MDC022718.183, MDC022718.183 (contig) Malus x domestica

Overview
NameMDC022718.183
Unique NameMDC022718.183
Typecontig
OrganismMalus x domestica (Apple)
Sequence length5335
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
MDP0000313668mRNAMDP0000313668:1852..4571 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
MDP0000313668_exon_1CDSMDP0000313668_exon_1:4238..4571 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
MDP0000313668_exon_2CDSMDP0000313668_exon_2:3823..3981 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
MDP0000313668_exon_3CDSMDP0000313668_exon_3:3604..3719 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
MDP0000313668_exon_4CDSMDP0000313668_exon_4:2676..2837 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
MDP0000313668_exon_5CDSMDP0000313668_exon_5:1852..2016 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1genetic_markerRosBREEDSNP_SNP_CA_1447290_Lg9_01339_MAF40_154165_exon1:4583..4583 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_1451072_Lg9_01339_MAF20_652059_exon2genetic_markerRosBREEDSNP_SNP_CT_1451072_Lg9_01339_MAF20_652059_exon2:801..801 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_GT_1446720_Lg9genetic_markerRosBREEDSNP_SNP_GT_1446720_Lg9:5153..5153 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CA_1447290_Lg9genetic_markerRosBREEDSNP_SNP_CA_1447290_Lg9:4583..4583 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_1447766_Lg9genetic_markerRosBREEDSNP_SNP_CT_1447766_Lg9:4107..4107 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_1447896_Lg9genetic_markerRosBREEDSNP_SNP_AC_1447896_Lg9:3977..3977 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_1448119_Lg9genetic_markerRosBREEDSNP_SNP_CT_1448119_Lg9:3754..3754 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_1448133_Lg9genetic_markerRosBREEDSNP_SNP_AC_1448133_Lg9:3740..3740 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AG_1448202_Lg9genetic_markerRosBREEDSNP_SNP_AG_1448202_Lg9:3671..3671 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_1448614_Lg9genetic_markerRosBREEDSNP_SNP_CT_1448614_Lg9:3259..3259 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_CT_1451072_Lg9genetic_markerRosBREEDSNP_SNP_CT_1451072_Lg9:801..801 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_1451118_Lg9genetic_markerRosBREEDSNP_SNP_AC_1451118_Lg9:755..755 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TG_1451346_Lg9genetic_markerRosBREEDSNP_SNP_TG_1451346_Lg9:527..527 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_AC_1451348_Lg9genetic_markerRosBREEDSNP_SNP_AC_1451348_Lg9:525..525 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
RosBREEDSNP_SNP_TC_1451743_Lg9genetic_markerRosBREEDSNP_SNP_TC_1451743_Lg9:130..130 .Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
chr9chromosomechr9:1449312..1454646 -Malus x domestica Whole Genome v1.0 Assembly & Annotationn/a
