonidin-3-glucoside-malonate content110
pelargonidin 3-O-glucoside content180
pelargonidin 3-O-rutinoside content290
Pelargonidin acetyl hexoside content90
Pelargonidin hexose content60
pentyl acetate content10
Perlargonidin malonyl hexose content50
perpetual flowering100
PH120
phenolic compound content150
plant height40
plant width30
pollen fertility12
procyanidins content380
Propelargonidin content360
propyl butanoate content40
Quercetin-acetylhexose content10
Quercetin-glucoronide content40
quercetin glucuronide content70
Quercetin hexose content10
Quercetin malonylhexose content60
Ratio total water soluble content to tritratable acidity10
relative antioxidant capacity160
resistance to Colletotrichum acutatum50
resistance to Fusarium oxysporum f. sp. fragariae20
resistance to Gloeosporium and Colletotrichum species10
resistance to Phytophthora cactorum50
resistance to powdery mildew1420
Root arbuscles10
Root convex area10
Root diameter30
Root growth density index40
Root length30
Root length distribution10
Root number30
Root perimeter20
Root vesicles10
Root volume10
runner20
rutinoside content40
Sesquiterpenoid hexose content120
Sinapic acid hexose content130
skin color300
Specific root length20
sucrose content20
terpineol content110
titratable acidity130
total water soluble content110
Triterpenoid-hexose content120
yield trait60
α-curcumene content20
α-terpineol content10
β-farnesene content20
β-pinene content10
 
 Malus 4102 QTL 52 MTL for 142 traits
Trait CategoryNumber of QTLsNumber of MTLs
2-methyl butyl acetate content30
3-octanol content10
allylanisol content40
alpha farnesene content50
base diameter20
base diameter increment80
basis angle of long sylleptic axillary shoots10
beta damascenone content20
bitter pit20
branch number20
bud break370
butanol content20
butyl 2-methyl butanoate content20
butyl acetate content30
butyl butanoate content40
butyl hexanoate content10
catechin content140
chilling requirement24680
chlorogenic acid content60
cord bending of long sylleptic axillary shoots20
cyanidin 3-O-arabinoside content50
date of green point190
dehydroascorbate content30
dehydroascorbate foliar content20
dry matter content330
epicatechin content160
ethylene production40
flower date 50%180
flower density20
flower first date20
fructose content120
fruit circumference40
fruit crispness80
fruit crunchiness20
fruit eating quality120
fruit fibrousness30
fruit firmness550
fruit firmness after storage510
fruit firmness of shaded side of the fruit100
fruit firmness of the sunny side of the fruit70
fruit flesh browning rate220
fruit flesh color01
fruit fresh weight290
fruit graininess30
fruit hardness100
fruit juiciness90
fruit length250
fruit mealiness60
fruit meltiness50
fruit number10
fruit ripe 100%20
fruit russet140
fruit russet calyx20
fruit russet pedicel40
fruit shape200
fruit size130
fruit stiffness80
fruit texture2340
fruit width260
gametophytic incompatibility01
glucose content160
glutathione content80
harvest date630
harvest index90
heptanol content10
hexanol content60
hexyl acetate content40
hexyl butanoate content30
hexyl hexanoate content50
internode length120
internode number70
Iso-pentanol content20
juice browning60
L-Ascorbic acid content180
L-ascorbic acid foliar content10
length of the longest internode of long sylleptic axillary shoots20
length of the longest internode of the trunk10
loss of firmness380
malic acid content30
mean internode length of long sylleptic axillary shoots10
number of axillary shoots40
number of brindles10
number of latents buds on the trunk20
number of long shoots20
number of spurs20
O-methyl transferase activity10
p-coumaroyl quinic acid content200
pentanol content10
pentyl acetate content20
percentage of long shoots10
phenolic compound content1090
phloridzin-xyloside content10
plant height increment240
plant surface10
plant volume10
preharvest fruit drop20
procyanidin B2 content110
propyl acetate content20
propyl hexanoate content10
quercetin 3-O-arabinofuranoside content10
quercetin 3-O-glucoside content20
quercetin 3-O-rutinoside content20
quercetin 3-O-xyloside content10
resistance to Agrobacterium tumefaciens01
resistance to Botryosphaeria dothidea637
resistance to chilling injury20
resistance to Dysaphis cf. devecta40
resistance to Dysaphis plantaginea51
resistance to Erwinia amylovora511
resistance to Neonectria ditissima200
resistance to Penicillium expansum20
resistance to powdery mildew360
resistance to Venturia inaequalis638
rooting rate30
rootstock-induced dwarfing30
seedling leaf size20
seedling stem diameter40
skin color101
soft scald50
soggy breakdown40
sorbitol content130
stem diameter150
stem length50
stem node number70
stomatal conductance50
sucrose content140
sugar content70
sugar content of shaded side of the fruit70
sugar content of the sunny side of the fruit80
time to maturity20
titratable acidity240
total growth rate100
total water soluble content130
transpiration rate60
tree growth habit01
unbranched upper zone of trunk10
unknown procyanidin oligomer 1 content40
unknown procyanidin oligomer 2 content40
unknown procyanidin oligomer 3 content30
unknown procyanidin oligomer 4 content50
unknown procyanidin oligomer 5 content60
volatile organic compounds content530
 
