GWAS0000205 | GDR

Annotated Terms

Genome Location

GWAS Overview


GWAS Label	GWAS0000205 [ MapViewer ]
Published Symbol	Blush_2010
Trait Name	skin blush coverage
Trait Alias	N/A
GWAS Marker	SNP_IGA_259741
GWAS Study	Peach-fruit_quality-GWAS-Linge-2021
Genome Assembly	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
Statistical Mothod	FASTmrMLM
Experimental Model	N/A
GWAS Panel	Fresh_Market_Peach_AR_SC_TX_620
LOD	4.43
P Value	6.2762466128002E-6
R2	11.96
Unique key	3510-Blush_2010SNP_IGA_2597415.2023FASTmrMLM
Effect	0.7401
MAF	0.0906
Comments	N/A

Annotated Terms

The following terms have been associated with this GWAS:

Vocabulary: **Rosaceae Trait Ontology**
Term	Definition
28:percent blush	skin blush coverage

Genome Location


Name	Type	Location	Analysis	MapViewer
scaffold_2	supercontig	scaffold_2:14649165..14649165	Prunus persica Whole Genome v1.0 Assembly & Annotation	View
Pp02	chromosome	Pp02:17427335..17427335	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)	View

Publications


Year	Publication
2021	da Silva Linge Cassia, Cai Lichun, Fu Wanfang, Clark John, Worthington Margaret, Rawandoozi Zena, Byrne David H., Gasic Ksenija. Multi-Locus Genome-Wide Association Studies Reveal Fruit Quality Hotspots in Peach Genome. Frontiers in Plant Science 25 February 2021; https://doi.org/10.3389/fpls.2021.644799

Germplasm


Stock Name	Type
Fresh_Market_Peach_AR_SC_TX_620	panel