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
Sequences
The following sequences are available for this feature:

contig sequence

>MDC022718.183 ID=MDC022718.183; Name=MDC022718.183; organism=Malus x domestica; type=contig; length=5335bp
GTTGATGATGTCCTTGTGAATCACAAACCATGGGCTTCCCGAGTGCAAGA
TCCGTTGACTGGCTCCCATGTATTTGTATGTGCACATTGTAGTCGAGAAG
AATGGAATCGTGATAGTGCGCGTGTTCTCATTGATAAGTTCGAAGAGGAG
GCTGAGCTGCGAGGATGGACGAATCAGGTATTTGTTACTGCTTGCTATCA
CACTGGAGGCCACAATGGAAACTTGATTATCTACATCCCAGGTTCAGATG
GAAGTACAACAAGCTATTGGTAATATCCGGATCATAACAATTTAAAATTT
TTTCGTATTGCGATTGATGAAGGAGTTTGAATATTATGTATTATTAATTG
AAGGTATGGCTACGTCACTCCTGATGATGTGCCAGAATTTGATCAGCATA
TTGGGAAGGGAGAGATTATAGAACGACTTTGGAGGTTTGTACATTTTTGG
TTTGGCTTACTGTTTTGGATGAAATATTCACCGGATGGAAGCTTGTGTTG
TCATATTTTTCAATTGCTGATTATTTATAGTCTTGTATGATAGATTTATT
GATATAGAGTTACATTAACATGGAGGAACTTTTGTGGAGAAAGCACAAAA
GACTTGGATATAACTGCATTACCCTGTATATGTTTCTGATTTGTAATGTT
GTTGTGATTTGTTTATTAAGCTTGAACATACTTGTTCTTACTCAATTGCT
ATTGACGAAACTTTAAATAGCTGAACAGGAAATTCAATTTCATTCCTTAC
AGGGTCCAAATCGGAGCATCTTGTGATGAAGCTGAAAAAATTAATGACCC
GAAGCTTCCAAATGGAGGAGAAAGTAAGAAAATCGAGGAGATGCCCCAAG
GAAACGGCAATTGGATTGAGAATAATGAGAACTTTTCAGGCTGTTGCCAA
AGCTCAAGAGTTTGGTCGAGATCATCGTCCACTGCTGATCTCTGCAAGCA
TCTCCTCCACCAGCCTCAATGGTGTTGTACTCGTCCAAGGGCTGGATTAC
GAGAGCATTAGGCGGGCTTTTTCTCTCTGGAATGGATATTCCTTACTGGT
TCACCTATGTCGTGAATGAGGATGAAACTATCAAATTTGAAGTGCGGCAA
AGGACTGCTGTTAATATAAGAGGGTTGGCTGTGTGCATAGTTTATTCCGG
GGACCACTCCGGCTGTACTGGGTCTCTATGCATTCATGTTGTTAATCATT
CCCAGCGAACTCATTTTGTCATTTCGCCAATTGTGGCCACCGTAACTGCC
TCCCATGAATGTCATCTTTGGCTGGGACATCTTTCAAACAAGAAGCTGAA
TCCGAAGGCGGCAACGTGGTTTTTGTAACAGCAGACTTTAATTAAAGGAG
CAGAGGATGATCATCAAATTAAGGTGAAGAAAACTGGAGTGGGTATCACA
GAATGTCATTTGTCTGATGGAATTCTAGAATATGATCTTTCATATATAGA
GTTTAAGGGCGTGGACTATGAGCGTGTACCGTATGAGTATGGCGACGATA
CTGATGACGAGGACTATCAGACATAAACTGATGAAAGAGATTGTTGACGT
TGCAGACAGAGTTAAGCCAGCCATCACTCATCTAACGATGAGGTACCCTA
AACCTAAACTCATCTTATGAGTTTGTTAATTGATTTGAATATTGAAAGCA
TTACAATTGATGTTTGAGATTGGTCATCGTAAGACCCAGATCGAATTTGG
TTACTACTAAGGAAGTTGGAGTTTATTTGAATTACCAGTTACTGTATATC
ATGCGTTGTCAAGTATATCGTGCAATGAGGTTTTTTTTTTTTTGAAAAGA
AAGCGCTGTATTTAAAAGCCGGGATGCGGTTCGGGTCGCGGTGTGAACGG
GTCAAGGAACGGGGGTCCGGGTTGAGTGCCTCACACTTCTCTCATGTCTC
TCCTGCTCTTCTTTCTGATTGGGCAGTCCCCCTTCACCTTTCTCGCCTTT
CTCTTCTCTTCTTTCCATCACAGCCACACACGTGGCTTCATCACCACCCT
TCCTGCTCCAGCAAAGCTGGAGGCTTCGGGATTTGAAGATCAAAATTGCT
TAAATGTTCTTGACTTTAATCGTTTACATCTCTCTCATTATAATTCCGTT
TCACGAACGGTTTTCGCCTATCCGTTTGTGAGACCGAGCTCTATTTGAAA
TCATTATTATTATGACCTCGAAAGGTCTACGAATTTTAAAAGATTAATTA
CAGAACTTCATACCTGTAACCAGTGGCGGATCCAGGAAATAATGTTTGTG
GGGTCATAGCGCGCGCAGCGCGAAATTTTTTTTTAACCTCGTTTGGTACT
TCGGACTGTACTGACTATTTCAGTCGGATAAGATAAATAGTCGTCGGATA
GTACTAACTCCATTAGTCGGGCGTTTGGTGCAGTGTCGGATAAGTTAAAT
GGCTTTAATACATAGCTGATACAGTTTCTACCAAACTACTGCATGCAACA
CAGGAGAAGAGAAAAGAATTAAAAGATACAAAAATTATGGCAATTGAATT
TCTACCAGCACGCATAGATTAAGCATCCCCGCTCGATCTGTCTTCTCTTC