 Prunus 1938 QTL 40 MTL for 156 traits
Trait CategoryNumber of QTLsNumber of MTLs
abnormal growth after insufficient stratification10
aborting fruit01
amygdalin hydrolase activity30
anther color01
anthocyanin content30
ATP phosphofructokinase activity50
branch number20
bud break30
catechin content20
catechin epicatechin ratio40
chilling requirement1300
citrate content70
citric acid content70
cyanidin 3-O-glucoside content20
cyanidin 3-O-rutinoside content30
days to germination50
double flower01
ecodormancy release date40
endodormancy release date50
epicatechin content20
evergrowing01
flavan-3-ol-a content20
flavan-3-ol-b content20
flavonoid content50
flesh color around the stone/pit71
flower color22
flower date 100%590
flower date 50%1680
flower date first840
flower first date500
flower late in season41
flower shape02
fresh weight30
fructokinase activity160
fructose-1,6-bisphosphatase activity30
fructose content350
fruit chewiness40
fruit cohesiveness40
fruit cracking250
fruit development period420
fruit firmness450
fruit flavor trait10
fruit flesh adhesion141
fruit flesh color432
fruit fresh weight890
fruit gumminess60
fruit hardness80
fruit length110
fruit resilience20
fruit ripe 100%711
fruit shape31
fruit size60
fruit springiness20
fruit texture70
fruit thickness180
fruit width270
gametophytic incompatibility43
glucose content300
glucosyltransferase activity trait30
growing degree days for ecodormancy release230
hexokinase activity150
hybrid incompatibility01
internode length30
kernel diameter20
kernel length40
kernel spherical index10
kernel taste31
kernel thickness30
kernel weight10
kernel width20
leaf area20
leaf color21
leaf length40
leaf shape71
leaf vein density50
leaf vein number60
leaf width50
linoleic acid content20
loss of firmness280
malate content130
malic acid content80
mandelonitrile lyase activity20
neochlorogenic acid content50
neutral invertase activity20
non-acid fruit01
nut diameter20
nut length40
nut size20
nut spherical index40
nut thickness30
nut weight20
nut width30
oleic acid content20
palmitic acid content20
palmitoleic acid content40
p-coumaric acid content20
p-coumaroyl quinic acid content20
peonidin 3-O-glucoside content30
peonidin 3-O-rutinoside content30
period of time between endodormancy release and blooming50
petiole gland01
petiole length30
PH90
phenolic compound content30
phosphoglucomutase activity70
pistil death20
plant height11
pollen fertility01
pollen germination20
polycarpel01
proanthocyanidin B1 content20
protein content20
prunasin hydrolase activity40
quinic acid content10
Ratio total water soluble content to tritratable acidity40
relative antioxidant capacity30
resistance to chilling injury530
resistance to Dysaphis cf. devecta320
resistance to Meloidogyne arenaria61
resistance to Meloidogyne incognita32
resistance to Meloidogyne javanica01
resistance to Meloidogyne nematode01
resistance to Monilinia fructicola310
resistance to Myzus persicae91
resistance to peach tree short life syndrome90
resistance to plum pox virus362
resistance to powdery mildew871
resistance to Pseudomonas syringae pv. Syringae70
resistance to Xanthomonas arboricola pv. Pruni130
restistance to Candidatus Phytoplasma pruni40
seed set number30
seed size10
shell hardness61
skin color331
skin overcolor130
skin pubescence01
sorbitol content200
sorbitol oxidase activity20
stearic acid content50
stem diameter30
stem length20
stem taper50
stratification requirement20
sucrose content330
sugar content40
time to maturity600
titratable acidity310
tocopherol homologues content50
total fat content20
total water soluble content620
tree growth habit11
tree shape30
trunk annual net growth30
trunk diameter120
UDP-glucose pyrophosphorylase activity70
yield trait30
 