TAACTCTTTCATCTTCCAARACGTAGAAAATTGATGACGCTTACRCCATG
GAAAGAATGGAACTGGAAARAAAAAAAAACCCGAAAACAGTTTTGTATTA
ATCAACTCTTGAGCTTAGTCTTCACYTTTGTCACAATTCTGTCACTACCG
CTTTTACTCTTGTTACTCTTATTCCTCTTTYTCTGTTTCTGTTTCTTTCC
ACTCTGTTTGTGATCCTCTACTTTTCCTTGAGGATTCACCTCCTCAAACT
CGAGCGGTCTTATAATTACACCGGGTCTCTTCATCACCTGCACACAATTG
CATTTAAGGTGAGGAATGAGAAGCGCCATAGCATCCAACATCCGGCTTAG
GGAAACAAAAGACGGATCAAATGTGGTATTGCAGAAKTCATCAATGGATG
CAAACTCAAGCATATCCGTATGGCATAGTAATAGCTTGCTTCTTCTTCTT
CCTCTTCCTGCAGTGCCGAGCTTCGTTCAGGATTTTTGTCGAACACTTGG
CGTGTGACTCCGACCCCGACGACCCCAGCTCCAAGAGGTCGCGTATGGGA
GCTTCAAGGTTGTTTCCATGCTTTCCAAGGGGTCGTGCGACCCCGACGAC
CCCACTGTGGATCCGCCCCTGCGTGCGACCCCGACGACCCCACTGTGGAT
CCGCCCCTGCACCTTGTGTGGAGCTTTTCGATAGCCGTTTTACTGCTATT
TCATGTCCGTTACCAAGTGTGCCCTACAATATGTAATGCGAACTAATTAA
GCAGTAAGCGTTGTAAATATTATTAATTATGTAGTATAATATGTAATGAA
AACTAATTAAGATCATTTAGTCAATCAATTATAGTAAATAGATAAACAGT
TCATAATATATATATATATATACCTACCTATTTTGACCTTTTGATTTTAT
ACACTTCGATGCGTAAACGATCATTTTTTTTTTTTTGTGCATTAATATTT
TTTCACATAGCGATGATCAGGAACTGTTTTCGCGTAGGAATGCCTTTTTA
ATTTTGTGGAGCGAAGGATCTCATGCAAATAAATATTTTCATTCCTTGAA
AACGGCACCAAATCCTCCTTCACCTAATTTGTTATCATCTGAAAACTTGT
TCGTGGCAGTTTCAATAGTTTCCAATCTAAATTGCAAAGACTCGACAGTC
TTCTTCATATCATTACCAACTACAAACATTGACTCAAAATATTAGATGTC
TTAGATAAAAAATTTATTAAGAAATTGAAGTAATATATAAATACTTTTCA
AATCTTTTTATTAATTAATTACCTTTTTTCTTTTGTCGTTTGGAGTGGTA
TCTCTCTTTGACTGTTCTGAGTCTCTTGCGAAAGAAGCATCCGGCCACAA
CCACAACCACAACTAACGAACAGAAAGCAACTGAACCAAGAGTACCAACG
ATGATTATCATCGATGAGGGTTTGCTTCTTCCTGTATGAATACAAAATTA
TAACAAATATATATCTCTGGGTGGGGCTACCTAACAATAATCAAAGAGCT
AATCGATTTTTATTTTGATTATTTGCTGTAAGAATCATCCTTAAAGGAGA
ATTTAAGAATGAACGATTCATATTTTTACGTCGTGAGATGAAACTCAACA
CGGTGATTTGTGGCATATGAAATTATATACGAGCAATTTTTATCAGTCAC
AAGAATTGTAGAAAGCTTGAAGGATATCATCATTTACCAGATCTGTTTGT
CATGAAGGTTGGCGGCGACGGCGGCAGCAACACCGGCGACGACACCGTCA
CCGGTGCCGATGAAGTCACCGACGCTGTCGCTGTCGCTGTCGCCGGCGCC
GACGCATTCGCTGTTGCCGTCGCCGTCGCCAACGCCCTCACAACCGTTAC
CGGCGGCAACGCAGACAGAGGCTGATTAGGTGGCAGTGACGACGGTGTGG
TGGCATTTAAAGAGATGGTAAGGGTGCGGCGGGAGCTTCTTGCGTAGGGA
TCGTTGATGACATCTGTGGTAGTTCTGGGCAATGCAATAAGAAGTAAGGA
GAGAACGTAGAAAGGGATCATGTCACATTGCAGGGAAAAACCTAGGGATT
TTGATAAGAGAATTAATTCGTTCAAGTTTTGCTAAAATTTCTAAGTTACG
AGTTTGTAACAAAGTCAATGCACGCGACGCTTGACTGACTTCACTCCTGA
GTCAACGTCGAAGCAGACTAGAATCAAAGGCTCACAGAGAACCACGTGGA
TAGGAACTAGGGGAGCTGGTGAACAGCTCACAGGTTGGACAATAAAAAAC
AAAACAAATCCAAGAACGGTTTTTTTTTGTTTTTTGGGTATACCGCTCCC
CAGTAGTTCCTATCTGCTGGGCTTCAAATAGGGCGCAAACCCTTTTGCAA
TTGTTGAATGGGCAGCTGCAACCCAATTACCTCCTATTTTGTGAATTGTT
AGAGAAGTATTTTTTGGGATGAAAGGCAACTCAACTTTCTCTTGTAATTC
GGTGACCGGTAGAGATGCTCTTATTATGGAATCCGAATTCTCTTCGGATC
TTTTTTGTAAGGATTTCGAGAATTTGTGAATTGTGTCTGTTCATTATATA
TTGTGCGATCATAAATCATTTTAATTTTTTTATTTACAATTGAATATACA
AACTGTATCTGACGAAAACTAATCGCACAATATGATAAACGAACATAATT
TATAGATTCCTAGAATCTTCACGAAGAATCCGGAAAAGATCTTAGCATAT
TATGTACTCAAGATAATGCATGCTAATCATTTTACGTTACAGCCAGCCCA
CACAGCACCGATCACCAACACTGATTGAGCATAAA
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