 Pyrus 47 QTL 3 MTL for 16 traits
Trait CategoryNumber of QTLsNumber of MTLs
fruit flesh color20
fruit fresh weight20
fruit juiciness20
fruit length30
fruit russet calyx20
fruit width30
gametophytic incompatibility01
leaf color01
pedicel length30
resistance to Cacopsylla pyri110
resistance to Venturia nashicola01
resistance to Venturia pirina40
seed number60
skin color40
skin texture20
total water soluble content30
 
 Rosa 421 QTL 17 MTL for 36 traits
Trait CategoryNumber of QTLsNumber of MTLs
anther color01
chlorophyll content80
double flower02
flower color02
flower date 50%10
flower date first20
flower diameter220
flower dry weight90
flower fresh weight30
gametophytic incompatibility01
geranyl acetate content02
internode length10
internode number80
leaf area80
leaf dry weight100
leaf size50
nerol content01
neryl acetate content01
perpetual flowering01
petal number182
petaloid number20
plant height50
presence of prickles, thorns, or spines31
prickles on the petiole01
resistance to Cercospora rosicola1310
resistance to Diplocarpon rosae641
resistance to Diplocarpon rosae defoliation100
resistance to powdery mildew511
shoot dry weight100
shoot habit60
specific leaf area80
stem angle20
stem diameter100
stem dry weight80
stem length60
total growth rate100
 
 Rubus 110 QTL 7 MTL for 32 traits
Trait CategoryNumber of QTLsNumber of MTLs
caffeic acid glucoside content40
caffeic acid unknown content20
cane pubescence01
catechin unknown content30
chilling requirement70
cyanidin 3-O-2G-glucosylrutinoside content90
cyanidin 3-O-2G-xylosylrutinoside content30
cyanidin 3-O-2G-xylosylrutinoside & cyanidin 3-O-rutinoside content40
cyanidin 3-O-glucoside content30
cyanidin 3-O-glucoside & cyanidin 3-O-sambubioside content50
cyanidin 3-O-rutinoside content50
cyanidin 3-O-sophoroside content110
floricane fruiting01
flower color20
fruit fresh weight40
fruit length10
fruit shape10
fruit size10
fruit texture130
p-coumaric glucoside content60
pelargonidin 3-O-glucoside content20
pelargonidin 3-O-glucosylrutinoside content30
pelargonidin 3-O-rutinoside content60
plant height01
presence of prickles, thorns, or spines22
quercetin 3-O-rutinoside content20
quercetin glucoside content20
quercetin glucuronide content30
quercetin unknown content40
resistance to Amphorophora agathonica01
resistance to Amphorophora idaei01
skin color20
 
 SNP Genotype : 140380 markers 137562679 genotypic measurements
Species TypeNumber of markersNumber of genotypic measurements
Fragaria iinumae175126
Fragaria x ananassa384137701603
Malus x domestica129137485100
Prunus armeniaca953515
Prunus avium49141217952
Prunus cerasus765331632
Prunus persica47636861429
Pyrus communis65232112152086
Pyrus x bretschneideri915656
Rosaceae Family Genera sp.5362144
Rubus spp.127231786436
 
 SSR Genotype : 889 markers 57522 genotypic measurements
Species TypeNumber of markersNumber of genotypic measurements
Malus x domestica29641305
Prunus armeniaca14218
Prunus avium36510168
Prunus cerasus164560
Prunus dulcis13
Prunus persica445159
Prunus salicina153
Pyrus pyrifolia227
Pyrus sp.229
Total88957522
 
 Haplotype Genotype : 561294 haplotype blocks 1122694 haplotype measurements
Species TypeNumber of haplotype haplotypeNumber of haplotype measurements
Malus x domestica447535895070
Prunus avium103873207746
Prunus cerasus72288
Prunus persica981419590
 
 Species : 2312 species
GenusNumber of species
Acaena25
Adenostoma1
Agrimonia14
Alchemilla101
Amelanchier36
Amygdalus6
Aphanes4
Arabidopsis1
Aremonia1
Argentina6
Aria4
Armeniaca1
Aronia6
Aruncus3
Bencomia5
Cannabis1
Cerasus2
Cercocarpus6
Chaenomeles3
Chamaebatia1
Chamaebatiaria1
Chamaecallis1
Chamaemeles1
Chamaemespilus1
Chamaerhodos4
Cliffortia149
Coleogyne1
Coluria2
Comarum2
Cormus1
Cotoneaster71
Crataegus113
Cydonia1
Dasiphora4
Dendriopoterium2
Dichotomanthes1
Docynia2
Docyniopsis1
Dryas8
Drymocallis6
Duchesnea1
Eriobotrya12
Eriolobus1
Exochorda3
Fallopia1
Fallugia1
Filipendula3
Fragaria54
Geum29
Gillenia2
Hagenia1
Hesperomeles2
Heteromeles1
Holodiscus3
Horkelia5
Horkeliella1
Ivesia11
Kageneckia3
Kelseya1
Kerria2
Lachemilla4
Leucosidea1
Lindleya1
Luetkea1
Lyonothamnus3
Malacomeles1
Maleae1
Malus114
Marcetella2
Margyricarpus3
Mespilus2
Neillia12
Neviusia2
null1
Oemleria1
Osteomeles3
Other species with WGS1
Pentactina1
Peraphyllum1
Petrophytum2
Phippsiomeles1
Photinia32
Physocarpus9
Pisum1
Polylepis24
Potaninia1
Potentilla143
Poterium2
Pourthiaea3
Prinsepia5
Prunus295
Prunus (and Cerasus)1
Pseudocydonia1
Purshia3
Pygeum8
Pyracantha5
×Pyronia1
Pyronia1
Pyrus58
Rhaphiolepis2
Rhodotypos1
Rosa225
Rosaceae2
Rosaceae Family Genera1
Rubus390
Sanguisorba15
Sarcopoterium1
Sibbaldia6
Sibbaldianthe3
Sibbaldiopsis1
Sibiraea4
Sieversia2
Solanum1
Sorbaria5
Sorbus86
Spenceria1
Spiraea55
Stranvaesia5
synthetic1
Taihangia1
Tetraglochin7
Torminalis2
Vauquelinia4
Waldsteinia1
Xerospiraea1
xPyronia1
xSorbopyrus1
 
 Transcripts
SourceNumber of features
Fragaria ananassa GDR RefTrans V174947
Fragaria Unigene v5.0contigs : 6226
singlets : 12008
Malus Unigene v5.0contigs : 25525
singlets : 60918
Malus x domestica GDR RefTrans V1482648
Prunus avium GDR RefTrans V1257186
Prunus persica GDR RefTrans V1168828
Prunus Unigene v5.0contigs : 10934
singlets : 22957
Pyrus GDR RefTrans V1.063681
Pyrus Unigene v5.0contigs : 259
singlets : 964
Rosaceae Family Unigene v5.0contigs : 33916
singlets : 166551
Rosa GDR RefTrans V1.040539
Rosa Unigene v5.0contigs : 1215
singlets : 3707
Rubus GDR RefTrans V137326
Rubus GDR RefTrans V244291
Rubus Unigene v5.0contigs : 359
singlets : 1734